RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 FOXN1O15353 648 aa20.61■□□□□ 0.89
VPS37A-204ENST00000519381 TNIP1Q15025 636 aa20.61■□□□□ 0.89
VPS37A-204ENST00000519381 CIAPIN1Q6FI81 312 aa20.61■□□□□ 0.89
VPS37A-204ENST00000519381 ZNF428Q96B54 188 aa20.61■□□□□ 0.89
VPS37A-204ENST00000519381 HYPKQ9NX55 129 aa20.61■□□□□ 0.89
VPS37A-204ENST00000519381 ADAMTS8Q9UP79 889 aa20.61■□□□□ 0.89
VPS37A-204ENST00000519381 TRIM35Q9UPQ4 493 aa20.61■□□□□ 0.89
VPS37A-204ENST00000519381 LTBP1Q14766 1721 aa20.61■□□□□ 0.89
VPS37A-204ENST00000519381 RASSF10A6NK89 507 aa20.6■□□□□ 0.89
VPS37A-204ENST00000519381 CALD1Q05682 793 aaKnown RBP20.6■□□□□ 0.89
VPS37A-204ENST00000519381 GRM1Q13255 1194 aa20.6■□□□□ 0.89
VPS37A-204ENST00000519381 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
VPS37A-204ENST00000519381 RTFDC1Q9BY42 306 aaPredicted RBP20.6■□□□□ 0.89
VPS37A-204ENST00000519381 GPRC5DQ9NZD1 345 aa20.6■□□□□ 0.89
VPS37A-204ENST00000519381 GOLGA2Q08379 1002 aa20.59■□□□□ 0.89
VPS37A-204ENST00000519381 KIAA2012Q0VF49 1180 aa20.59■□□□□ 0.89
VPS37A-204ENST00000519381 CFAP44Q96MT7 982 aa20.59■□□□□ 0.89
VPS37A-204ENST00000519381 BEGAINQ9BUH8 593 aa20.59■□□□□ 0.89
VPS37A-204ENST00000519381 RAD17O75943 681 aa20.58■□□□□ 0.89
VPS37A-204ENST00000519381 ECE1P42892 770 aa20.58■□□□□ 0.89
VPS37A-204ENST00000519381 GMPSP49915 693 aaPredicted RBP20.58■□□□□ 0.89
VPS37A-204ENST00000519381 MAP2K1Q02750 393 aaPredicted RBP20.58■□□□□ 0.89
VPS37A-204ENST00000519381 CXCL9Q07325 125 aa20.58■□□□□ 0.89
VPS37A-204ENST00000519381 DUSP27Q5VZP5 1158 aa20.58■□□□□ 0.89
VPS37A-204ENST00000519381 PRDM10Q9NQV6 1147 aa20.58■□□□□ 0.89
VPS37A-204ENST00000519381 CDHR2Q9BYE9 1310 aa20.57■□□□□ 0.88
VPS37A-204ENST00000519381 WDR33Q9C0J8 1336 aaKnown RBP20.57■□□□□ 0.88
VPS37A-204ENST00000519381 ATP5J2-PTCD1G3V325 749 aa20.57■□□□□ 0.88
VPS37A-204ENST00000519381 HSP90B1P14625 803 aaKnown RBP20.57■□□□□ 0.88
VPS37A-204ENST00000519381 RTL5Q5HYW3 569 aaPredicted RBP20.57■□□□□ 0.88
VPS37A-204ENST00000519381 RIC3Q7Z5B4 369 aa20.57■□□□□ 0.88
VPS37A-204ENST00000519381 FAM89AQ96GI7 184 aa20.57■□□□□ 0.88
VPS37A-204ENST00000519381 TRPM7Q96QT4 1865 aa20.56■□□□□ 0.88
VPS37A-204ENST00000519381 TRAF5O00463 557 aa20.55■□□□□ 0.88
VPS37A-204ENST00000519381 WASHC4Q2M389 1173 aa20.55■□□□□ 0.88
VPS37A-204ENST00000519381 MBIPQ9NS73 344 aa20.55■□□□□ 0.88
VPS37A-204ENST00000519381 WBP1LQ9NX94 342 aa20.55■□□□□ 0.88
VPS37A-204ENST00000519381 DDX60Q8IY21 1712 aaKnown RBP20.55■□□□□ 0.88
VPS37A-204ENST00000519381 C6orf229H3BNL8 230 aa20.54■□□□□ 0.88
VPS37A-204ENST00000519381 H7C1D1 291 aa20.54■□□□□ 0.88
VPS37A-204ENST00000519381 IRS4O14654 1257 aaPredicted RBP20.54■□□□□ 0.88
VPS37A-204ENST00000519381 GNAI1P63096 354 aa20.54■□□□□ 0.88
VPS37A-204ENST00000519381 CAPNS2Q96L46 248 aa20.54■□□□□ 0.88
VPS37A-204ENST00000519381 EYA3Q99504 573 aa20.54■□□□□ 0.88
VPS37A-204ENST00000519381 ISCA1Q9BUE6 129 aa20.54■□□□□ 0.88
VPS37A-204ENST00000519381 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
VPS37A-204ENST00000519381 ZNF408Q9H9D4 720 aa20.54■□□□□ 0.88
VPS37A-204ENST00000519381 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
VPS37A-204ENST00000519381 G3V3G9 751 aa20.53■□□□□ 0.88
VPS37A-204ENST00000519381 CELF2O95319 508 aaKnown RBP20.53■□□□□ 0.88
VPS37A-204ENST00000519381 LBX1P52954 281 aa20.53■□□□□ 0.88
VPS37A-204ENST00000519381 DCAF8Q5TAQ9 597 aa20.53■□□□□ 0.88
VPS37A-204ENST00000519381 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
VPS37A-204ENST00000519381 IFT57Q9NWB7 429 aa20.53■□□□□ 0.88
VPS37A-204ENST00000519381 TAF1P21675 1872 aa20.53■□□□□ 0.88
VPS37A-204ENST00000519381 LRRC37AA6NMS7 1700 aa20.53■□□□□ 0.88
VPS37A-204ENST00000519381 FMR1Q06787 632 aaKnown RBP eCLIP20.52■□□□□ 0.88
VPS37A-204ENST00000519381 ELL2O00472 640 aaPredicted RBP20.51■□□□□ 0.87
VPS37A-204ENST00000519381 APAF1O14727 1248 aa20.51■□□□□ 0.87
VPS37A-204ENST00000519381 RIMBP2O15034 1052 aa20.51■□□□□ 0.87
VPS37A-204ENST00000519381 SF3B3Q15393 1217 aaKnown RBP20.51■□□□□ 0.87
VPS37A-204ENST00000519381 CYP4F22Q6NT55 531 aa20.51■□□□□ 0.87
VPS37A-204ENST00000519381 CELF1Q92879 486 aaKnown RBP20.51■□□□□ 0.87
VPS37A-204ENST00000519381 CNOT7Q9UIV1 285 aaKnown RBP20.51■□□□□ 0.87
VPS37A-204ENST00000519381 TLL2Q9Y6L7 1015 aa20.51■□□□□ 0.87
VPS37A-204ENST00000519381 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
VPS37A-204ENST00000519381 MICALL2Q8IY33 904 aa20.5■□□□□ 0.87
VPS37A-204ENST00000519381 ZC3H15Q8WU90 426 aaKnown RBP20.5■□□□□ 0.87
VPS37A-204ENST00000519381 GPR101Q96P66 508 aaPredicted RBP20.5■□□□□ 0.87
VPS37A-204ENST00000519381 GLIS2Q9BZE0 524 aaPredicted RBP20.5■□□□□ 0.87
VPS37A-204ENST00000519381 DBNDD1Q9H9R9 158 aa20.5■□□□□ 0.87
VPS37A-204ENST00000519381 DUOX1Q9NRD9 1551 aa20.5■□□□□ 0.87
VPS37A-204ENST00000519381 CDC37L1Q7L3B6 337 aa20.49■□□□□ 0.87
VPS37A-204ENST00000519381 MYD88Q99836 296 aa20.49■□□□□ 0.87
VPS37A-204ENST00000519381 YDJCA8MPS7 323 aa20.48■□□□□ 0.87
VPS37A-204ENST00000519381 HSPA8P11142 646 aaKnown RBP20.48■□□□□ 0.87
VPS37A-204ENST00000519381 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
VPS37A-204ENST00000519381 GPSM2P81274 684 aa20.48■□□□□ 0.87
VPS37A-204ENST00000519381 TRIM28Q13263 835 aaKnown RBP20.48■□□□□ 0.87
VPS37A-204ENST00000519381 CCDC152Q4G0S7 254 aa20.48■□□□□ 0.87
VPS37A-204ENST00000519381 CST9Q5W186 159 aa20.48■□□□□ 0.87
VPS37A-204ENST00000519381 ZBTB38Q8NAP3 1195 aaPredicted RBP20.48■□□□□ 0.87
VPS37A-204ENST00000519381 TRPM4Q8TD43 1214 aa20.48■□□□□ 0.87
VPS37A-204ENST00000519381 ANKIB1Q9P2G1 1089 aa20.48■□□□□ 0.87
VPS37A-204ENST00000519381 PSMD14O00487 310 aa20.47■□□□□ 0.87
VPS37A-204ENST00000519381 ECE2O60344 883 aa20.47■□□□□ 0.87
VPS37A-204ENST00000519381 CCDC30Q5VVM6 783 aa20.47■□□□□ 0.87
VPS37A-204ENST00000519381 ZC3H12CQ9C0D7 883 aaKnown RBP20.47■□□□□ 0.87
VPS37A-204ENST00000519381 PHAXQ9H814 394 aaKnown RBP20.47■□□□□ 0.87
VPS37A-204ENST00000519381 ZBTB12Q9Y330 459 aaPredicted RBP20.47■□□□□ 0.87
VPS37A-204ENST00000519381 THSD7BQ9C0I4 1608 aa20.46■□□□□ 0.87
VPS37A-204ENST00000519381 UFL1O94874 794 aa20.46■□□□□ 0.87
VPS37A-204ENST00000519381 CCDC191Q8NCU4 936 aa20.46■□□□□ 0.87
VPS37A-204ENST00000519381 CWC25Q9NXE8 425 aaPredicted RBP20.46■□□□□ 0.87
VPS37A-204ENST00000519381 ZNF853P0CG23 659 aa20.45■□□□□ 0.86
VPS37A-204ENST00000519381 RPS12P25398 132 aaKnown RBP20.45■□□□□ 0.86
VPS37A-204ENST00000519381 DOK7Q18PE1 504 aa20.45■□□□□ 0.86
VPS37A-204ENST00000519381 DPF2Q92785 391 aa20.45■□□□□ 0.86
VPS37A-204ENST00000519381 GGA1Q9UJY5 639 aa20.45■□□□□ 0.86
VPS37A-204ENST00000519381 PDE8AO60658 829 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms