RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 TAOK3Q9H2K8 898 aa15.91■□□□□ 0.14
VEGFA-225ENST00000523950 DICER1Q9UPY3 1922 aaKnown RBP15.91■□□□□ 0.14
VEGFA-225ENST00000523950 ZC3H4Q9UPT8 1303 aaKnown RBP15.91■□□□□ 0.14
VEGFA-225ENST00000523950 CCDC88AQ3V6T2 1871 aa15.91■□□□□ 0.14
VEGFA-225ENST00000523950 RTL9Q8NET4 1388 aa15.9■□□□□ 0.14
VEGFA-225ENST00000523950 NFKBIEO00221 500 aa15.9■□□□□ 0.14
VEGFA-225ENST00000523950 LMNB1P20700 586 aa15.9■□□□□ 0.14
VEGFA-225ENST00000523950 SLC4A10Q6U841 1118 aa15.9■□□□□ 0.14
VEGFA-225ENST00000523950 UBE3BQ7Z3V4 1068 aa15.9■□□□□ 0.14
VEGFA-225ENST00000523950 ARHGAP45Q92619 1136 aa15.9■□□□□ 0.14
VEGFA-225ENST00000523950 SNED1Q8TER0 1413 aa15.9■□□□□ 0.14
VEGFA-225ENST00000523950 LRRC37AA6NMS7 1700 aa15.9■□□□□ 0.14
VEGFA-225ENST00000523950 UTRNP46939 3433 aa15.89■□□□□ 0.13
VEGFA-225ENST00000523950 GRM8O00222 908 aa15.89■□□□□ 0.13
VEGFA-225ENST00000523950 CASP7P55210 303 aa15.89■□□□□ 0.13
VEGFA-225ENST00000523950 CTSWP56202 376 aa15.89■□□□□ 0.13
VEGFA-225ENST00000523950 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
VEGFA-225ENST00000523950 ATP6V0A2Q9Y487 856 aa15.89■□□□□ 0.13
VEGFA-225ENST00000523950 IPO8O15397 1037 aaKnown RBP15.88■□□□□ 0.13
VEGFA-225ENST00000523950 FKBP4Q02790 459 aaKnown RBP eCLIP15.88■□□□□ 0.13
VEGFA-225ENST00000523950 RASSF7Q02833 373 aa15.88■□□□□ 0.13
VEGFA-225ENST00000523950 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
VEGFA-225ENST00000523950 SP8Q8IXZ3 490 aa15.88■□□□□ 0.13
VEGFA-225ENST00000523950 PSMD1Q99460 953 aa15.88■□□□□ 0.13
VEGFA-225ENST00000523950 C9orf78Q9NZ63 289 aaPredicted RBP15.88■□□□□ 0.13
VEGFA-225ENST00000523950 NOB1Q9ULX3 412 aaKnown RBP15.88■□□□□ 0.13
VEGFA-225ENST00000523950 TAF1P21675 1872 aa15.88■□□□□ 0.13
VEGFA-225ENST00000523950 TIAM2Q8IVF5 1701 aa15.88■□□□□ 0.13
VEGFA-225ENST00000523950 CCT4P50991 539 aaKnown RBP15.87■□□□□ 0.13
VEGFA-225ENST00000523950 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
VEGFA-225ENST00000523950 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
VEGFA-225ENST00000523950 UTYO14607 1347 aa15.87■□□□□ 0.13
VEGFA-225ENST00000523950 TTLL11Q8NHH1 800 aa15.86■□□□□ 0.13
VEGFA-225ENST00000523950 CDC5LQ99459 802 aaKnown RBP15.86■□□□□ 0.13
VEGFA-225ENST00000523950 CSF1RP07333 972 aa15.85■□□□□ 0.13
VEGFA-225ENST00000523950 RPS8P62241 208 aaKnown RBP15.85■□□□□ 0.13
VEGFA-225ENST00000523950 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
VEGFA-225ENST00000523950 SUPT20HQ8NEM7 779 aa15.84■□□□□ 0.13
VEGFA-225ENST00000523950 VPS33BQ9H267 617 aa15.84■□□□□ 0.13
VEGFA-225ENST00000523950 BCAR3O75815 825 aa15.83■□□□□ 0.12
VEGFA-225ENST00000523950 PRELPP51888 382 aa15.83■□□□□ 0.12
VEGFA-225ENST00000523950 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
VEGFA-225ENST00000523950 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
VEGFA-225ENST00000523950 ANKRD18AQ8IVF6 992 aa15.83■□□□□ 0.12
VEGFA-225ENST00000523950 ZNF784Q8NCA9 323 aaPredicted RBP15.83■□□□□ 0.12
VEGFA-225ENST00000523950 RTFDC1Q9BY42 306 aaPredicted RBP15.83■□□□□ 0.12
VEGFA-225ENST00000523950 SEC31BQ9NQW1 1179 aa15.83■□□□□ 0.12
VEGFA-225ENST00000523950 LTBP1Q14766 1721 aa15.82■□□□□ 0.12
VEGFA-225ENST00000523950 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
VEGFA-225ENST00000523950 FOXO4P98177 505 aa15.82■□□□□ 0.12
VEGFA-225ENST00000523950 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
VEGFA-225ENST00000523950 MPNDQ8N594 471 aa15.82■□□□□ 0.12
VEGFA-225ENST00000523950 GREM2Q9H772 168 aa15.82■□□□□ 0.12
VEGFA-225ENST00000523950 HDAC5Q9UQL6 1122 aa15.82■□□□□ 0.12
VEGFA-225ENST00000523950 COL4A1P02462 1669 aa15.82■□□□□ 0.12
VEGFA-225ENST00000523950 SPEF2Q9C093 1822 aa15.82■□□□□ 0.12
VEGFA-225ENST00000523950 NBPF7P0C2Y1 421 aaPredicted RBP15.81■□□□□ 0.12
VEGFA-225ENST00000523950 TRIM27P14373 513 aa15.81■□□□□ 0.12
VEGFA-225ENST00000523950 INTS3Q68E01 1043 aaKnown RBP15.81■□□□□ 0.12
VEGFA-225ENST00000523950 DPP8Q6V1X1 898 aaPredicted RBP15.81■□□□□ 0.12
VEGFA-225ENST00000523950 CCDC85AQ96PX6 553 aaPredicted RBP15.81■□□□□ 0.12
VEGFA-225ENST00000523950 USP44Q9H0E7 712 aa15.81■□□□□ 0.12
VEGFA-225ENST00000523950 DUOX1Q9NRD9 1551 aa15.8■□□□□ 0.12
VEGFA-225ENST00000523950 KDM2BQ8NHM5 1336 aa15.8■□□□□ 0.12
VEGFA-225ENST00000523950 ANKRD18BA2A2Z9 1011 aa15.8■□□□□ 0.12
VEGFA-225ENST00000523950 ITGA6P23229 1130 aa15.8■□□□□ 0.12
VEGFA-225ENST00000523950 IGHMBP2P38935 993 aaKnown RBP15.8■□□□□ 0.12
VEGFA-225ENST00000523950 IFIT5Q13325 482 aaKnown RBP15.8■□□□□ 0.12
VEGFA-225ENST00000523950 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
VEGFA-225ENST00000523950 FRAT1Q92837 279 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-225ENST00000523950 ZNF277Q9NRM2 450 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-225ENST00000523950 BSDC1Q9NW68 430 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-225ENST00000523950 RABL6Q3YEC7 729 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-225ENST00000523950 LMBR1LQ6UX01 489 aa15.79■□□□□ 0.12
VEGFA-225ENST00000523950 SUCLG2Q96I99 432 aa15.79■□□□□ 0.12
VEGFA-225ENST00000523950 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
VEGFA-225ENST00000523950 CCDC57Q2TAC2 916 aa15.78■□□□□ 0.12
VEGFA-225ENST00000523950 EPHA10Q5JZY3 1008 aa15.78■□□□□ 0.12
VEGFA-225ENST00000523950 DPY19L2Q6NUT2 758 aa15.78■□□□□ 0.12
VEGFA-225ENST00000523950 JDP2Q8WYK2 163 aa15.78■□□□□ 0.12
VEGFA-225ENST00000523950 KAZALD1Q96I82 304 aa15.78■□□□□ 0.12
VEGFA-225ENST00000523950 MPHOSPH8Q99549 860 aa15.78■□□□□ 0.12
VEGFA-225ENST00000523950 GPBP1L1Q9HC44 474 aaPredicted RBP15.78■□□□□ 0.12
VEGFA-225ENST00000523950 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
VEGFA-225ENST00000523950 XDHP47989 1333 aa15.77■□□□□ 0.12
VEGFA-225ENST00000523950 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
VEGFA-225ENST00000523950 UBTFL1P0CB47 393 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-225ENST00000523950 LARGE2Q8N3Y3 721 aa15.77■□□□□ 0.12
VEGFA-225ENST00000523950 EYA3Q99504 573 aa15.77■□□□□ 0.12
VEGFA-225ENST00000523950 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
VEGFA-225ENST00000523950 PPIP5K2O43314 1243 aa15.76■□□□□ 0.11
VEGFA-225ENST00000523950 GNAI3P08754 354 aa15.76■□□□□ 0.11
VEGFA-225ENST00000523950 MS4A1P11836 297 aa15.76■□□□□ 0.11
VEGFA-225ENST00000523950 GPSM2P81274 684 aa15.76■□□□□ 0.11
VEGFA-225ENST00000523950 KIAA2012Q0VF49 1180 aa15.76■□□□□ 0.11
VEGFA-225ENST00000523950 SLC51AQ86UW1 340 aa15.76■□□□□ 0.11
VEGFA-225ENST00000523950 BICC1Q9H694 974 aaKnown RBP15.76■□□□□ 0.11
VEGFA-225ENST00000523950 RCAN3Q9UKA8 241 aa15.76■□□□□ 0.11
VEGFA-225ENST00000523950 WDR90Q96KV7 1748 aa15.76■□□□□ 0.11
VEGFA-225ENST00000523950 A0A1B0GUL6 1792 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms