RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 ADH6P28332 368 aa10.13□□□□□ -0.79
CPNE3-201ENST00000517354 PDE12Q6L8Q7 609 aaKnown RBP10.13□□□□□ -0.79
CPNE3-201ENST00000517354 ELP3Q9H9T3 547 aa10.13□□□□□ -0.79
CPNE3-201ENST00000517354 ARAFP10398 606 aa10.12□□□□□ -0.79
CPNE3-201ENST00000517354 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
CPNE3-201ENST00000517354 ZNF468Q5VIY5 522 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-201ENST00000517354 OXCT2Q9BYC2 517 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-201ENST00000517354 AVENQ9NQS1 362 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-201ENST00000517354 GDF2Q9UK05 429 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-201ENST00000517354 HCN2Q9UL51 889 aa10.12□□□□□ -0.79
CPNE3-201ENST00000517354 PSAPP07602 524 aa10.11□□□□□ -0.79
CPNE3-201ENST00000517354 ALAS2P22557 587 aa10.11□□□□□ -0.79
CPNE3-201ENST00000517354 KRT76Q01546 638 aa10.11□□□□□ -0.79
CPNE3-201ENST00000517354 TRIP4Q15650 581 aaPredicted RBP10.11□□□□□ -0.79
CPNE3-201ENST00000517354 GOLGA6L1Q8N7Z2 621 aa10.11□□□□□ -0.79
CPNE3-201ENST00000517354 UBE2OQ9C0C9 1292 aaKnown RBP10.11□□□□□ -0.79
CPNE3-201ENST00000517354 A6NHS1 94 aa10.1□□□□□ -0.79
CPNE3-201ENST00000517354 NEURL1BA8MQ27 555 aa10.1□□□□□ -0.79
CPNE3-201ENST00000517354 PLCB3Q01970 1234 aa10.1□□□□□ -0.79
CPNE3-201ENST00000517354 XKR5Q6UX68 686 aa10.1□□□□□ -0.79
CPNE3-201ENST00000517354 GJD3Q8N144 294 aa10.1□□□□□ -0.79
CPNE3-201ENST00000517354 DMRTB1Q96MA1 342 aa10.1□□□□□ -0.79
CPNE3-201ENST00000517354 RBCK1Q9BYM8 510 aa10.1□□□□□ -0.79
CPNE3-201ENST00000517354 GGA1Q9UJY5 639 aa10.1□□□□□ -0.79
CPNE3-201ENST00000517354 SIN3BO75182 1162 aa10.09□□□□□ -0.79
CPNE3-201ENST00000517354 PCSK7Q16549 785 aa10.09□□□□□ -0.79
CPNE3-201ENST00000517354 PMEPA1Q969W9 287 aa10.09□□□□□ -0.79
CPNE3-201ENST00000517354 ABI2Q9NYB9 513 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-201ENST00000517354 PHF20L1A8MW92 1017 aa10.08□□□□□ -0.8
CPNE3-201ENST00000517354 MAP3K6O95382 1288 aa10.08□□□□□ -0.8
CPNE3-201ENST00000517354 MAP3K10Q02779 954 aa10.08□□□□□ -0.8
CPNE3-201ENST00000517354 DHX32Q7L7V1 743 aaKnown RBP10.08□□□□□ -0.8
CPNE3-201ENST00000517354 NIF3L1Q9GZT8 377 aa10.08□□□□□ -0.8
CPNE3-201ENST00000517354 TLR7Q9NYK1 1049 aaKnown RBP10.08□□□□□ -0.8
CPNE3-201ENST00000517354 MMP20O60882 483 aa10.07□□□□□ -0.8
CPNE3-201ENST00000517354 PHACTR2O75167 634 aa10.07□□□□□ -0.8
CPNE3-201ENST00000517354 TMC7Q7Z402 723 aa10.07□□□□□ -0.8
CPNE3-201ENST00000517354 ZFATQ9P243 1243 aa10.07□□□□□ -0.8
CPNE3-201ENST00000517354 CES1P23141 567 aa10.06□□□□□ -0.8
CPNE3-201ENST00000517354 PLAURQ03405 335 aa10.06□□□□□ -0.8
CPNE3-201ENST00000517354 GALNT6Q8NCL4 622 aa10.06□□□□□ -0.8
CPNE3-201ENST00000517354 ACDQ96AP0 544 aa10.06□□□□□ -0.8
CPNE3-201ENST00000517354 ASB16Q96NS5 453 aa10.06□□□□□ -0.8
CPNE3-201ENST00000517354 TMEM63CQ9P1W3 806 aa10.06□□□□□ -0.8
CPNE3-201ENST00000517354 SLURP2P0DP57 97 aa10.05□□□□□ -0.8
CPNE3-201ENST00000517354 BCRP11274 1271 aa10.05□□□□□ -0.8
CPNE3-201ENST00000517354 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
CPNE3-201ENST00000517354 EDARADDQ8WWZ3 215 aa10.05□□□□□ -0.8
CPNE3-201ENST00000517354 SPACA7Q96KW9 195 aa10.05□□□□□ -0.8
CPNE3-201ENST00000517354 FAM129BQ96TA1 746 aa10.05□□□□□ -0.8
CPNE3-201ENST00000517354 ENAMQ9NRM1 1142 aa10.05□□□□□ -0.8
CPNE3-201ENST00000517354 TNFRSF21O75509 655 aa10.04□□□□□ -0.8
CPNE3-201ENST00000517354 AMPD1P23109 780 aa10.04□□□□□ -0.8
CPNE3-201ENST00000517354 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
CPNE3-201ENST00000517354 HYAL2Q12891 473 aa10.04□□□□□ -0.8
CPNE3-201ENST00000517354 SNX29Q8TEQ0 813 aa10.04□□□□□ -0.8
CPNE3-201ENST00000517354 RBSNQ9H1K0 784 aa10.04□□□□□ -0.8
CPNE3-201ENST00000517354 DNAJB12Q9NXW2 375 aaKnown RBP10.04□□□□□ -0.8
CPNE3-201ENST00000517354 KLF15Q9UIH9 416 aa10.04□□□□□ -0.8
CPNE3-201ENST00000517354 NCAPG2Q86XI2 1143 aa10.03□□□□□ -0.8
CPNE3-201ENST00000517354 SVOPQ8N4V2 548 aa10.03□□□□□ -0.8
CPNE3-201ENST00000517354 C1orf127Q8N9H9 656 aa10.03□□□□□ -0.8
CPNE3-201ENST00000517354 OR13H1Q8NG92 308 aa10.03□□□□□ -0.8
CPNE3-201ENST00000517354 CNTN3Q9P232 1028 aa10.03□□□□□ -0.8
CPNE3-201ENST00000517354 ELOA3CA0A087WX78 387 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-201ENST00000517354 ANKRD33BA6NCL7 494 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 ELOA3DA6NLF2 546 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-201ENST00000517354 GHRHP01286 108 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 CELA2BP08218 269 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-201ENST00000517354 ERCC3P19447 782 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 ADH7P40394 386 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 NRLP54845 237 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 MLLT1Q03111 559 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-201ENST00000517354 ELOA3BQ3SY89 546 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 LYPD4Q6UWN0 246 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 SLCO4C1Q6ZQN7 724 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 ELOA3Q8NG57 546 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 NEDD1Q8NHV4 660 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 TNFRSF25Q93038 417 aa10.02□□□□□ -0.81
CPNE3-201ENST00000517354 FOXD3Q9UJU5 478 aaPredicted RBP10.02□□□□□ -0.81
CPNE3-201ENST00000517354 LOC102724428A0A0B4J2F2 783 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 ADARB2-AS1A8MUL3 147 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 OIP5O43482 229 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 WIPF1O43516 503 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 CPNE3O75131 537 aaKnown RBP10.01□□□□□ -0.81
CPNE3-201ENST00000517354 MAPK8P45983 427 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 SIK1P57059 783 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 INSM1Q01101 510 aaPredicted RBP10.01□□□□□ -0.81
CPNE3-201ENST00000517354 LCE2AQ5TA79 106 aaPredicted RBP10.01□□□□□ -0.81
CPNE3-201ENST00000517354 HFE2Q6ZVN8 426 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 FAM35AQ86V20 835 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 TRPM4Q8TD43 1214 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 NSUN5Q96P11 429 aaKnown RBP10.01□□□□□ -0.81
CPNE3-201ENST00000517354 ZFYVE28Q9HCC9 887 aa10.01□□□□□ -0.81
CPNE3-201ENST00000517354 GPR182O15218 404 aa10□□□□□ -0.81
CPNE3-201ENST00000517354 CPB1P15086 417 aa10□□□□□ -0.81
CPNE3-201ENST00000517354 SOX18P35713 384 aa10□□□□□ -0.81
CPNE3-201ENST00000517354 FCHSD1Q86WN1 690 aa10□□□□□ -0.81
CPNE3-201ENST00000517354 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms