RNA–Protein interactions for RNA: ENST00000518692.1

SPIDR-207, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 726 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-207ENST00000518692 SF3B3Q15393 1217 aaKnown RBP22.62■■□□□ 1.21
SPIDR-207ENST00000518692 IFFO2Q5TF58 517 aa22.62■■□□□ 1.21
SPIDR-207ENST00000518692 DPP8Q6V1X1 898 aaPredicted RBP22.62■■□□□ 1.21
SPIDR-207ENST00000518692 MPNDQ8N594 471 aa22.62■■□□□ 1.21
SPIDR-207ENST00000518692 CELF1Q92879 486 aaKnown RBP22.62■■□□□ 1.21
SPIDR-207ENST00000518692 TMX4Q9H1E5 349 aaPredicted RBP22.62■■□□□ 1.21
SPIDR-207ENST00000518692 DUOX1Q9NRD9 1551 aa22.62■■□□□ 1.21
SPIDR-207ENST00000518692 LRRC37AA6NMS7 1700 aa22.62■■□□□ 1.21
SPIDR-207ENST00000518692 EPS15P42566 896 aa22.61■■□□□ 1.21
SPIDR-207ENST00000518692 GOLGA2Q08379 1002 aa22.61■■□□□ 1.21
SPIDR-207ENST00000518692 MYD88Q99836 296 aa22.61■■□□□ 1.21
SPIDR-207ENST00000518692 VPS33BQ9H267 617 aa22.61■■□□□ 1.21
SPIDR-207ENST00000518692 CREBZFQ9NS37 354 aa22.61■■□□□ 1.21
SPIDR-207ENST00000518692 CLEC11AQ9Y240 323 aa22.61■■□□□ 1.21
SPIDR-207ENST00000518692 ZNF316A6NFI3 1004 aaPredicted RBP22.6■■□□□ 1.21
SPIDR-207ENST00000518692 CCDC27Q2M243 656 aa22.6■■□□□ 1.21
SPIDR-207ENST00000518692 MAP1SQ66K74 1059 aaPredicted RBP22.6■■□□□ 1.21
SPIDR-207ENST00000518692 PNMA8AQ86V59 439 aaPredicted RBP22.6■■□□□ 1.21
SPIDR-207ENST00000518692 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
SPIDR-207ENST00000518692 SUPT20HQ8NEM7 779 aa22.6■■□□□ 1.21
SPIDR-207ENST00000518692 IRS4O14654 1257 aaPredicted RBP22.59■■□□□ 1.21
SPIDR-207ENST00000518692 CXCL9Q07325 125 aa22.59■■□□□ 1.21
SPIDR-207ENST00000518692 KIAA2012Q0VF49 1180 aa22.58■■□□□ 1.21
SPIDR-207ENST00000518692 CCDC30Q5VVM6 783 aa22.58■■□□□ 1.21
SPIDR-207ENST00000518692 ZBTB38Q8NAP3 1195 aaPredicted RBP22.58■■□□□ 1.21
SPIDR-207ENST00000518692 MRS2Q9HD23 443 aa22.58■■□□□ 1.21
SPIDR-207ENST00000518692 MKRN1Q9UHC7 482 aaKnown RBP22.58■■□□□ 1.21
SPIDR-207ENST00000518692 ZNRF3Q9ULT6 936 aa22.58■■□□□ 1.21
SPIDR-207ENST00000518692 CNTROBQ8N137 903 aa22.57■■□□□ 1.2
SPIDR-207ENST00000518692 JARID2Q92833 1246 aaPredicted RBP22.57■■□□□ 1.2
SPIDR-207ENST00000518692 LMOD1P29536 600 aaPredicted RBP22.56■■□□□ 1.2
SPIDR-207ENST00000518692 TMC4Q7Z404 712 aa22.56■■□□□ 1.2
SPIDR-207ENST00000518692 METTL22Q9BUU2 404 aaPredicted RBP22.56■■□□□ 1.2
SPIDR-207ENST00000518692 YDJCA8MPS7 323 aa22.55■■□□□ 1.2
SPIDR-207ENST00000518692 ANP32CO43423 234 aa22.54■■□□□ 1.2
SPIDR-207ENST00000518692 PCCAP05165 728 aaPredicted RBP22.54■■□□□ 1.2
SPIDR-207ENST00000518692 GPSM2P81274 684 aa22.54■■□□□ 1.2
SPIDR-207ENST00000518692 CCDC191Q8NCU4 936 aa22.54■■□□□ 1.2
SPIDR-207ENST00000518692 SEC31BQ9NQW1 1179 aa22.54■■□□□ 1.2
SPIDR-207ENST00000518692 GPRC5DQ9NZD1 345 aa22.54■■□□□ 1.2
SPIDR-207ENST00000518692 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
SPIDR-207ENST00000518692 CNTNAP1P78357 1384 aa22.53■■□□□ 1.2
SPIDR-207ENST00000518692 TMEM88BA6NKF7 163 aa22.53■■□□□ 1.2
SPIDR-207ENST00000518692 RAD17O75943 681 aa22.53■■□□□ 1.2
SPIDR-207ENST00000518692 HSPA1AP0DMV8 641 aaKnown RBP22.53■■□□□ 1.2
SPIDR-207ENST00000518692 HSPA1BP0DMV9 641 aaKnown RBP22.53■■□□□ 1.2
SPIDR-207ENST00000518692 GMPSP49915 693 aaPredicted RBP22.53■■□□□ 1.2
SPIDR-207ENST00000518692 FMR1Q06787 632 aaKnown RBP eCLIP22.53■■□□□ 1.2
SPIDR-207ENST00000518692 G2E3Q7L622 706 aa22.53■■□□□ 1.2
SPIDR-207ENST00000518692 CWC25Q9NXE8 425 aaPredicted RBP22.53■■□□□ 1.2
SPIDR-207ENST00000518692 POLLQ9UGP5 575 aa22.53■■□□□ 1.2
SPIDR-207ENST00000518692 NSFL1CQ9UNZ2 370 aaKnown RBP22.53■■□□□ 1.2
SPIDR-207ENST00000518692 PI4KAP2A4QPH2 592 aa22.52■■□□□ 1.2
SPIDR-207ENST00000518692 DDX58O95786 925 aaKnown RBP22.52■■□□□ 1.2
SPIDR-207ENST00000518692 IGKV5-2P06315 115 aa22.52■■□□□ 1.2
SPIDR-207ENST00000518692 RPS8P62241 208 aaKnown RBP22.52■■□□□ 1.2
SPIDR-207ENST00000518692 TWISTNBQ3B726 338 aaPredicted RBP22.52■■□□□ 1.2
SPIDR-207ENST00000518692 CIAPIN1Q6FI81 312 aa22.52■■□□□ 1.2
SPIDR-207ENST00000518692 KSR2Q6VAB6 950 aa22.52■■□□□ 1.2
SPIDR-207ENST00000518692 PI4KAP1Q8N8J0 262 aa22.52■■□□□ 1.2
SPIDR-207ENST00000518692 IL16Q14005 1332 aa22.52■■□□□ 1.2
SPIDR-207ENST00000518692 NCBP3Q53F19 620 aaKnown RBP22.51■■□□□ 1.19
SPIDR-207ENST00000518692 COL13A1Q5TAT6 717 aaPredicted RBP22.51■■□□□ 1.19
SPIDR-207ENST00000518692 USP50Q70EL3 339 aaPredicted RBP22.51■■□□□ 1.19
SPIDR-207ENST00000518692 SALL2Q9Y467 1007 aaPredicted RBP22.51■■□□□ 1.19
SPIDR-207ENST00000518692 GPR101Q96P66 508 aaPredicted RBP22.5■■□□□ 1.19
SPIDR-207ENST00000518692 CCDC85AQ96PX6 553 aaPredicted RBP22.5■■□□□ 1.19
SPIDR-207ENST00000518692 CHMP4AQ9BY43 222 aa22.5■■□□□ 1.19
SPIDR-207ENST00000518692 ADARB2Q9NS39 739 aaKnown RBP22.5■■□□□ 1.19
SPIDR-207ENST00000518692 SHTN1A0MZ66 631 aa22.49■■□□□ 1.19
SPIDR-207ENST00000518692 RIMBP2O15034 1052 aa22.49■■□□□ 1.19
SPIDR-207ENST00000518692 PDE8AO60658 829 aa22.49■■□□□ 1.19
SPIDR-207ENST00000518692 WASHC4Q2M389 1173 aa22.49■■□□□ 1.19
SPIDR-207ENST00000518692 DBNDD1Q9H9R9 158 aa22.49■■□□□ 1.19
SPIDR-207ENST00000518692 FANCIQ9NVI1 1328 aa22.49■■□□□ 1.19
SPIDR-207ENST00000518692 C6orf229H3BNL8 230 aa22.48■■□□□ 1.19
SPIDR-207ENST00000518692 TBC1D16Q8TBP0 767 aa22.48■■□□□ 1.19
SPIDR-207ENST00000518692 STK31Q9BXU1 1019 aa22.48■■□□□ 1.19
SPIDR-207ENST00000518692 TRAF5O00463 557 aa22.47■■□□□ 1.19
SPIDR-207ENST00000518692 SLC4A2P04920 1241 aa22.47■■□□□ 1.19
SPIDR-207ENST00000518692 VEGFBP49765 207 aa22.47■■□□□ 1.19
SPIDR-207ENST00000518692 CWF19L2Q2TBE0 894 aaKnown RBP22.47■■□□□ 1.19
SPIDR-207ENST00000518692 CDHR2Q9BYE9 1310 aa22.47■■□□□ 1.19
SPIDR-207ENST00000518692 HIRAP54198 1017 aaPredicted RBP22.46■■□□□ 1.19
SPIDR-207ENST00000518692 TNIP1Q15025 636 aa22.46■■□□□ 1.19
SPIDR-207ENST00000518692 CCDC152Q4G0S7 254 aa22.46■■□□□ 1.19
SPIDR-207ENST00000518692 BCL2L13Q9BXK5 485 aa22.46■■□□□ 1.19
SPIDR-207ENST00000518692 KCNQ5Q9NR82 932 aa22.46■■□□□ 1.19
SPIDR-207ENST00000518692 ZBTB12Q9Y330 459 aaPredicted RBP22.46■■□□□ 1.19
SPIDR-207ENST00000518692 PSMD14O00487 310 aa22.45■■□□□ 1.18
SPIDR-207ENST00000518692 HSP90B1P14625 803 aaKnown RBP22.45■■□□□ 1.18
SPIDR-207ENST00000518692 DOK7Q18PE1 504 aa22.45■■□□□ 1.18
SPIDR-207ENST00000518692 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
SPIDR-207ENST00000518692 TRPM4Q8TD43 1214 aa22.45■■□□□ 1.18
SPIDR-207ENST00000518692 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
SPIDR-207ENST00000518692 PODXL2Q9NZ53 605 aa22.45■■□□□ 1.18
SPIDR-207ENST00000518692 TRPM7Q96QT4 1865 aa22.45■■□□□ 1.18
SPIDR-207ENST00000518692 SCN9AQ15858 1988 aa22.45■■□□□ 1.18
SPIDR-207ENST00000518692 RASSF10A6NK89 507 aa22.44■■□□□ 1.18
SPIDR-207ENST00000518692 NEURL1BA8MQ27 555 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms