RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
SHPRH-209ENST00000521977 PCCAP05165 728 aaPredicted RBP11.85□□□□□ -0.51
SHPRH-209ENST00000521977 HMGB2P26583 209 aaKnown RBP11.85□□□□□ -0.51
SHPRH-209ENST00000521977 PDE4AP27815 886 aa11.85□□□□□ -0.51
SHPRH-209ENST00000521977 PSEN1P49768 467 aa11.85□□□□□ -0.51
SHPRH-209ENST00000521977 EPHA10Q5JZY3 1008 aa11.85□□□□□ -0.51
SHPRH-209ENST00000521977 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
SHPRH-209ENST00000521977 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
SHPRH-209ENST00000521977 CHD1LQ86WJ1 897 aa11.85□□□□□ -0.51
SHPRH-209ENST00000521977 ZBTB38Q8NAP3 1195 aaPredicted RBP11.85□□□□□ -0.51
SHPRH-209ENST00000521977 UBN2Q6ZU65 1347 aa11.85□□□□□ -0.51
SHPRH-209ENST00000521977 SRGAP3O43295 1099 aa11.84□□□□□ -0.51
SHPRH-209ENST00000521977 FOXO4P98177 505 aa11.84□□□□□ -0.51
SHPRH-209ENST00000521977 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
SHPRH-209ENST00000521977 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
SHPRH-209ENST00000521977 ANKRD45Q5TZF3 282 aa11.84□□□□□ -0.51
SHPRH-209ENST00000521977 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
SHPRH-209ENST00000521977 NOP58Q9Y2X3 529 aaKnown RBP11.84□□□□□ -0.51
SHPRH-209ENST00000521977 RTCBQ9Y3I0 505 aaKnown RBP11.84□□□□□ -0.51
SHPRH-209ENST00000521977 UBR3Q6ZT12 1888 aa11.84□□□□□ -0.51
SHPRH-209ENST00000521977 CDHR2Q9BYE9 1310 aa11.84□□□□□ -0.51
SHPRH-209ENST00000521977 GNPATO15228 680 aa11.83□□□□□ -0.52
SHPRH-209ENST00000521977 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
SHPRH-209ENST00000521977 AMIGO3Q86WK7 504 aa11.83□□□□□ -0.52
SHPRH-209ENST00000521977 ARXQ96QS3 562 aa11.83□□□□□ -0.52
SHPRH-209ENST00000521977 NARFQ9UHQ1 456 aa11.83□□□□□ -0.52
SHPRH-209ENST00000521977 ZNF652Q9Y2D9 606 aa11.83□□□□□ -0.52
SHPRH-209ENST00000521977 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
SHPRH-209ENST00000521977 RAB11FIP3O75154 756 aa11.82□□□□□ -0.52
SHPRH-209ENST00000521977 APBA3O96018 575 aa11.82□□□□□ -0.52
SHPRH-209ENST00000521977 GPTP24298 496 aa11.82□□□□□ -0.52
SHPRH-209ENST00000521977 RFX5P48382 616 aaPredicted RBP11.82□□□□□ -0.52
SHPRH-209ENST00000521977 RGS3P49796 1198 aa11.82□□□□□ -0.52
SHPRH-209ENST00000521977 JARID2Q92833 1246 aaPredicted RBP11.82□□□□□ -0.52
SHPRH-209ENST00000521977 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
SHPRH-209ENST00000521977 AK7Q96M32 723 aa11.82□□□□□ -0.52
SHPRH-209ENST00000521977 LNPKQ9C0E8 428 aa11.82□□□□□ -0.52
SHPRH-209ENST00000521977 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
SHPRH-209ENST00000521977 EXOC6BQ9Y2D4 811 aa11.82□□□□□ -0.52
SHPRH-209ENST00000521977 POTEMA6NI47 508 aa11.81□□□□□ -0.52
SHPRH-209ENST00000521977 HSP90AB4PQ58FF6 505 aa11.81□□□□□ -0.52
SHPRH-209ENST00000521977 SUSD4Q5VX71 490 aa11.81□□□□□ -0.52
SHPRH-209ENST00000521977 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
SHPRH-209ENST00000521977 FAM89AQ96GI7 184 aa11.81□□□□□ -0.52
SHPRH-209ENST00000521977 USP42Q9H9J4 1324 aaKnown RBP11.81□□□□□ -0.52
SHPRH-209ENST00000521977 SURF6O75683 361 aaKnown RBP11.8□□□□□ -0.52
SHPRH-209ENST00000521977 NTSR2O95665 410 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 CSF1RP07333 972 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 SSFA2P28290 1259 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
SHPRH-209ENST00000521977 TRAPPC3LQ5T215 181 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 USPL1Q5W0Q7 1092 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 LMBR1LQ6UX01 489 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 LRRCC1Q9C099 1032 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 COPRSQ9NQ92 184 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
SHPRH-209ENST00000521977 PTPN12Q05209 780 aaKnown RBP11.79□□□□□ -0.52
SHPRH-209ENST00000521977 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
SHPRH-209ENST00000521977 ILDR1Q86SU0 546 aaPredicted RBP11.79□□□□□ -0.52
SHPRH-209ENST00000521977 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
SHPRH-209ENST00000521977 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
SHPRH-209ENST00000521977 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
SHPRH-209ENST00000521977 PA2G4Q9UQ80 394 aaKnown RBP11.79□□□□□ -0.52
SHPRH-209ENST00000521977 NIP7Q9Y221 180 aaKnown RBP eCLIP11.79□□□□□ -0.52
SHPRH-209ENST00000521977 SALL3Q9BXA9 1300 aa11.79□□□□□ -0.52
SHPRH-209ENST00000521977 LAMB2P55268 1798 aa11.79□□□□□ -0.52
SHPRH-209ENST00000521977 MYH3P11055 1940 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 IRS4O14654 1257 aaPredicted RBP11.78□□□□□ -0.52
SHPRH-209ENST00000521977 SMARCA5O60264 1052 aaPredicted RBP11.78□□□□□ -0.52
SHPRH-209ENST00000521977 PDE8AO60658 829 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 ZPR1O75312 459 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 TBC1D9BQ66K14 1250 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 POTEGQ6S5H5 508 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 PLEKHM2Q8IWE5 1019 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 RHPN1Q8TCX5 695 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 KIF1BPQ96EK5 621 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 SH3TC1Q8TE82 1336 aa11.78□□□□□ -0.52
SHPRH-209ENST00000521977 DDX60Q8IY21 1712 aaKnown RBP11.77□□□□□ -0.52
SHPRH-209ENST00000521977 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
SHPRH-209ENST00000521977 RFC4P35249 363 aa11.77□□□□□ -0.53
SHPRH-209ENST00000521977 CTSWP56202 376 aa11.77□□□□□ -0.53
SHPRH-209ENST00000521977 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.53
SHPRH-209ENST00000521977 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
SHPRH-209ENST00000521977 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
SHPRH-209ENST00000521977 CAMKK2Q96RR4 588 aa11.77□□□□□ -0.53
SHPRH-209ENST00000521977 OSBPL3Q9H4L5 887 aa11.77□□□□□ -0.53
SHPRH-209ENST00000521977 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
SHPRH-209ENST00000521977 TUBGCP6Q96RT7 1819 aa11.76□□□□□ -0.53
SHPRH-209ENST00000521977 APBB1O00213 710 aa11.76□□□□□ -0.53
SHPRH-209ENST00000521977 PHF14O94880 888 aa11.76□□□□□ -0.53
SHPRH-209ENST00000521977 SASH1O94885 1247 aa11.76□□□□□ -0.53
SHPRH-209ENST00000521977 ZNF827Q17R98 1081 aa11.76□□□□□ -0.53
SHPRH-209ENST00000521977 LCE2DQ5TA82 110 aaPredicted RBP11.76□□□□□ -0.53
SHPRH-209ENST00000521977 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
SHPRH-209ENST00000521977 KLHDC4Q8TBB5 520 aa11.76□□□□□ -0.53
SHPRH-209ENST00000521977 TSHZ2Q9NRE2 1034 aa11.76□□□□□ -0.53
SHPRH-209ENST00000521977 GYS1P13807 737 aa11.75□□□□□ -0.53
SHPRH-209ENST00000521977 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
SHPRH-209ENST00000521977 G3BP1Q13283 466 aaKnown RBP eCLIP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms