RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
PCM1-214ENST00000521338 IDH3AP50213 366 aa7.02□□□□□ -1.29
PCM1-214ENST00000521338 GPLD1P80108 840 aa7.02□□□□□ -1.29
PCM1-214ENST00000521338 MLLT1Q03111 559 aaPredicted RBP7.02□□□□□ -1.29
PCM1-214ENST00000521338 ELMSAN1Q6PJG2 1045 aa7.02□□□□□ -1.29
PCM1-214ENST00000521338 SLC51AQ86UW1 340 aa7.02□□□□□ -1.29
PCM1-214ENST00000521338 TMEM130Q8N3G9 435 aa7.02□□□□□ -1.29
PCM1-214ENST00000521338 RASA1P20936 1047 aa7.01□□□□□ -1.29
PCM1-214ENST00000521338 KRT25Q7Z3Z0 450 aa7.01□□□□□ -1.29
PCM1-214ENST00000521338 KLK14Q9P0G3 267 aa7.01□□□□□ -1.29
PCM1-214ENST00000521338 SASH3O75995 380 aa7□□□□□ -1.29
PCM1-214ENST00000521338 ALX3O95076 343 aa7□□□□□ -1.29
PCM1-214ENST00000521338 EPB42P16452 691 aa7□□□□□ -1.29
PCM1-214ENST00000521338 FSTP19883 344 aa7□□□□□ -1.29
PCM1-214ENST00000521338 CD97P48960 835 aa7□□□□□ -1.29
PCM1-214ENST00000521338 TPRNQ4KMQ1 711 aa7□□□□□ -1.29
PCM1-214ENST00000521338 SMG9Q9H0W8 520 aaKnown RBP7□□□□□ -1.29
PCM1-214ENST00000521338 AKTIPQ9H8T0 292 aa7□□□□□ -1.29
PCM1-214ENST00000521338 LGR5O75473 907 aa6.99□□□□□ -1.29
PCM1-214ENST00000521338 IGFBP4P22692 258 aa6.99□□□□□ -1.29
PCM1-214ENST00000521338 NRLP54845 237 aa6.99□□□□□ -1.29
PCM1-214ENST00000521338 Q6ZS46 218 aa6.99□□□□□ -1.29
PCM1-214ENST00000521338 PCMTD2Q9NV79 361 aa6.99□□□□□ -1.29
PCM1-214ENST00000521338 RBM19Q9Y4C8 960 aaKnown RBP6.99□□□□□ -1.29
PCM1-214ENST00000521338 F8W735 103 aaPredicted RBP6.98□□□□□ -1.29
PCM1-214ENST00000521338 OPLAHO14841 1288 aa6.98□□□□□ -1.29
PCM1-214ENST00000521338 MED26O95402 600 aa6.98□□□□□ -1.29
PCM1-214ENST00000521338 RARAP10276 462 aa6.98□□□□□ -1.29
PCM1-214ENST00000521338 SSTR4P31391 388 aa6.98□□□□□ -1.29
PCM1-214ENST00000521338 ARSDP51689 593 aa6.98□□□□□ -1.29
PCM1-214ENST00000521338 HFE2Q6ZVN8 426 aa6.98□□□□□ -1.29
PCM1-214ENST00000521338 FMNL2Q96PY5 1086 aa6.98□□□□□ -1.29
PCM1-214ENST00000521338 QTRT2Q9H974 415 aaKnown RBP6.98□□□□□ -1.29
PCM1-214ENST00000521338 MAFBQ9Y5Q3 323 aaPredicted RBP6.98□□□□□ -1.29
PCM1-214ENST00000521338 RAD21O60216 631 aa6.97□□□□□ -1.29
PCM1-214ENST00000521338 MICAL2O94851 1124 aa6.97□□□□□ -1.29
PCM1-214ENST00000521338 EGFRP00533 1210 aa6.97□□□□□ -1.29
PCM1-214ENST00000521338 PTK7Q13308 1070 aa6.97□□□□□ -1.29
PCM1-214ENST00000521338 DGKZQ13574 1117 aa6.97□□□□□ -1.29
PCM1-214ENST00000521338 HINFPQ9BQA5 517 aa6.97□□□□□ -1.29
PCM1-214ENST00000521338 MRPL18Q9H0U6 180 aaKnown RBP6.97□□□□□ -1.29
PCM1-214ENST00000521338 TLR7Q9NYK1 1049 aaKnown RBP6.97□□□□□ -1.29
PCM1-214ENST00000521338 TFIP11Q9UBB9 837 aaKnown RBP6.97□□□□□ -1.29
PCM1-214ENST00000521338 SETDB1Q15047 1291 aa6.96□□□□□ -1.3
PCM1-214ENST00000521338 CRTC2Q53ET0 693 aaPredicted RBP6.96□□□□□ -1.3
PCM1-214ENST00000521338 J3QW42 95 aa6.95□□□□□ -1.3
PCM1-214ENST00000521338 DPYDQ12882 1025 aa6.95□□□□□ -1.3
PCM1-214ENST00000521338 KANK4Q5T7N3 995 aaPredicted RBP6.95□□□□□ -1.3
PCM1-214ENST00000521338 PLD4Q96BZ4 506 aa6.95□□□□□ -1.3
PCM1-214ENST00000521338 MYO19Q96H55 970 aa6.95□□□□□ -1.3
PCM1-214ENST00000521338 USP20Q9Y2K6 914 aa6.95□□□□□ -1.3
PCM1-214ENST00000521338 LOC102724428A0A0B4J2F2 783 aa6.94□□□□□ -1.3
PCM1-214ENST00000521338 KIAA1324LA8MWY0 1029 aaPredicted RBP6.94□□□□□ -1.3
PCM1-214ENST00000521338 HOXD8P13378 290 aaPredicted RBP6.94□□□□□ -1.3
PCM1-214ENST00000521338 EIF2AK2P19525 551 aaKnown RBP6.94□□□□□ -1.3
PCM1-214ENST00000521338 WEE1P30291 646 aa6.94□□□□□ -1.3
PCM1-214ENST00000521338 SIK1P57059 783 aa6.94□□□□□ -1.3
PCM1-214ENST00000521338 C11orf91Q3C1V1 193 aa6.94□□□□□ -1.3
PCM1-214ENST00000521338 LRFN2Q9ULH4 789 aa6.94□□□□□ -1.3
PCM1-214ENST00000521338 RTCBQ9Y3I0 505 aaKnown RBP6.94□□□□□ -1.3
PCM1-214ENST00000521338 PAX4O43316 350 aa6.93□□□□□ -1.3
PCM1-214ENST00000521338 UBTFP17480 764 aaKnown RBP6.93□□□□□ -1.3
PCM1-214ENST00000521338 IL22RA1Q8N6P7 574 aa6.93□□□□□ -1.3
PCM1-214ENST00000521338 UBL7Q96S82 380 aaPredicted RBP6.93□□□□□ -1.3
PCM1-214ENST00000521338 SRA1Q9HD15 236 aaKnown RBP6.93□□□□□ -1.3
PCM1-214ENST00000521338 KCNMB2Q9Y691 235 aa6.93□□□□□ -1.3
PCM1-214ENST00000521338 OAS3Q9Y6K5 1087 aaKnown RBP6.93□□□□□ -1.3
PCM1-214ENST00000521338 TM4SF5O14894 197 aa6.92□□□□□ -1.3
PCM1-214ENST00000521338 SLC24A1O60721 1099 aa6.92□□□□□ -1.3
PCM1-214ENST00000521338 MMP20O60882 483 aa6.92□□□□□ -1.3
PCM1-214ENST00000521338 GDF6Q6KF10 455 aaPredicted RBP6.92□□□□□ -1.3
PCM1-214ENST00000521338 LARP1Q6PKG0 1096 aaKnown RBP6.92□□□□□ -1.3
PCM1-214ENST00000521338 ANKMY2Q8IV38 441 aa6.92□□□□□ -1.3
PCM1-214ENST00000521338 AGGF1Q8N302 714 aaeCLIP6.92□□□□□ -1.3
PCM1-214ENST00000521338 FNBP4Q8N3X1 1017 aaPredicted RBP6.92□□□□□ -1.3
PCM1-214ENST00000521338 ARXQ96QS3 562 aa6.92□□□□□ -1.3
PCM1-214ENST00000521338 RAXQ9Y2V3 346 aa6.92□□□□□ -1.3
PCM1-214ENST00000521338 FOXO3O43524 673 aa6.91□□□□□ -1.3
PCM1-214ENST00000521338 ADAMTS4O75173 837 aa6.91□□□□□ -1.3
PCM1-214ENST00000521338 XYLBO75191 536 aa6.91□□□□□ -1.3
PCM1-214ENST00000521338 TGFB1P01137 390 aa6.91□□□□□ -1.3
PCM1-214ENST00000521338 IGLV1-40P01703 118 aa6.91□□□□□ -1.3
PCM1-214ENST00000521338 ARID4AP29374 1257 aaPredicted RBP6.91□□□□□ -1.3
PCM1-214ENST00000521338 SOX18P35713 384 aa6.91□□□□□ -1.3
PCM1-214ENST00000521338 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.91□□□□□ -1.3
PCM1-214ENST00000521338 GLMNQ92990 594 aa6.91□□□□□ -1.3
PCM1-214ENST00000521338 FAM196BA6NMK8 535 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L15C9J2P7 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L10C9JJH3 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L12C9JPN9 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L21D6R901 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
PCM1-214ENST00000521338 TAL1P17542 331 aaPredicted RBP6.9□□□□□ -1.3
PCM1-214ENST00000521338 TXKP42681 527 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms