RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 CT47B1P0C2W7 299 aaPredicted RBP13.98□□□□□ -0.17
MRPS28-208ENST00000521605 HIRAP54198 1017 aaPredicted RBP13.98□□□□□ -0.17
MRPS28-208ENST00000521605 KIF23Q02241 960 aaPredicted RBP13.98□□□□□ -0.17
MRPS28-208ENST00000521605 CCDC146Q8IYE0 955 aa13.98□□□□□ -0.17
MRPS28-208ENST00000521605 TRPM4Q8TD43 1214 aa13.98□□□□□ -0.17
MRPS28-208ENST00000521605 CDCA7LQ96GN5 454 aa13.98□□□□□ -0.17
MRPS28-208ENST00000521605 RNF186Q9NXI6 227 aa13.98□□□□□ -0.17
MRPS28-208ENST00000521605 SAGE1Q9NXZ1 904 aa13.98□□□□□ -0.17
MRPS28-208ENST00000521605 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
MRPS28-208ENST00000521605 SHTN1A0MZ66 631 aa13.97□□□□□ -0.17
MRPS28-208ENST00000521605 FAM155AB1AL88 458 aaPredicted RBP13.97□□□□□ -0.17
MRPS28-208ENST00000521605 NBPF26B4DH59 902 aa13.97□□□□□ -0.17
MRPS28-208ENST00000521605 U2SURPO15042 1029 aaKnown RBP13.97□□□□□ -0.17
MRPS28-208ENST00000521605 RRP1P56182 461 aaKnown RBP13.97□□□□□ -0.17
MRPS28-208ENST00000521605 RGMBQ6NW40 437 aa13.97□□□□□ -0.17
MRPS28-208ENST00000521605 NBPF10Q6P3W6 841 aaKnown RBP13.97□□□□□ -0.17
MRPS28-208ENST00000521605 CTU1Q7Z7A3 348 aaKnown RBP13.97□□□□□ -0.17
MRPS28-208ENST00000521605 NBPF15Q8N660 670 aa13.97□□□□□ -0.17
MRPS28-208ENST00000521605 GAS2L2Q8NHY3 880 aa13.97□□□□□ -0.17
MRPS28-208ENST00000521605 PGAP2Q9UHJ9 254 aa13.97□□□□□ -0.17
MRPS28-208ENST00000521605 ZNRF3Q9ULT6 936 aa13.97□□□□□ -0.17
MRPS28-208ENST00000521605 MAPK8IP3Q9UPT6 1336 aa13.96□□□□□ -0.17
MRPS28-208ENST00000521605 RAD17O75943 681 aa13.96□□□□□ -0.17
MRPS28-208ENST00000521605 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
MRPS28-208ENST00000521605 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.17
MRPS28-208ENST00000521605 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
MRPS28-208ENST00000521605 RBM17Q96I25 401 aaKnown RBP13.96□□□□□ -0.17
MRPS28-208ENST00000521605 NYXQ9GZU5 481 aa13.96□□□□□ -0.17
MRPS28-208ENST00000521605 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
MRPS28-208ENST00000521605 HPS5Q9UPZ3 1129 aa13.96□□□□□ -0.17
MRPS28-208ENST00000521605 GPTP24298 496 aa13.95□□□□□ -0.18
MRPS28-208ENST00000521605 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
MRPS28-208ENST00000521605 ZC3H15Q8WU90 426 aaKnown RBP13.95□□□□□ -0.18
MRPS28-208ENST00000521605 TMX4Q9H1E5 349 aaPredicted RBP13.95□□□□□ -0.18
MRPS28-208ENST00000521605 NEFMP07197 916 aa13.94□□□□□ -0.18
MRPS28-208ENST00000521605 TMPOP42166 694 aaKnown RBP13.94□□□□□ -0.18
MRPS28-208ENST00000521605 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
MRPS28-208ENST00000521605 MYH16Q9H6N6 1097 aa13.94□□□□□ -0.18
MRPS28-208ENST00000521605 CNOT7Q9UIV1 285 aaKnown RBP13.94□□□□□ -0.18
MRPS28-208ENST00000521605 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
MRPS28-208ENST00000521605 CEMIPQ8WUJ3 1361 aa13.94□□□□□ -0.18
MRPS28-208ENST00000521605 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
MRPS28-208ENST00000521605 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
MRPS28-208ENST00000521605 C3orf67Q6ZVT6 689 aa13.93□□□□□ -0.18
MRPS28-208ENST00000521605 C2orf69Q8N8R5 385 aa13.93□□□□□ -0.18
MRPS28-208ENST00000521605 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-208ENST00000521605 CCDC102AQ96A19 550 aa13.93□□□□□ -0.18
MRPS28-208ENST00000521605 CRAMP1Q96RY5 1269 aa13.93□□□□□ -0.18
MRPS28-208ENST00000521605 GBA2Q9HCG7 927 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-208ENST00000521605 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
MRPS28-208ENST00000521605 ADM5C9JUS6 153 aa13.92□□□□□ -0.18
MRPS28-208ENST00000521605 H7C1D1 291 aa13.92□□□□□ -0.18
MRPS28-208ENST00000521605 RGL2O15211 777 aa13.92□□□□□ -0.18
MRPS28-208ENST00000521605 HABP4Q5JVS0 413 aaKnown RBP13.92□□□□□ -0.18
MRPS28-208ENST00000521605 SAMD7Q7Z3H4 446 aa13.92□□□□□ -0.18
MRPS28-208ENST00000521605 KRT26Q7Z3Y9 468 aa13.92□□□□□ -0.18
MRPS28-208ENST00000521605 MICALL2Q8IY33 904 aa13.92□□□□□ -0.18
MRPS28-208ENST00000521605 CSRNP1Q96S65 589 aa13.92□□□□□ -0.18
MRPS28-208ENST00000521605 CDHR2Q9BYE9 1310 aa13.91□□□□□ -0.18
MRPS28-208ENST00000521605 LMOD3Q0VAK6 560 aa13.91□□□□□ -0.18
MRPS28-208ENST00000521605 TNIP1Q15025 636 aa13.91□□□□□ -0.18
MRPS28-208ENST00000521605 TBC1D10BQ4KMP7 808 aaPredicted RBP13.91□□□□□ -0.18
MRPS28-208ENST00000521605 DPP8Q6V1X1 898 aaPredicted RBP13.91□□□□□ -0.18
MRPS28-208ENST00000521605 SUPT20HQ8NEM7 779 aa13.91□□□□□ -0.18
MRPS28-208ENST00000521605 HDAC9Q9UKV0 1011 aa13.91□□□□□ -0.18
MRPS28-208ENST00000521605 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
MRPS28-208ENST00000521605 ATP6V0A2Q9Y487 856 aa13.91□□□□□ -0.18
MRPS28-208ENST00000521605 UBN2Q6ZU65 1347 aa13.9□□□□□ -0.18
MRPS28-208ENST00000521605 NFE2L2Q16236 605 aa13.9□□□□□ -0.18
MRPS28-208ENST00000521605 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
MRPS28-208ENST00000521605 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
MRPS28-208ENST00000521605 POTEHQ6S545 545 aa13.9□□□□□ -0.18
MRPS28-208ENST00000521605 MCM10Q7L590 875 aa13.9□□□□□ -0.18
MRPS28-208ENST00000521605 VPS33BQ9H267 617 aa13.9□□□□□ -0.18
MRPS28-208ENST00000521605 ZBTB3Q9H5J0 574 aa13.9□□□□□ -0.18
MRPS28-208ENST00000521605 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
MRPS28-208ENST00000521605 EGFRP00533 1210 aa13.89□□□□□ -0.19
MRPS28-208ENST00000521605 SLC10A3P09131 477 aa13.89□□□□□ -0.19
MRPS28-208ENST00000521605 KIF6Q6ZMV9 814 aa13.89□□□□□ -0.19
MRPS28-208ENST00000521605 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
MRPS28-208ENST00000521605 PHACTR3Q96KR7 559 aa13.89□□□□□ -0.19
MRPS28-208ENST00000521605 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
MRPS28-208ENST00000521605 NUP98P52948 1817 aa13.89□□□□□ -0.19
MRPS28-208ENST00000521605 YDJCA8MPS7 323 aa13.88□□□□□ -0.19
MRPS28-208ENST00000521605 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
MRPS28-208ENST00000521605 KIAA2012Q0VF49 1180 aa13.88□□□□□ -0.19
MRPS28-208ENST00000521605 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
MRPS28-208ENST00000521605 MPNDQ8N594 471 aa13.88□□□□□ -0.19
MRPS28-208ENST00000521605 DCPSQ96C86 337 aaKnown RBP13.88□□□□□ -0.19
MRPS28-208ENST00000521605 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
MRPS28-208ENST00000521605 ABCC4O15439 1325 aa13.88□□□□□ -0.19
MRPS28-208ENST00000521605 MAP3K15Q6ZN16 1313 aa13.88□□□□□ -0.19
MRPS28-208ENST00000521605 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
MRPS28-208ENST00000521605 NTSR2O95665 410 aa13.87□□□□□ -0.19
MRPS28-208ENST00000521605 TBC1D8O95759 1140 aa13.87□□□□□ -0.19
MRPS28-208ENST00000521605 AAMPQ13685 434 aa13.87□□□□□ -0.19
MRPS28-208ENST00000521605 DCTN1Q14203 1278 aa13.87□□□□□ -0.19
MRPS28-208ENST00000521605 ZNF296Q8WUU4 475 aaPredicted RBP13.87□□□□□ -0.19
MRPS28-208ENST00000521605 RTF1Q92541 710 aaKnown RBP13.87□□□□□ -0.19
MRPS28-208ENST00000521605 NLRP3Q96P20 1036 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms