RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 UBE3BQ7Z3V4 1068 aa22.79■■□□□ 1.24
CLK4-211ENST00000522556 GPBP1L1Q9HC44 474 aaPredicted RBP22.79■■□□□ 1.24
CLK4-211ENST00000522556 SEC31BQ9NQW1 1179 aa22.79■■□□□ 1.24
CLK4-211ENST00000522556 CASP7P55210 303 aa22.78■■□□□ 1.24
CLK4-211ENST00000522556 GRAPQ13588 217 aa22.78■■□□□ 1.24
CLK4-211ENST00000522556 BEND3Q5T5X7 828 aa22.78■■□□□ 1.24
CLK4-211ENST00000522556 DDX46Q7L014 1031 aaKnown RBP22.78■■□□□ 1.24
CLK4-211ENST00000522556 GRAPLQ8TC17 118 aaPredicted RBP22.78■■□□□ 1.24
CLK4-211ENST00000522556 NMRK2Q9NPI5 230 aa22.78■■□□□ 1.24
CLK4-211ENST00000522556 CDHR2Q9BYE9 1310 aa22.78■■□□□ 1.24
CLK4-211ENST00000522556 LINS1Q8NG48 757 aa22.77■■□□□ 1.24
CLK4-211ENST00000522556 ATP6V0A2Q9Y487 856 aa22.77■■□□□ 1.24
CLK4-211ENST00000522556 LTBP1Q14766 1721 aa22.77■■□□□ 1.23
CLK4-211ENST00000522556 H7C1W4 665 aa22.76■■□□□ 1.23
CLK4-211ENST00000522556 PDE8AO60658 829 aa22.76■■□□□ 1.23
CLK4-211ENST00000522556 RTKN2Q8IZC4 609 aa22.75■■□□□ 1.23
CLK4-211ENST00000522556 KIF3CO14782 793 aa22.74■■□□□ 1.23
CLK4-211ENST00000522556 CTSWP56202 376 aa22.74■■□□□ 1.23
CLK4-211ENST00000522556 SLC4A10Q6U841 1118 aa22.74■■□□□ 1.23
CLK4-211ENST00000522556 PSMD1Q99460 953 aa22.73■■□□□ 1.23
CLK4-211ENST00000522556 SMC4Q9NTJ3 1288 aa22.73■■□□□ 1.23
CLK4-211ENST00000522556 BBOX1O75936 387 aa22.72■■□□□ 1.23
CLK4-211ENST00000522556 IARSP41252 1262 aaKnown RBP22.72■■□□□ 1.23
CLK4-211ENST00000522556 CC2D2BQ6DHV5 1058 aa22.72■■□□□ 1.23
CLK4-211ENST00000522556 TTLL11Q8NHH1 800 aa22.72■■□□□ 1.23
CLK4-211ENST00000522556 ZNF541Q9H0D2 1346 aa22.72■■□□□ 1.23
CLK4-211ENST00000522556 ALDH1L2Q3SY69 923 aa22.71■■□□□ 1.23
CLK4-211ENST00000522556 SP8Q8IXZ3 490 aa22.71■■□□□ 1.23
CLK4-211ENST00000522556 GREM2Q9H772 168 aa22.71■■□□□ 1.23
CLK4-211ENST00000522556 ZC3H4Q9UPT8 1303 aaKnown RBP22.71■■□□□ 1.23
CLK4-211ENST00000522556 CCDC152Q4G0S7 254 aa22.7■■□□□ 1.22
CLK4-211ENST00000522556 WDR90Q96KV7 1748 aa22.7■■□□□ 1.22
CLK4-211ENST00000522556 GLTPD2A6NH11 291 aa22.69■■□□□ 1.22
CLK4-211ENST00000522556 EPHA10Q5JZY3 1008 aa22.69■■□□□ 1.22
CLK4-211ENST00000522556 PTPRCP08575 1304 aa22.68■■□□□ 1.22
CLK4-211ENST00000522556 ZBED9Q6R2W3 1325 aa22.68■■□□□ 1.22
CLK4-211ENST00000522556 RARSP54136 660 aaKnown RBP22.68■■□□□ 1.22
CLK4-211ENST00000522556 RPS8P62241 208 aaKnown RBP22.68■■□□□ 1.22
CLK4-211ENST00000522556 AOC3Q16853 763 aa22.68■■□□□ 1.22
CLK4-211ENST00000522556 FAM161AQ3B820 660 aa22.68■■□□□ 1.22
CLK4-211ENST00000522556 GPR101Q96P66 508 aaPredicted RBP22.68■■□□□ 1.22
CLK4-211ENST00000522556 PLA2G12BQ9BX93 195 aa22.68■■□□□ 1.22
CLK4-211ENST00000522556 RRAGCQ9HB90 399 aa22.68■■□□□ 1.22
CLK4-211ENST00000522556 KDM2BQ8NHM5 1336 aa22.67■■□□□ 1.22
CLK4-211ENST00000522556 GRM8O00222 908 aa22.67■■□□□ 1.22
CLK4-211ENST00000522556 DDNO94850 711 aaPredicted RBP22.67■■□□□ 1.22
CLK4-211ENST00000522556 GPSM2P81274 684 aa22.67■■□□□ 1.22
CLK4-211ENST00000522556 DPP8Q6V1X1 898 aaPredicted RBP22.67■■□□□ 1.22
CLK4-211ENST00000522556 MPNDQ8N594 471 aa22.67■■□□□ 1.22
CLK4-211ENST00000522556 RTFDC1Q9BY42 306 aaPredicted RBP22.67■■□□□ 1.22
CLK4-211ENST00000522556 SRCIN1Q9C0H9 1055 aa22.67■■□□□ 1.22
CLK4-211ENST00000522556 POTECB2RU33 542 aa22.66■■□□□ 1.22
CLK4-211ENST00000522556 ALDH1L1O75891 902 aa22.66■■□□□ 1.22
CLK4-211ENST00000522556 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
CLK4-211ENST00000522556 HSP90B1P14625 803 aaKnown RBP22.66■■□□□ 1.22
CLK4-211ENST00000522556 FOXO4P98177 505 aa22.66■■□□□ 1.22
CLK4-211ENST00000522556 NOB1Q9ULX3 412 aaKnown RBP22.66■■□□□ 1.22
CLK4-211ENST00000522556 A0A1B0GUL6 1792 aa22.66■■□□□ 1.22
CLK4-211ENST00000522556 RTL9Q8NET4 1388 aa22.65■■□□□ 1.22
CLK4-211ENST00000522556 PPIP5K2O43314 1243 aa22.65■■□□□ 1.22
CLK4-211ENST00000522556 C1QTNF8P60827 252 aa22.65■■□□□ 1.22
CLK4-211ENST00000522556 LARGE2Q8N3Y3 721 aa22.65■■□□□ 1.22
CLK4-211ENST00000522556 TNNQ9UQP3 1299 aa22.65■■□□□ 1.22
CLK4-211ENST00000522556 FZD9O00144 591 aa22.64■■□□□ 1.21
CLK4-211ENST00000522556 NBPF7P0C2Y1 421 aaPredicted RBP22.64■■□□□ 1.21
CLK4-211ENST00000522556 SUCLG2Q96I99 432 aa22.64■■□□□ 1.21
CLK4-211ENST00000522556 POLLQ9UGP5 575 aa22.64■■□□□ 1.21
CLK4-211ENST00000522556 NSFL1CQ9UNZ2 370 aaKnown RBP22.64■■□□□ 1.21
CLK4-211ENST00000522556 WTIPA6NIX2 430 aaPredicted RBP22.63■■□□□ 1.21
CLK4-211ENST00000522556 BCAR3O75815 825 aa22.63■■□□□ 1.21
CLK4-211ENST00000522556 CSF1RP07333 972 aa22.63■■□□□ 1.21
CLK4-211ENST00000522556 TMC4Q7Z404 712 aa22.63■■□□□ 1.21
CLK4-211ENST00000522556 ANKRD18AQ8IVF6 992 aa22.63■■□□□ 1.21
CLK4-211ENST00000522556 KAZALD1Q96I82 304 aa22.63■■□□□ 1.21
CLK4-211ENST00000522556 ITGA6P23229 1130 aa22.62■■□□□ 1.21
CLK4-211ENST00000522556 GRIPAP1Q4V328 841 aa22.62■■□□□ 1.21
CLK4-211ENST00000522556 TMX4Q9H1E5 349 aaPredicted RBP22.62■■□□□ 1.21
CLK4-211ENST00000522556 C9orf78Q9NZ63 289 aaPredicted RBP22.62■■□□□ 1.21
CLK4-211ENST00000522556 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
CLK4-211ENST00000522556 UTYO14607 1347 aa22.6■■□□□ 1.21
CLK4-211ENST00000522556 KIAA2012Q0VF49 1180 aa22.6■■□□□ 1.21
CLK4-211ENST00000522556 DPY19L2Q6NUT2 758 aa22.6■■□□□ 1.21
CLK4-211ENST00000522556 NIM1KQ8IY84 436 aa22.6■■□□□ 1.21
CLK4-211ENST00000522556 TBC1D16Q8TBP0 767 aa22.6■■□□□ 1.21
CLK4-211ENST00000522556 JDP2Q8WYK2 163 aa22.6■■□□□ 1.21
CLK4-211ENST00000522556 CDC5LQ99459 802 aaKnown RBP22.6■■□□□ 1.21
CLK4-211ENST00000522556 SCN9AQ15858 1988 aa22.59■■□□□ 1.21
CLK4-211ENST00000522556 RIMBP2O15034 1052 aa22.59■■□□□ 1.21
CLK4-211ENST00000522556 LMBR1LQ6UX01 489 aa22.59■■□□□ 1.21
CLK4-211ENST00000522556 SUPT20HQ8NEM7 779 aa22.59■■□□□ 1.21
CLK4-211ENST00000522556 CHMP3Q9Y3E7 222 aa22.59■■□□□ 1.21
CLK4-211ENST00000522556 YDJCA8MPS7 323 aa22.58■■□□□ 1.21
CLK4-211ENST00000522556 C6orf229H3BNL8 230 aa22.58■■□□□ 1.21
CLK4-211ENST00000522556 UFL1O94874 794 aa22.58■■□□□ 1.21
CLK4-211ENST00000522556 USP44Q9H0E7 712 aa22.58■■□□□ 1.21
CLK4-211ENST00000522556 SCN4AP35499 1836 aa22.57■■□□□ 1.2
CLK4-211ENST00000522556 ZNF594Q96JF6 807 aaPredicted RBP22.57■■□□□ 1.2
CLK4-211ENST00000522556 PODXL2Q9NZ53 605 aa22.57■■□□□ 1.2
CLK4-211ENST00000522556 ANKIB1Q9P2G1 1089 aa22.57■■□□□ 1.2
CLK4-211ENST00000522556 MINPP1Q9UNW1 487 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms