RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 VPS72Q15906 364 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 PSD3Q9NYI0 1048 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 LRRFIP2Q9Y608 721 aaKnown RBP10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 PHLPP1O60346 1717 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 TECPR2O15040 1411 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 HMMRO75330 724 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 CPP00450 1065 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 SATB1Q01826 763 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 C1orf141Q5JVX7 400 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 TSPYL6Q8N831 410 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 CCDC191Q8NCU4 936 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 EYA1Q99502 592 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 SRCIN1Q9C0H9 1055 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 LRP6O75581 1613 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 SASH3O75995 380 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 HOXC9P31274 260 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 GIMAP6Q6P9H5 292 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 CXorf56Q9H5V9 222 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 MED4Q9NPJ6 270 aa10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 CHD2O14647 1828 aaKnown RBP10.03□□□□□ -0.8
KCNQ3-203ENST00000519589 GOLGA6L6A8MZA4 724 aa10.02□□□□□ -0.8
KCNQ3-203ENST00000519589 GOLGA5Q8TBA6 731 aa10.02□□□□□ -0.8
KCNQ3-203ENST00000519589 STK31Q9BXU1 1019 aa10.02□□□□□ -0.8
KCNQ3-203ENST00000519589 IL16Q14005 1332 aa10.02□□□□□ -0.8
KCNQ3-203ENST00000519589 RGS12O14924 1447 aa10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 MAGEA9P43362 315 aa10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 UBE2HP62256 183 aa10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 SART3Q15020 963 aaKnown RBP10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 INTS3Q68E01 1043 aaKnown RBP10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 ZNF530Q6P9A1 599 aaPredicted RBP10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 TMED8Q6PL24 325 aaPredicted RBP10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 MRVI1Q9Y6F6 885 aa10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 COL3A1P02461 1466 aaPredicted RBP10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 A0A1B0GUL7 405 aa10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 UPF1Q92900 1129 aaKnown RBP eCLIP10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 RILPL2Q969X0 211 aa10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 CNPY2Q9Y2B0 182 aa10.02□□□□□ -0.81
KCNQ3-203ENST00000519589 RPS6KA5O75582 802 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 SLU7O95391 586 aaKnown RBP10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 MCCP23508 829 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 IL13P35225 146 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 ZNF75DP51815 510 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 DNAJC21Q5F1R6 531 aaKnown RBP10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 RNF20Q5VTR2 975 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 CCDC171Q6TFL3 1326 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 CPSF1Q10570 1443 aaKnown RBP10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 ANKARQ7Z5J8 1434 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 SBNO1A3KN83 1393 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 IRF6O14896 467 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 ZCRB1Q8TBF4 217 aaKnown RBP10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 DRC1Q96MC2 740 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 TOMM22Q9NS69 142 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 IFT57Q9NWB7 429 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 KIF1CO43896 1103 aaKnown RBP10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 EZH2Q15910 746 aaKnown RBP10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 ERCC6LQ2NKX8 1250 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 PTF1AQ7RTS3 328 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 PLEKHF1Q96S99 279 aa10.01□□□□□ -0.81
KCNQ3-203ENST00000519589 DLC1Q96QB1 1528 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 TBC1D8O95759 1140 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 CDC25BP30305 580 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 PLCB2Q00722 1185 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 KRT24Q2M2I5 525 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 IP6K1Q92551 441 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 ZSCAN16Q9H4T2 348 aaPredicted RBP10□□□□□ -0.81
KCNQ3-203ENST00000519589 ZCCHC17Q9NP64 241 aaKnown RBP10□□□□□ -0.81
KCNQ3-203ENST00000519589 CCZ1BP86790 482 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 CCZ1P86791 482 aaPredicted RBP10□□□□□ -0.81
KCNQ3-203ENST00000519589 FAM196AQ6ZSG2 479 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 FAM200AQ8TCP9 573 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 ATP10DQ9P241 1426 aa10□□□□□ -0.81
KCNQ3-203ENST00000519589 MED1Q15648 1581 aaPredicted RBP9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 SDSP20132 328 aa9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 OS9Q13438 667 aaPredicted RBP9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 LRRC8AQ8IWT6 810 aa9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 SUFUQ9UMX1 484 aa9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 VAMP4O75379 141 aa9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 TPD52L1Q16890 204 aaPredicted RBP9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 NBPF20Q3BBV1 942 aa9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 RBM43Q6ZSC3 357 aaKnown RBP9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 C8orf58Q8NAV2 365 aa9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 TSPYL4Q9UJ04 414 aa9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 ATF5Q9Y2D1 282 aaPredicted RBP9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 WDR17Q8IZU2 1322 aa9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 TDRD7Q8NHU6 1098 aaKnown RBP9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 RGPD8O14715 1765 aaPredicted RBP9.99□□□□□ -0.81
KCNQ3-203ENST00000519589 ELP1O95163 1332 aa9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 SPATA31A1Q5TZJ5 1347 aa9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 ATP8B1O43520 1251 aa9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 KCNA4P22459 653 aa9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 ARID5BQ14865 1188 aa9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 TTC31Q49AM3 519 aaPredicted RBP9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 SMIM5Q71RC9 77 aa9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 LUZP1Q86V48 1076 aa9.98□□□□□ -0.81
KCNQ3-203ENST00000519589 C16orf71Q8IYS4 520 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms