RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 APLP1P51693 650 aa7.67□□□□□ -1.18
SCARNA18.1-201ENST00000516330 CCDC152Q4G0S7 254 aa7.67□□□□□ -1.18
SCARNA18.1-201ENST00000516330 SP8Q8IXZ3 490 aa7.67□□□□□ -1.18
SCARNA18.1-201ENST00000516330 FAM9BQ8IZU0 186 aa7.67□□□□□ -1.18
SCARNA18.1-201ENST00000516330 GPC2Q8N158 579 aa7.67□□□□□ -1.18
SCARNA18.1-201ENST00000516330 PI4KAP2A4QPH2 592 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 ELL2O00472 640 aaPredicted RBP7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 EIF6P56537 245 aaKnown RBP7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 KIAA2012Q0VF49 1180 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 FKBP5Q13451 457 aaPredicted RBP7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 NIM1KQ8IY84 436 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 PI4KAP1Q8N8J0 262 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 LINS1Q8NG48 757 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 DNAAF4Q8WXU2 420 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 FAM89AQ96GI7 184 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 CDC5LQ99459 802 aaKnown RBP7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 MYD88Q99836 296 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 PLA2G12BQ9BX93 195 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 MAP3K2Q9Y2U5 619 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 A0A1B0GUL6 1792 aa7.66□□□□□ -1.18
SCARNA18.1-201ENST00000516330 NEURL1BA8MQ27 555 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 ATP5J2-PTCD1G3V325 749 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 PPIP5K2O43314 1243 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 VAMP4O75379 141 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 SLC4A2P04920 1241 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 IGKV5-2P06315 115 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 PTPRCP08575 1304 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 HCLS1P14317 486 aaPredicted RBP7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 CTSWP56202 376 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 DPP8Q6V1X1 898 aaPredicted RBP7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 C3orf67Q6ZVT6 689 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 PNMA8AQ86V59 439 aaPredicted RBP7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 SYNE4Q8N205 404 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 LARGE2Q8N3Y3 721 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 EYA3Q99504 573 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 ZNF277Q9NRM2 450 aaPredicted RBP7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 PODXL2Q9NZ53 605 aa7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 ZNF219Q9P2Y4 722 aaPredicted RBP7.65□□□□□ -1.18
SCARNA18.1-201ENST00000516330 SPEF2Q9C093 1822 aa7.64□□□□□ -1.19
SCARNA18.1-201ENST00000516330 COL4A1P02462 1669 aa7.64□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ZNF541Q9H0D2 1346 aa7.64□□□□□ -1.19
SCARNA18.1-201ENST00000516330 EXOSC9Q06265 439 aaKnown RBP7.64□□□□□ -1.19
SCARNA18.1-201ENST00000516330 LDHDQ86WU2 507 aa7.64□□□□□ -1.19
SCARNA18.1-201ENST00000516330 MPNDQ8N594 471 aa7.64□□□□□ -1.19
SCARNA18.1-201ENST00000516330 RRAGCQ9HB90 399 aa7.64□□□□□ -1.19
SCARNA18.1-201ENST00000516330 HACL1Q9UJ83 578 aa7.64□□□□□ -1.19
SCARNA18.1-201ENST00000516330 THSD7BQ9C0I4 1608 aa7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 MED23Q9ULK4 1368 aa7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 XDHP47989 1333 aa7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 DDNO94850 711 aaPredicted RBP7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 LMOD1P29536 600 aaPredicted RBP7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 GCKRQ14397 625 aa7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ALDH1L2Q3SY69 923 aa7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ANKRD18AQ8IVF6 992 aa7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 CELF1Q92879 486 aaKnown RBP7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 TAF1P21675 1872 aa7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ARAP2Q8WZ64 1704 aa7.63□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ZNF646O15015 1829 aaPredicted RBP7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 KIF16BQ96L93 1317 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 POTECB2RU33 542 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 H7C1W4 665 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ALDH1L1O75891 902 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 RPS12P25398 132 aaKnown RBP7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 EPHX2P34913 555 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 RPS8P62241 208 aaKnown RBP7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 AOC3Q16853 763 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 CWF19L2Q2TBE0 894 aaKnown RBP7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 CHADLQ6NUI6 762 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 OLFM4Q6UX06 510 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 UBE3BQ7Z3V4 1068 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 TAF1DQ9H5J8 278 aaPredicted RBP7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 SPINK5Q9NQ38 1064 aaPredicted RBP7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ZNRF3Q9ULT6 936 aa7.62□□□□□ -1.19
SCARNA18.1-201ENST00000516330 CEP350Q5VT06 3117 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 GRM8O00222 908 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 IGHMBP2P38935 993 aaKnown RBP7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 SCNN1DP51172 638 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 BRPF1P55201 1214 aaPredicted RBP7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 CASP7P55210 303 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 SLFN5Q08AF3 891 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 TNIP1Q15025 636 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 WASHC4Q2M389 1173 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 BEND3Q5T5X7 828 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 CIAPIN1Q6FI81 312 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 USP50Q70EL3 339 aaPredicted RBP7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 G2E3Q7L622 706 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 TTLL11Q8NHH1 800 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ADARB2Q9NS39 739 aaKnown RBP7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 BSDC1Q9NW68 430 aaPredicted RBP7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 GGA1Q9UJY5 639 aa7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 SALL2Q9Y467 1007 aaPredicted RBP7.61□□□□□ -1.19
SCARNA18.1-201ENST00000516330 UTYO14607 1347 aa7.6□□□□□ -1.19
SCARNA18.1-201ENST00000516330 MYO3BQ8WXR4 1341 aa7.6□□□□□ -1.19
SCARNA18.1-201ENST00000516330 PASKQ96RG2 1323 aa7.6□□□□□ -1.19
SCARNA18.1-201ENST00000516330 CSF1RP07333 972 aa7.6□□□□□ -1.19
SCARNA18.1-201ENST00000516330 ATP2B4P23634 1241 aa7.6□□□□□ -1.19
SCARNA18.1-201ENST00000516330 MMP14P50281 582 aa7.6□□□□□ -1.19
SCARNA18.1-201ENST00000516330 RTL5Q5HYW3 569 aaPredicted RBP7.6□□□□□ -1.19
SCARNA18.1-201ENST00000516330 TRMT2AQ8IZ69 625 aaKnown RBP7.6□□□□□ -1.19
SCARNA18.1-201ENST00000516330 DPF2Q92785 391 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms