RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 L3MBTL3Q96JM7 780 aaPredicted RBP13.24□□□□□ -0.29
CTNNA1-235ENST00000522730 WDR90Q96KV7 1748 aa13.24□□□□□ -0.29
CTNNA1-235ENST00000522730 ARFGEF2Q9Y6D5 1785 aa13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 LMOD1P29536 600 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 MAP1SQ66K74 1059 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 SP8Q8IXZ3 490 aa13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 MYD88Q99836 296 aa13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 MRS2Q9HD23 443 aa13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 MKRN1Q9UHC7 482 aaKnown RBP13.23□□□□□ -0.29
CTNNA1-235ENST00000522730 IRS4O14654 1257 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-235ENST00000522730 ANP32CO43423 234 aa13.22□□□□□ -0.29
CTNNA1-235ENST00000522730 GRAPQ13588 217 aa13.22□□□□□ -0.29
CTNNA1-235ENST00000522730 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
CTNNA1-235ENST00000522730 SUPT20HQ8NEM7 779 aa13.22□□□□□ -0.29
CTNNA1-235ENST00000522730 GRAPLQ8TC17 118 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-235ENST00000522730 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
CTNNA1-235ENST00000522730 EPS15P42566 896 aa13.21□□□□□ -0.29
CTNNA1-235ENST00000522730 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
CTNNA1-235ENST00000522730 PNMA8AQ86V59 439 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-235ENST00000522730 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
CTNNA1-235ENST00000522730 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
CTNNA1-235ENST00000522730 C6orf229H3BNL8 230 aa13.2□□□□□ -0.3
CTNNA1-235ENST00000522730 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
CTNNA1-235ENST00000522730 RAD17O75943 681 aa13.2□□□□□ -0.3
CTNNA1-235ENST00000522730 JMYQ8N9B5 988 aa13.2□□□□□ -0.3
CTNNA1-235ENST00000522730 CELF1Q92879 486 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-235ENST00000522730 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-235ENST00000522730 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
CTNNA1-235ENST00000522730 NSFL1CQ9UNZ2 370 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-235ENST00000522730 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-235ENST00000522730 ITGBL1O95965 494 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-235ENST00000522730 CXCL9Q07325 125 aa13.19□□□□□ -0.3
CTNNA1-235ENST00000522730 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
CTNNA1-235ENST00000522730 COL4A5P29400 1685 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 TMEM88BA6NKF7 163 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 TRIM28Q13263 835 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 SF3B3Q15393 1217 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 BCL2L13Q9BXK5 485 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 CHMP4AQ9BY43 222 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 VPS33BQ9H267 617 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 SNED1Q8TER0 1413 aa13.18□□□□□ -0.3
CTNNA1-235ENST00000522730 GMPSP49915 693 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 SCNN1DP51172 638 aa13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 RPS8P62241 208 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 GPSM2P81274 684 aa13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 C1QBPQ07021 282 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 WASHC4Q2M389 1173 aa13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 CWC25Q9NXE8 425 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-235ENST00000522730 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 HSPA1AP0DMV8 641 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 HSPA1BP0DMV9 641 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 FMR1Q06787 632 aaKnown RBP eCLIP13.16□□□□□ -0.31e-8■■■□□ 16.3
CTNNA1-235ENST00000522730 KIAA2012Q0VF49 1180 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 TNIP1Q15025 636 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-235ENST00000522730 TAF1P21675 1872 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 G3V3G9 751 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 KSR2Q6VAB6 950 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 USP50Q70EL3 339 aaPredicted RBP13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 G2E3Q7L622 706 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 DBNDD1Q9H9R9 158 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 GPRC5DQ9NZD1 345 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 SCN4AP35499 1836 aa13.15□□□□□ -0.3
CTNNA1-235ENST00000522730 TRAF5O00463 557 aa13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 PDE8AO60658 829 aa13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 VEGFBP49765 207 aa13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 NEXNQ0ZGT2 675 aa13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 GRM1Q13255 1194 aa13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 CCDC27Q2M243 656 aa13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 CCDC152Q4G0S7 254 aa13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 PAXIP1Q6ZW49 1069 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 ADARB2Q9NS39 739 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 CNOT7Q9UIV1 285 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
CTNNA1-235ENST00000522730 SHTN1A0MZ66 631 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms