RNA–Protein interactions for RNA: ENST00000519259.5

SREK1-206, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 9,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-206ENST00000519259 USP32Q8NFA0 1604 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 LTBP3Q9NS15 1303 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 E9PCH4 1651 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 GNAT2P19087 354 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 CENPQQ7L2Z9 268 aaPredicted RBP4.62□□□□□ -1.67
SREK1-206ENST00000519259 AGBL3Q8NEM8 1001 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 TBC1D2Q9BYX2 928 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 RNF41Q9H4P4 317 aaPredicted RBP4.62□□□□□ -1.67
SREK1-206ENST00000519259 RRP1P56182 461 aaKnown RBP4.62□□□□□ -1.67
SREK1-206ENST00000519259 CLUAP1Q96AJ1 413 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 PSMD1Q99460 953 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 UFL1O94874 794 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 KIAA2012Q0VF49 1180 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 MTX1Q13505 466 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 C15orf52Q6ZUT6 534 aaKnown RBP4.62□□□□□ -1.67
SREK1-206ENST00000519259 SSH1Q8WYL5 1049 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 SUSD4Q5VX71 490 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 LINC00116Q8NCU8 138 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 ZC3H15Q8WU90 426 aaKnown RBP4.62□□□□□ -1.67
SREK1-206ENST00000519259 BSDC1Q9NW68 430 aaPredicted RBP4.62□□□□□ -1.67
SREK1-206ENST00000519259 NOB1Q9ULX3 412 aaKnown RBP4.62□□□□□ -1.67
SREK1-206ENST00000519259 FER1L4A9Z1Z3 1794 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 KIF13AQ9H1H9 1805 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 DZIP1Q86YF9 867 aaKnown RBP4.62□□□□□ -1.67
SREK1-206ENST00000519259 SULF1Q8IWU6 871 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 ANKRD44Q8N8A2 993 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 ITPK1Q13572 414 aa4.62□□□□□ -1.67
SREK1-206ENST00000519259 PPP1R12BO60237 982 aaPredicted RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 DPEP1P16444 411 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 BEND3Q5T5X7 828 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 SYNE4Q8N205 404 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 HACL1Q9UJ83 578 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 LRRFIP2Q9Y608 721 aaKnown RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 ATP5J2-PTCD1G3V325 749 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 CSF1RP07333 972 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 CNTROBQ8N137 903 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 MPHOSPH6Q99547 160 aaKnown RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 C3P01024 1663 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 ERICH2A1L162 156 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 UBE3BQ7Z3V4 1068 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 C2orf69Q8N8R5 385 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 SYT17Q9BSW7 474 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 DIAPH3Q9NSV4 1193 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 PDIA4P13667 645 aaKnown RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 ZKSCAN1P17029 563 aaPredicted RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 PUM3Q15397 648 aaKnown RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 FOXP4Q8IVH2 680 aaPredicted RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 CRNKL1Q9BZJ0 848 aaKnown RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 RAD50Q92878 1312 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 SART3Q15020 963 aaKnown RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 APOBEC3FQ8IUX4 373 aaKnown RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 GTF3C2Q8WUA4 911 aaPredicted RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 LRP2BPQ9P2M1 347 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 RTL9Q8NET4 1388 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 FDX1P10109 184 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 ITGA6P23229 1130 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 ZSCAN29Q8IWY8 852 aaPredicted RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 MRIQ9BWK5 157 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 FKBP1BP68106 108 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 INTS5Q6P9B9 1019 aaKnown RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 USP50Q70EL3 339 aaPredicted RBP4.61□□□□□ -1.67
SREK1-206ENST00000519259 ECHDC1Q9NTX5 307 aa4.61□□□□□ -1.67
SREK1-206ENST00000519259 KIF22Q14807 665 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 ERFEQ4G0M1 354 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 CCDC17Q96LX7 622 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 NEURL1BA8MQ27 555 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 ALDH1A1P00352 501 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 CTSWP56202 376 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 COG6Q9Y2V7 657 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 PNPLA7Q6ZV29 1317 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 CHAF1AQ13111 956 aaPredicted RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 TTLL7Q6ZT98 887 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 DNAJC2Q99543 621 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 PODXL2Q9NZ53 605 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 SRP68Q9UHB9 627 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 RIC1Q4ADV7 1423 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 NTSR2O95665 410 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 RBM5P52756 815 aaKnown RBP eCLIP4.6□□□□□ -1.67
SREK1-206ENST00000519259 FSTL1Q12841 308 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 TRMT2AQ8IZ69 625 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 MIS18AQ9NYP9 233 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 RPAP1Q9BWH6 1393 aaPredicted RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 POLRMTO00411 1230 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 KCNQ3O43525 872 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 ENTPD3O75355 529 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 KRT32Q14532 448 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.6□□□□□ -1.67
SREK1-206ENST00000519259 CRACR2BQ8N4Y2 399 aaPredicted RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 TTC41PQ6P2S7 1318 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 TCERG1O14776 1098 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 SRGNP10124 158 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 MCTP2Q6DN12 878 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 RHPN1Q8TCX5 695 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 NOP58Q9Y2X3 529 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 PLIN1O60240 522 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 LDHBP07195 334 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 FKBP8Q14318 412 aa4.6□□□□□ -1.67
SREK1-206ENST00000519259 CCAR1Q8IX12 1150 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 TNPO1Q92973 898 aaKnown RBP4.6□□□□□ -1.67
SREK1-206ENST00000519259 FAM89AQ96GI7 184 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms