RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 MPNDQ8N594 471 aa26.42■■□□□ 1.82
PABPC1-217ENST00000521067 FAM89AQ96GI7 184 aa26.42■■□□□ 1.82
PABPC1-217ENST00000521067 ZNRF3Q9ULT6 936 aa26.42■■□□□ 1.82
PABPC1-217ENST00000521067 FOXN1O15353 648 aa26.41■■□□□ 1.82
PABPC1-217ENST00000521067 APAF1O14727 1248 aa26.4■■□□□ 1.82
PABPC1-217ENST00000521067 SUPT20HQ8NEM7 779 aa26.4■■□□□ 1.82
PABPC1-217ENST00000521067 ANKRD36CQ5JPF3 1778 aa26.4■■□□□ 1.82
PABPC1-217ENST00000521067 RASSF10A6NK89 507 aa26.39■■□□□ 1.82
PABPC1-217ENST00000521067 CAPN15O75808 1086 aa26.39■■□□□ 1.82
PABPC1-217ENST00000521067 KIAA2012Q0VF49 1180 aa26.39■■□□□ 1.82
PABPC1-217ENST00000521067 USP50Q70EL3 339 aaPredicted RBP26.39■■□□□ 1.82
PABPC1-217ENST00000521067 HYPKQ9NX55 129 aa26.39■■□□□ 1.82
PABPC1-217ENST00000521067 GPRC5DQ9NZD1 345 aa26.39■■□□□ 1.82
PABPC1-217ENST00000521067 LAMB2P55268 1798 aa26.38■■□□□ 1.81
PABPC1-217ENST00000521067 DEFB115Q30KQ5 88 aa26.38■■□□□ 1.81
PABPC1-217ENST00000521067 TRAF5O00463 557 aa26.37■■□□□ 1.81
PABPC1-217ENST00000521067 SF3B3Q15393 1217 aaKnown RBP26.37■■□□□ 1.81
PABPC1-217ENST00000521067 RTL5Q5HYW3 569 aaPredicted RBP26.37■■□□□ 1.81
PABPC1-217ENST00000521067 CELF1Q92879 486 aaKnown RBP26.37■■□□□ 1.81
PABPC1-217ENST00000521067 TAF1P21675 1872 aa26.36■■□□□ 1.81
PABPC1-217ENST00000521067 ELL2O00472 640 aaPredicted RBP26.36■■□□□ 1.81
PABPC1-217ENST00000521067 RAD17O75943 681 aa26.36■■□□□ 1.81
PABPC1-217ENST00000521067 GMPSP49915 693 aaPredicted RBP26.36■■□□□ 1.81
PABPC1-217ENST00000521067 TRIM28Q13263 835 aaKnown RBP26.36■■□□□ 1.81
PABPC1-217ENST00000521067 YDJCA8MPS7 323 aa26.35■■□□□ 1.81
PABPC1-217ENST00000521067 CST9Q5W186 159 aa26.35■■□□□ 1.81
PABPC1-217ENST00000521067 PHAXQ9H814 394 aaKnown RBP26.35■■□□□ 1.81
PABPC1-217ENST00000521067 ADARB2Q9NS39 739 aaKnown RBP26.35■■□□□ 1.81
PABPC1-217ENST00000521067 WBP1LQ9NX94 342 aa26.35■■□□□ 1.81
PABPC1-217ENST00000521067 CIAPIN1Q6FI81 312 aa26.34■■□□□ 1.81
PABPC1-217ENST00000521067 IFT57Q9NWB7 429 aa26.34■■□□□ 1.81
PABPC1-217ENST00000521067 ABT1Q9ULW3 272 aaKnown RBP26.34■■□□□ 1.81
PABPC1-217ENST00000521067 HIRAP54198 1017 aaPredicted RBP26.33■■□□□ 1.81
PABPC1-217ENST00000521067 C8orf58Q8NAV2 365 aa26.33■■□□□ 1.81
PABPC1-217ENST00000521067 COL4A1P02462 1669 aa26.32■■□□□ 1.8
PABPC1-217ENST00000521067 TMC4Q7Z404 712 aa26.32■■□□□ 1.8
PABPC1-217ENST00000521067 WDR33Q9C0J8 1336 aaKnown RBP26.32■■□□□ 1.8
PABPC1-217ENST00000521067 DUOX1Q9NRD9 1551 aa26.32■■□□□ 1.8
PABPC1-217ENST00000521067 SHTN1A0MZ66 631 aa26.31■■□□□ 1.8
PABPC1-217ENST00000521067 IRS4O14654 1257 aaPredicted RBP26.31■■□□□ 1.8
PABPC1-217ENST00000521067 RIC3Q7Z5B4 369 aa26.31■■□□□ 1.8
PABPC1-217ENST00000521067 NSFL1CQ9UNZ2 370 aaKnown RBP26.31■■□□□ 1.8
PABPC1-217ENST00000521067 GNAI1P63096 354 aa26.3■■□□□ 1.8
PABPC1-217ENST00000521067 POLLQ9UGP5 575 aa26.3■■□□□ 1.8
PABPC1-217ENST00000521067 PGAP2Q9UHJ9 254 aa26.3■■□□□ 1.8
PABPC1-217ENST00000521067 DDX60Q8IY21 1712 aaKnown RBP26.3■■□□□ 1.8
PABPC1-217ENST00000521067 GPSM2P81274 684 aa26.29■■□□□ 1.8
PABPC1-217ENST00000521067 TNIP1Q15025 636 aa26.29■■□□□ 1.8
PABPC1-217ENST00000521067 CCDC184Q52MB2 194 aa26.29■■□□□ 1.8
PABPC1-217ENST00000521067 CTCFP49711 727 aaPredicted RBP26.28■■□□□ 1.8
PABPC1-217ENST00000521067 WASHC4Q2M389 1173 aa26.28■■□□□ 1.8
PABPC1-217ENST00000521067 ZBTB38Q8NAP3 1195 aaPredicted RBP26.28■■□□□ 1.8
PABPC1-217ENST00000521067 TRPM4Q8TD43 1214 aa26.28■■□□□ 1.8
PABPC1-217ENST00000521067 BCL2L13Q9BXK5 485 aa26.28■■□□□ 1.8
PABPC1-217ENST00000521067 PRDM10Q9NQV6 1147 aa26.28■■□□□ 1.8
PABPC1-217ENST00000521067 ZBTB12Q9Y330 459 aaPredicted RBP26.28■■□□□ 1.8
PABPC1-217ENST00000521067 RIMBP2O15034 1052 aa26.27■■□□□ 1.8
PABPC1-217ENST00000521067 RPS8P62241 208 aaKnown RBP26.27■■□□□ 1.8
PABPC1-217ENST00000521067 GOLGA2Q08379 1002 aa26.27■■□□□ 1.8
PABPC1-217ENST00000521067 JARID2Q92833 1246 aaPredicted RBP26.27■■□□□ 1.8
PABPC1-217ENST00000521067 AIDAQ96BJ3 306 aa26.27■■□□□ 1.8
PABPC1-217ENST00000521067 MYD88Q99836 296 aa26.27■■□□□ 1.8
PABPC1-217ENST00000521067 GLIS2Q9BZE0 524 aaPredicted RBP26.27■■□□□ 1.8
PABPC1-217ENST00000521067 SEC31BQ9NQW1 1179 aa26.27■■□□□ 1.8
PABPC1-217ENST00000521067 KCNQ5Q9NR82 932 aa26.27■■□□□ 1.8
PABPC1-217ENST00000521067 CNOT7Q9UIV1 285 aaKnown RBP26.27■■□□□ 1.8
PABPC1-217ENST00000521067 CYP4F22Q6NT55 531 aa26.26■■□□□ 1.79
PABPC1-217ENST00000521067 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
PABPC1-217ENST00000521067 GPR101Q96P66 508 aaPredicted RBP26.26■■□□□ 1.79
PABPC1-217ENST00000521067 DBNDD1Q9H9R9 158 aa26.26■■□□□ 1.79
PABPC1-217ENST00000521067 CDHR2Q9BYE9 1310 aa26.25■■□□□ 1.79
PABPC1-217ENST00000521067 C6orf229H3BNL8 230 aa26.25■■□□□ 1.79
PABPC1-217ENST00000521067 LBX1P52954 281 aa26.25■■□□□ 1.79
PABPC1-217ENST00000521067 CALD1Q05682 793 aaKnown RBP26.25■■□□□ 1.79
PABPC1-217ENST00000521067 CAPNS2Q96L46 248 aa26.25■■□□□ 1.79
PABPC1-217ENST00000521067 TLL2Q9Y6L7 1015 aa26.25■■□□□ 1.79
PABPC1-217ENST00000521067 LRRC37AA6NMS7 1700 aa26.25■■□□□ 1.79
PABPC1-217ENST00000521067 PSMD14O00487 310 aa26.24■■□□□ 1.79
PABPC1-217ENST00000521067 DOK7Q18PE1 504 aa26.23■■□□□ 1.79
PABPC1-217ENST00000521067 MICALL2Q8IY33 904 aa26.23■■□□□ 1.79
PABPC1-217ENST00000521067 TBC1D16Q8TBP0 767 aa26.23■■□□□ 1.79
PABPC1-217ENST00000521067 ZC3H15Q8WU90 426 aaKnown RBP26.23■■□□□ 1.79
PABPC1-217ENST00000521067 CELF2O95319 508 aaKnown RBP26.22■■□□□ 1.79
PABPC1-217ENST00000521067 HSPA8P11142 646 aaKnown RBP26.22■■□□□ 1.79
PABPC1-217ENST00000521067 MAP2K1Q02750 393 aaPredicted RBP26.22■■□□□ 1.79
PABPC1-217ENST00000521067 DLK2Q6UY11 383 aa26.22■■□□□ 1.79
PABPC1-217ENST00000521067 CCDC191Q8NCU4 936 aa26.22■■□□□ 1.79
PABPC1-217ENST00000521067 EGFRP00533 1210 aa26.21■■□□□ 1.79
PABPC1-217ENST00000521067 PCCAP05165 728 aaPredicted RBP26.21■■□□□ 1.79
PABPC1-217ENST00000521067 GRM1Q13255 1194 aa26.21■■□□□ 1.79
PABPC1-217ENST00000521067 PAXIP1Q6ZW49 1069 aaPredicted RBP26.21■■□□□ 1.79
PABPC1-217ENST00000521067 SAMD7Q7Z3H4 446 aa26.21■■□□□ 1.79
PABPC1-217ENST00000521067 SAPCD2Q86UD0 394 aa26.21■■□□□ 1.79
PABPC1-217ENST00000521067 DPF2Q92785 391 aa26.21■■□□□ 1.79
PABPC1-217ENST00000521067 METTL22Q9BUU2 404 aaPredicted RBP26.21■■□□□ 1.79
PABPC1-217ENST00000521067 RTL9Q8NET4 1388 aa26.2■■□□□ 1.79
PABPC1-217ENST00000521067 H7C1D1 291 aa26.2■■□□□ 1.78
PABPC1-217ENST00000521067 TSR2Q969E8 191 aaKnown RBP26.2■■□□□ 1.78
PABPC1-217ENST00000521067 CCDC85AQ96PX6 553 aaPredicted RBP26.2■■□□□ 1.78
PABPC1-217ENST00000521067 ECE2O60344 883 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms