RNA–Protein interactions for RNA: ENST00000523985.5

CCNC-217, Transcript of cyclin C, humanhuman

TSL 2 BASIC

Gene CCNC, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-217ENST00000523985 ABCC4O15439 1325 aa18.33■□□□□ 0.53
CCNC-217ENST00000523985 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
CCNC-217ENST00000523985 ARFGEF2Q9Y6D5 1785 aa18.32■□□□□ 0.52
CCNC-217ENST00000523985 F6X3S4 739 aa18.32■□□□□ 0.52
CCNC-217ENST00000523985 RARSP54136 660 aaKnown RBP18.32■□□□□ 0.52
CCNC-217ENST00000523985 RPS8P62241 208 aaKnown RBP18.32■□□□□ 0.52
CCNC-217ENST00000523985 SUPT20HQ8NEM7 779 aa18.32■□□□□ 0.52
CCNC-217ENST00000523985 IPO8O15397 1037 aaKnown RBP18.31■□□□□ 0.52
CCNC-217ENST00000523985 API5Q9BZZ5 524 aaKnown RBP18.31■□□□□ 0.52
CCNC-217ENST00000523985 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 GRM8O00222 908 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 CTSWP56202 376 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 RASSF7Q02833 373 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 DPY19L2Q6NUT2 758 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 SLC4A10Q6U841 1118 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 UBE3BQ7Z3V4 1068 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 TTLL11Q8NHH1 800 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
CCNC-217ENST00000523985 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
CCNC-217ENST00000523985 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
CCNC-217ENST00000523985 CSF1RP07333 972 aa18.29■□□□□ 0.52
CCNC-217ENST00000523985 CASP7P55210 303 aa18.29■□□□□ 0.52
CCNC-217ENST00000523985 RTFDC1Q9BY42 306 aaPredicted RBP18.29■□□□□ 0.52
CCNC-217ENST00000523985 GPBP1L1Q9HC44 474 aaPredicted RBP18.29■□□□□ 0.52
CCNC-217ENST00000523985 HDAC5Q9UQL6 1122 aa18.29■□□□□ 0.52
CCNC-217ENST00000523985 COL11A2P13942 1736 aaPredicted RBP18.29■□□□□ 0.52
CCNC-217ENST00000523985 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
CCNC-217ENST00000523985 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
CCNC-217ENST00000523985 MPNDQ8N594 471 aa18.28■□□□□ 0.52
CCNC-217ENST00000523985 SLX4Q8IY92 1834 aa18.28■□□□□ 0.52
CCNC-217ENST00000523985 UTYO14607 1347 aa18.27■□□□□ 0.52
CCNC-217ENST00000523985 DPP8Q6V1X1 898 aaPredicted RBP18.27■□□□□ 0.52
CCNC-217ENST00000523985 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
CCNC-217ENST00000523985 NOB1Q9ULX3 412 aaKnown RBP18.27■□□□□ 0.52
CCNC-217ENST00000523985 TNRC6CQ9HCJ0 1690 aaKnown RBP18.27■□□□□ 0.52
CCNC-217ENST00000523985 IARSP41252 1262 aaKnown RBP18.26■□□□□ 0.51
CCNC-217ENST00000523985 ANKRD18AQ8IVF6 992 aa18.26■□□□□ 0.51
CCNC-217ENST00000523985 JARID2Q92833 1246 aaPredicted RBP18.26■□□□□ 0.51
CCNC-217ENST00000523985 CELF1Q92879 486 aaKnown RBP18.26■□□□□ 0.51
CCNC-217ENST00000523985 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
CCNC-217ENST00000523985 GLTPD2A6NH11 291 aa18.25■□□□□ 0.51
CCNC-217ENST00000523985 PRELPP51888 382 aa18.25■□□□□ 0.51
CCNC-217ENST00000523985 BSDC1Q9NW68 430 aaPredicted RBP18.25■□□□□ 0.51
CCNC-217ENST00000523985 PODXL2Q9NZ53 605 aa18.25■□□□□ 0.51
CCNC-217ENST00000523985 SNED1Q8TER0 1413 aa18.24■□□□□ 0.51
CCNC-217ENST00000523985 OLFM4Q6UX06 510 aa18.24■□□□□ 0.51
CCNC-217ENST00000523985 SEC31BQ9NQW1 1179 aa18.24■□□□□ 0.51
CCNC-217ENST00000523985 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
CCNC-217ENST00000523985 FOXO4P98177 505 aa18.23■□□□□ 0.51
CCNC-217ENST00000523985 EYA3Q99504 573 aa18.23■□□□□ 0.51
CCNC-217ENST00000523985 ZNF277Q9NRM2 450 aaPredicted RBP18.23■□□□□ 0.51
CCNC-217ENST00000523985 FZD9O00144 591 aa18.22■□□□□ 0.51
CCNC-217ENST00000523985 IFIT5Q13325 482 aaKnown RBP18.22■□□□□ 0.51
CCNC-217ENST00000523985 GREM2Q9H772 168 aa18.22■□□□□ 0.51
CCNC-217ENST00000523985 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
CCNC-217ENST00000523985 FER1L6Q2WGJ9 1857 aa18.22■□□□□ 0.51
CCNC-217ENST00000523985 ANKRD18BA2A2Z9 1011 aa18.21■□□□□ 0.51
CCNC-217ENST00000523985 ITGA6P23229 1130 aa18.21■□□□□ 0.51
CCNC-217ENST00000523985 LARGE2Q8N3Y3 721 aa18.21■□□□□ 0.51
CCNC-217ENST00000523985 USP44Q9H0E7 712 aa18.21■□□□□ 0.51
CCNC-217ENST00000523985 KIAA2012Q0VF49 1180 aa18.2■□□□□ 0.5
CCNC-217ENST00000523985 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
CCNC-217ENST00000523985 INTS3Q68E01 1043 aaKnown RBP18.2■□□□□ 0.5
CCNC-217ENST00000523985 ATF7IPQ6VMQ6 1270 aa18.2■□□□□ 0.5
CCNC-217ENST00000523985 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
CCNC-217ENST00000523985 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
CCNC-217ENST00000523985 ANKIB1Q9P2G1 1089 aa18.2■□□□□ 0.5
CCNC-217ENST00000523985 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
CCNC-217ENST00000523985 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
CCNC-217ENST00000523985 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
CCNC-217ENST00000523985 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
CCNC-217ENST00000523985 EIF6P56537 245 aaKnown RBP18.19■□□□□ 0.5
CCNC-217ENST00000523985 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
CCNC-217ENST00000523985 ZKSCAN2Q63HK3 967 aa18.19■□□□□ 0.5
CCNC-217ENST00000523985 LMBR1LQ6UX01 489 aa18.19■□□□□ 0.5
CCNC-217ENST00000523985 CCDC85AQ96PX6 553 aaPredicted RBP18.19■□□□□ 0.5
CCNC-217ENST00000523985 XDHP47989 1333 aa18.19■□□□□ 0.5
CCNC-217ENST00000523985 LAMB2P55268 1798 aa18.18■□□□□ 0.5
CCNC-217ENST00000523985 BCAR3O75815 825 aa18.18■□□□□ 0.5
CCNC-217ENST00000523985 ATP2B4P23634 1241 aa18.18■□□□□ 0.5
CCNC-217ENST00000523985 GPSM2P81274 684 aa18.18■□□□□ 0.5
CCNC-217ENST00000523985 RABL6Q3YEC7 729 aaPredicted RBP18.18■□□□□ 0.5
CCNC-217ENST00000523985 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
CCNC-217ENST00000523985 ZNRF3Q9ULT6 936 aa18.18■□□□□ 0.5
CCNC-217ENST00000523985 MINPP1Q9UNW1 487 aa18.18■□□□□ 0.5
CCNC-217ENST00000523985 C6orf229H3BNL8 230 aa18.17■□□□□ 0.5
CCNC-217ENST00000523985 MS4A1P11836 297 aa18.17■□□□□ 0.5
CCNC-217ENST00000523985 GPC2Q8N158 579 aa18.17■□□□□ 0.5
CCNC-217ENST00000523985 TBC1D16Q8TBP0 767 aa18.17■□□□□ 0.5
CCNC-217ENST00000523985 ZNF526Q8TF50 670 aaPredicted RBP18.17■□□□□ 0.5
CCNC-217ENST00000523985 L3MBTL3Q96JM7 780 aaPredicted RBP18.17■□□□□ 0.5
CCNC-217ENST00000523985 ZC3H12CQ9C0D7 883 aaKnown RBP18.17■□□□□ 0.5
CCNC-217ENST00000523985 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
CCNC-217ENST00000523985 LEMD3Q9Y2U8 911 aa18.17■□□□□ 0.5
CCNC-217ENST00000523985 SBF1O95248 1867 aa18.17■□□□□ 0.5
CCNC-217ENST00000523985 IQCA1LA6NCM1 817 aa18.16■□□□□ 0.5
CCNC-217ENST00000523985 GNAI3P08754 354 aa18.16■□□□□ 0.5
CCNC-217ENST00000523985 TRIM27P14373 513 aa18.16■□□□□ 0.5
CCNC-217ENST00000523985 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
CCNC-217ENST00000523985 FRAT1Q92837 279 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms