RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 MRPL50Q8N5N7 158 aaKnown RBP24.66■■□□□ 1.54
LMNA-225ENST00000515824 H7C1W4 665 aa24.65■■□□□ 1.54
LMNA-225ENST00000515824 CCDC152Q4G0S7 254 aa24.65■■□□□ 1.54
LMNA-225ENST00000515824 SSH1Q8WYL5 1049 aa24.65■■□□□ 1.54
LMNA-225ENST00000515824 ZNF277Q9NRM2 450 aaPredicted RBP24.65■■□□□ 1.54
LMNA-225ENST00000515824 ALDH1L2Q3SY69 923 aa24.64■■□□□ 1.54
LMNA-225ENST00000515824 DPY19L2Q6NUT2 758 aa24.64■■□□□ 1.54
LMNA-225ENST00000515824 DDX60Q8IY21 1712 aaKnown RBP24.64■■□□□ 1.53
LMNA-225ENST00000515824 IARSP41252 1262 aaKnown RBP24.63■■□□□ 1.53
LMNA-225ENST00000515824 BEND3Q5T5X7 828 aa24.63■■□□□ 1.53
LMNA-225ENST00000515824 UBE3BQ7Z3V4 1068 aa24.63■■□□□ 1.53
LMNA-225ENST00000515824 CELF1Q92879 486 aaKnown RBP24.63■■□□□ 1.53
LMNA-225ENST00000515824 GLTPD2A6NH11 291 aa24.62■■□□□ 1.53
LMNA-225ENST00000515824 LAMB2P55268 1798 aa24.62■■□□□ 1.53
LMNA-225ENST00000515824 PTPRCP08575 1304 aa24.61■■□□□ 1.53
LMNA-225ENST00000515824 SNED1Q8TER0 1413 aa24.61■■□□□ 1.53
LMNA-225ENST00000515824 RPS8P62241 208 aaKnown RBP24.61■■□□□ 1.53
LMNA-225ENST00000515824 SLC4A10Q6U841 1118 aa24.61■■□□□ 1.53
LMNA-225ENST00000515824 MPNDQ8N594 471 aa24.61■■□□□ 1.53
LMNA-225ENST00000515824 CCDC88AQ3V6T2 1871 aa24.61■■□□□ 1.53
LMNA-225ENST00000515824 CTSWP56202 376 aa24.6■■□□□ 1.53
LMNA-225ENST00000515824 SUPT20HQ8NEM7 779 aa24.6■■□□□ 1.53
LMNA-225ENST00000515824 CCDC85AQ96PX6 553 aaPredicted RBP24.6■■□□□ 1.53
LMNA-225ENST00000515824 BCL2L13Q9BXK5 485 aa24.6■■□□□ 1.53
LMNA-225ENST00000515824 NMRK2Q9NPI5 230 aa24.6■■□□□ 1.53
LMNA-225ENST00000515824 SMC4Q9NTJ3 1288 aa24.6■■□□□ 1.53
LMNA-225ENST00000515824 DPP8Q6V1X1 898 aaPredicted RBP24.59■■□□□ 1.53
LMNA-225ENST00000515824 SLC51AQ86UW1 340 aa24.59■■□□□ 1.53
LMNA-225ENST00000515824 JDP2Q8WYK2 163 aa24.59■■□□□ 1.53
LMNA-225ENST00000515824 SEC31BQ9NQW1 1179 aa24.59■■□□□ 1.53
LMNA-225ENST00000515824 KIF3CO14782 793 aa24.58■■□□□ 1.53
LMNA-225ENST00000515824 ALDH1L1O75891 902 aa24.58■■□□□ 1.53
LMNA-225ENST00000515824 TTLL11Q8NHH1 800 aa24.58■■□□□ 1.53
LMNA-225ENST00000515824 PLA2G12BQ9BX93 195 aa24.58■■□□□ 1.53
LMNA-225ENST00000515824 SRCIN1Q9C0H9 1055 aa24.58■■□□□ 1.53
LMNA-225ENST00000515824 VPS33BQ9H267 617 aa24.58■■□□□ 1.53
LMNA-225ENST00000515824 RRAGCQ9HB90 399 aa24.58■■□□□ 1.53
LMNA-225ENST00000515824 CASP7P55210 303 aa24.57■■□□□ 1.52
LMNA-225ENST00000515824 C1QTNF8P60827 252 aa24.57■■□□□ 1.52
LMNA-225ENST00000515824 RTFDC1Q9BY42 306 aaPredicted RBP24.57■■□□□ 1.52
LMNA-225ENST00000515824 LARGE2Q8N3Y3 721 aa24.56■■□□□ 1.52
LMNA-225ENST00000515824 CDC5LQ99459 802 aaKnown RBP24.56■■□□□ 1.52
LMNA-225ENST00000515824 C9orf78Q9NZ63 289 aaPredicted RBP24.56■■□□□ 1.52
LMNA-225ENST00000515824 DICER1Q9UPY3 1922 aaKnown RBP24.55■■□□□ 1.52
LMNA-225ENST00000515824 PPIP5K2O43314 1243 aa24.55■■□□□ 1.52
LMNA-225ENST00000515824 ANKRD18AQ8IVF6 992 aa24.55■■□□□ 1.52
LMNA-225ENST00000515824 NSFL1CQ9UNZ2 370 aaKnown RBP24.55■■□□□ 1.52
LMNA-225ENST00000515824 GRM8O00222 908 aa24.54■■□□□ 1.52
LMNA-225ENST00000515824 C16orf71Q8IYS4 520 aaPredicted RBP24.54■■□□□ 1.52
LMNA-225ENST00000515824 GREM2Q9H772 168 aa24.54■■□□□ 1.52
LMNA-225ENST00000515824 TIAM2Q8IVF5 1701 aa24.53■■□□□ 1.52
LMNA-225ENST00000515824 FZD9O00144 591 aa24.53■■□□□ 1.52
LMNA-225ENST00000515824 VEGFAP15692 232 aaPredicted RBP24.53■■□□□ 1.52
LMNA-225ENST00000515824 BRPF1P55201 1214 aaPredicted RBP24.53■■□□□ 1.52
LMNA-225ENST00000515824 TAF1P21675 1872 aa24.52■■□□□ 1.52
LMNA-225ENST00000515824 TOMM70O94826 608 aa24.52■■□□□ 1.52
LMNA-225ENST00000515824 DDNO94850 711 aaPredicted RBP24.52■■□□□ 1.52
LMNA-225ENST00000515824 CSF1RP07333 972 aa24.52■■□□□ 1.52
LMNA-225ENST00000515824 RARSP54136 660 aaKnown RBP24.52■■□□□ 1.52
LMNA-225ENST00000515824 EIF6P56537 245 aaKnown RBP24.52■■□□□ 1.52
LMNA-225ENST00000515824 AOC3Q16853 763 aa24.52■■□□□ 1.52
LMNA-225ENST00000515824 NIM1KQ8IY84 436 aa24.52■■□□□ 1.52
LMNA-225ENST00000515824 RTL9Q8NET4 1388 aa24.52■■□□□ 1.52
LMNA-225ENST00000515824 ZBED9Q6R2W3 1325 aa24.51■■□□□ 1.51
LMNA-225ENST00000515824 GPSM2P81274 684 aa24.5■■□□□ 1.51
LMNA-225ENST00000515824 NOB1Q9ULX3 412 aaKnown RBP24.5■■□□□ 1.51
LMNA-225ENST00000515824 C6orf229H3BNL8 230 aa24.49■■□□□ 1.51
LMNA-225ENST00000515824 IGHMBP2P38935 993 aaKnown RBP24.49■■□□□ 1.51
LMNA-225ENST00000515824 KIAA2012Q0VF49 1180 aa24.49■■□□□ 1.51
LMNA-225ENST00000515824 BSDC1Q9NW68 430 aaPredicted RBP24.49■■□□□ 1.51
LMNA-225ENST00000515824 ANKIB1Q9P2G1 1089 aa24.49■■□□□ 1.51
LMNA-225ENST00000515824 ITGA6P23229 1130 aa24.48■■□□□ 1.51
LMNA-225ENST00000515824 FOXO4P98177 505 aa24.48■■□□□ 1.51
LMNA-225ENST00000515824 API5Q9BZZ5 524 aaKnown RBP24.48■■□□□ 1.51
LMNA-225ENST00000515824 ZNF541Q9H0D2 1346 aa24.48■■□□□ 1.51
LMNA-225ENST00000515824 PODXL2Q9NZ53 605 aa24.48■■□□□ 1.51
LMNA-225ENST00000515824 WASHC4Q2M389 1173 aa24.47■■□□□ 1.51
LMNA-225ENST00000515824 FAM161AQ3B820 660 aa24.47■■□□□ 1.51
LMNA-225ENST00000515824 EYA3Q99504 573 aa24.47■■□□□ 1.51
LMNA-225ENST00000515824 POLLQ9UGP5 575 aa24.47■■□□□ 1.51
LMNA-225ENST00000515824 CHMP3Q9Y3E7 222 aa24.47■■□□□ 1.51
LMNA-225ENST00000515824 COL4A1P02462 1669 aa24.46■■□□□ 1.51
LMNA-225ENST00000515824 ANKRD18BA2A2Z9 1011 aa24.46■■□□□ 1.51
LMNA-225ENST00000515824 GPC2Q8N158 579 aa24.46■■□□□ 1.51
LMNA-225ENST00000515824 TBC1D16Q8TBP0 767 aa24.46■■□□□ 1.51
LMNA-225ENST00000515824 GGA1Q9UJY5 639 aa24.46■■□□□ 1.51
LMNA-225ENST00000515824 ZNRF3Q9ULT6 936 aa24.46■■□□□ 1.51
LMNA-225ENST00000515824 UTYO14607 1347 aa24.45■■□□□ 1.5
LMNA-225ENST00000515824 KIF16BQ96L93 1317 aa24.45■■□□□ 1.5
LMNA-225ENST00000515824 IQCA1LA6NCM1 817 aa24.45■■□□□ 1.5
LMNA-225ENST00000515824 POTECB2RU33 542 aa24.45■■□□□ 1.5
LMNA-225ENST00000515824 NBPF7P0C2Y1 421 aaPredicted RBP24.45■■□□□ 1.5
LMNA-225ENST00000515824 IFIT5Q13325 482 aaKnown RBP24.45■■□□□ 1.5
LMNA-225ENST00000515824 LMBR1LQ6UX01 489 aa24.45■■□□□ 1.5
LMNA-225ENST00000515824 RBM46Q8TBY0 533 aaKnown RBP24.45■■□□□ 1.5
LMNA-225ENST00000515824 L3MBTL3Q96JM7 780 aaPredicted RBP24.45■■□□□ 1.5
LMNA-225ENST00000515824 MPHOSPH8Q99549 860 aa24.45■■□□□ 1.5
LMNA-225ENST00000515824 MYH3P11055 1940 aa24.45■■□□□ 1.5
LMNA-225ENST00000515824 LRRC37AA6NMS7 1700 aa24.44■■□□□ 1.5
LMNA-225ENST00000515824 XDHP47989 1333 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms