RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 NIM1KQ8IY84 436 aa16.13■□□□□ 0.17
CSMD1-205ENST00000519623 MPNDQ8N594 471 aa16.13■□□□□ 0.17
CSMD1-205ENST00000519623 SUPT20HQ8NEM7 779 aa16.13■□□□□ 0.17
CSMD1-205ENST00000519623 DDX60Q8IY21 1712 aaKnown RBP16.13■□□□□ 0.17
CSMD1-205ENST00000519623 LTBP1Q14766 1721 aa16.12■□□□□ 0.17
CSMD1-205ENST00000519623 CXCL9Q07325 125 aa16.12■□□□□ 0.17
CSMD1-205ENST00000519623 MAP1SQ66K74 1059 aaPredicted RBP16.12■□□□□ 0.17
CSMD1-205ENST00000519623 CNTROBQ8N137 903 aa16.12■□□□□ 0.17
CSMD1-205ENST00000519623 ZNRF3Q9ULT6 936 aa16.12■□□□□ 0.17
CSMD1-205ENST00000519623 KIAA2012Q0VF49 1180 aa16.11■□□□□ 0.17
CSMD1-205ENST00000519623 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
CSMD1-205ENST00000519623 COL13A1Q5TAT6 717 aaPredicted RBP16.11■□□□□ 0.17
CSMD1-205ENST00000519623 TMC4Q7Z404 712 aa16.11■□□□□ 0.17
CSMD1-205ENST00000519623 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
CSMD1-205ENST00000519623 MKRN1Q9UHC7 482 aaKnown RBP16.11■□□□□ 0.17
CSMD1-205ENST00000519623 TMEM88BA6NKF7 163 aa16.1■□□□□ 0.17
CSMD1-205ENST00000519623 LMOD1P29536 600 aaPredicted RBP16.1■□□□□ 0.17
CSMD1-205ENST00000519623 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
CSMD1-205ENST00000519623 CELF1Q92879 486 aaKnown RBP16.1■□□□□ 0.17
CSMD1-205ENST00000519623 IRS4O14654 1257 aaPredicted RBP16.09■□□□□ 0.17
CSMD1-205ENST00000519623 HSPA1AP0DMV8 641 aaKnown RBP16.09■□□□□ 0.17
CSMD1-205ENST00000519623 HSPA1BP0DMV9 641 aaKnown RBP16.09■□□□□ 0.17
CSMD1-205ENST00000519623 GOLGA2Q08379 1002 aa16.09■□□□□ 0.17
CSMD1-205ENST00000519623 ZBTB38Q8NAP3 1195 aaPredicted RBP16.09■□□□□ 0.17
CSMD1-205ENST00000519623 CCDC27Q2M243 656 aa16.08■□□□□ 0.16
CSMD1-205ENST00000519623 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
CSMD1-205ENST00000519623 USP50Q70EL3 339 aaPredicted RBP16.08■□□□□ 0.16
CSMD1-205ENST00000519623 MYD88Q99836 296 aa16.08■□□□□ 0.16
CSMD1-205ENST00000519623 GPRC5DQ9NZD1 345 aa16.08■□□□□ 0.16
CSMD1-205ENST00000519623 CNTNAP1P78357 1384 aa16.08■□□□□ 0.16
CSMD1-205ENST00000519623 COL4A1P02462 1669 aa16.08■□□□□ 0.16
CSMD1-205ENST00000519623 RPS8P62241 208 aaKnown RBP16.07■□□□□ 0.16
CSMD1-205ENST00000519623 CIAPIN1Q6FI81 312 aa16.07■□□□□ 0.16
CSMD1-205ENST00000519623 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
CSMD1-205ENST00000519623 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
CSMD1-205ENST00000519623 METTL22Q9BUU2 404 aaPredicted RBP16.07■□□□□ 0.16
CSMD1-205ENST00000519623 CHMP4AQ9BY43 222 aa16.07■□□□□ 0.16
CSMD1-205ENST00000519623 LRRC37AA6NMS7 1700 aa16.06■□□□□ 0.16
CSMD1-205ENST00000519623 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
CSMD1-205ENST00000519623 YDJCA8MPS7 323 aa16.06■□□□□ 0.16
CSMD1-205ENST00000519623 RAD17O75943 681 aa16.06■□□□□ 0.16
CSMD1-205ENST00000519623 VEGFBP49765 207 aa16.06■□□□□ 0.16
CSMD1-205ENST00000519623 GMPSP49915 693 aaPredicted RBP16.06■□□□□ 0.16
CSMD1-205ENST00000519623 FMR1Q06787 632 aaKnown RBP eCLIP16.06■□□□□ 0.16
CSMD1-205ENST00000519623 TSR2Q969E8 191 aaKnown RBP16.06■□□□□ 0.16
CSMD1-205ENST00000519623 ADARB2Q9NS39 739 aaKnown RBP16.06■□□□□ 0.16
CSMD1-205ENST00000519623 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
CSMD1-205ENST00000519623 NSFL1CQ9UNZ2 370 aaKnown RBP16.06■□□□□ 0.16
CSMD1-205ENST00000519623 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
CSMD1-205ENST00000519623 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
CSMD1-205ENST00000519623 GPSM2P81274 684 aa16.05■□□□□ 0.16
CSMD1-205ENST00000519623 TNIP1Q15025 636 aa16.05■□□□□ 0.16
CSMD1-205ENST00000519623 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
CSMD1-205ENST00000519623 JARID2Q92833 1246 aaPredicted RBP16.05■□□□□ 0.16
CSMD1-205ENST00000519623 SEC31BQ9NQW1 1179 aa16.05■□□□□ 0.16
CSMD1-205ENST00000519623 RASSF10A6NK89 507 aa16.04■□□□□ 0.16
CSMD1-205ENST00000519623 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
CSMD1-205ENST00000519623 WASHC4Q2M389 1173 aa16.04■□□□□ 0.16
CSMD1-205ENST00000519623 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
CSMD1-205ENST00000519623 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
CSMD1-205ENST00000519623 PGAP2Q9UHJ9 254 aa16.04■□□□□ 0.16
CSMD1-205ENST00000519623 MAP3K2Q9Y2U5 619 aa16.04■□□□□ 0.16
CSMD1-205ENST00000519623 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
CSMD1-205ENST00000519623 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
CSMD1-205ENST00000519623 DEFB115Q30KQ5 88 aa16.03■□□□□ 0.16
CSMD1-205ENST00000519623 CST9Q5W186 159 aa16.03■□□□□ 0.16
CSMD1-205ENST00000519623 IL16Q14005 1332 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 PI4KAP2A4QPH2 592 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.16
CSMD1-205ENST00000519623 C6orf229H3BNL8 230 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 TRAF5O00463 557 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 RIMBP2O15034 1052 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 PDE8AO60658 829 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 IGKV5-2P06315 115 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 G2E3Q7L622 706 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 PI4KAP1Q8N8J0 262 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 DBNDD1Q9H9R9 158 aa16.02■□□□□ 0.16
CSMD1-205ENST00000519623 CNOT7Q9UIV1 285 aaKnown RBP16.02■□□□□ 0.16
CSMD1-205ENST00000519623 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
CSMD1-205ENST00000519623 TWISTNBQ3B726 338 aaPredicted RBP16.01■□□□□ 0.15
CSMD1-205ENST00000519623 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
CSMD1-205ENST00000519623 MRS2Q9HD23 443 aa16.01■□□□□ 0.15
CSMD1-205ENST00000519623 KCNQ5Q9NR82 932 aa16.01■□□□□ 0.15
CSMD1-205ENST00000519623 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
CSMD1-205ENST00000519623 PSMD14O00487 310 aa16■□□□□ 0.15
CSMD1-205ENST00000519623 SLC4A2P04920 1241 aa16■□□□□ 0.15
CSMD1-205ENST00000519623 DOK7Q18PE1 504 aa16■□□□□ 0.15
CSMD1-205ENST00000519623 ZC3H15Q8WU90 426 aaKnown RBP16■□□□□ 0.15
CSMD1-205ENST00000519623 DPF2Q92785 391 aa16■□□□□ 0.15
CSMD1-205ENST00000519623 GPR101Q96P66 508 aaPredicted RBP16■□□□□ 0.15
CSMD1-205ENST00000519623 STK31Q9BXU1 1019 aa16■□□□□ 0.15
CSMD1-205ENST00000519623 ABT1Q9ULW3 272 aaKnown RBP16■□□□□ 0.15
CSMD1-205ENST00000519623 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
CSMD1-205ENST00000519623 TRPM7Q96QT4 1865 aa15.99■□□□□ 0.15
CSMD1-205ENST00000519623 FOXN1O15353 648 aa15.99■□□□□ 0.15
CSMD1-205ENST00000519623 ANP32CO43423 234 aa15.99■□□□□ 0.15
CSMD1-205ENST00000519623 TNS4Q8IZW8 715 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms