RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-234ENST00000515621 UTP14AQ9BVJ6 771 aaKnown RBP11.19□□□□□ -0.62
NR1I3-234ENST00000515621 NYXQ9GZU5 481 aa11.19□□□□□ -0.62
NR1I3-234ENST00000515621 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
NR1I3-234ENST00000515621 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
NR1I3-234ENST00000515621 TBC1D2BQ9UPU7 963 aa11.19□□□□□ -0.62
NR1I3-234ENST00000515621 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
NR1I3-234ENST00000515621 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
NR1I3-234ENST00000515621 LRP5O75197 1615 aa11.18□□□□□ -0.62
NR1I3-234ENST00000515621 ZPR1O75312 459 aa11.18□□□□□ -0.62
NR1I3-234ENST00000515621 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
NR1I3-234ENST00000515621 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
NR1I3-234ENST00000515621 LMBR1LQ6UX01 489 aa11.18□□□□□ -0.62
NR1I3-234ENST00000515621 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
NR1I3-234ENST00000515621 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
NR1I3-234ENST00000515621 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
NR1I3-234ENST00000515621 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 NTSR2O95665 410 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 CTSWP56202 376 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
NR1I3-234ENST00000515621 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
NR1I3-234ENST00000515621 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-234ENST00000515621 MX1P20591 662 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-234ENST00000515621 PDE1AP54750 535 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-234ENST00000515621 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 TTC22Q5TAA0 569 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 FAM89AQ96GI7 184 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 ARXQ96QS3 562 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
NR1I3-234ENST00000515621 ERC2O15083 957 aa11.15□□□□□ -0.62
NR1I3-234ENST00000515621 APBA3O96018 575 aa11.15□□□□□ -0.62
NR1I3-234ENST00000515621 GPTP24298 496 aa11.15□□□□□ -0.62
NR1I3-234ENST00000515621 RFC4P35249 363 aa11.15□□□□□ -0.62
NR1I3-234ENST00000515621 MNX1P50219 401 aaPredicted RBP11.15□□□□□ -0.62
NR1I3-234ENST00000515621 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
NR1I3-234ENST00000515621 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
NR1I3-234ENST00000515621 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
NR1I3-234ENST00000515621 MYH3P11055 1940 aa11.14□□□□□ -0.63
NR1I3-234ENST00000515621 EYA2O00167 538 aa11.14□□□□□ -0.63
NR1I3-234ENST00000515621 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
NR1I3-234ENST00000515621 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
NR1I3-234ENST00000515621 SUSD4Q5VX71 490 aa11.14□□□□□ -0.63
NR1I3-234ENST00000515621 SETDB2Q96T68 719 aa11.14□□□□□ -0.63
NR1I3-234ENST00000515621 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
NR1I3-234ENST00000515621 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
NR1I3-234ENST00000515621 QSER1Q2KHR3 1735 aa11.13□□□□□ -0.63
NR1I3-234ENST00000515621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
NR1I3-234ENST00000515621 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
NR1I3-234ENST00000515621 GLRX3O76003 335 aaKnown RBP11.13□□□□□ -0.63
NR1I3-234ENST00000515621 SASH1O94885 1247 aa11.13□□□□□ -0.63
NR1I3-234ENST00000515621 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
NR1I3-234ENST00000515621 USPL1Q5W0Q7 1092 aa11.13□□□□□ -0.63
NR1I3-234ENST00000515621 TPTE2Q6XPS3 522 aa11.13□□□□□ -0.63
NR1I3-234ENST00000515621 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
NR1I3-234ENST00000515621 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
NR1I3-234ENST00000515621 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
NR1I3-234ENST00000515621 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
NR1I3-234ENST00000515621 STK25O00506 426 aa11.12□□□□□ -0.63
NR1I3-234ENST00000515621 CDC45O75419 566 aa11.12□□□□□ -0.63
NR1I3-234ENST00000515621 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
NR1I3-234ENST00000515621 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
NR1I3-234ENST00000515621 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
NR1I3-234ENST00000515621 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
NR1I3-234ENST00000515621 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
NR1I3-234ENST00000515621 ZNF609O15014 1411 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 APBB1O00213 710 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
NR1I3-234ENST00000515621 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-234ENST00000515621 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
NR1I3-234ENST00000515621 ITGA6P23229 1130 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 KCNQ4P56696 695 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 TBC1D9BQ66K14 1250 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
NR1I3-234ENST00000515621 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
NR1I3-234ENST00000515621 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
NR1I3-234ENST00000515621 MROH5Q6ZUA9 1318 aa11.1□□□□□ -0.63
NR1I3-234ENST00000515621 TUBGCP6Q96RT7 1819 aa11.1□□□□□ -0.63
NR1I3-234ENST00000515621 GYS1P13807 737 aa11.1□□□□□ -0.63
NR1I3-234ENST00000515621 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
NR1I3-234ENST00000515621 NBPF5PQ86XG9 351 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-234ENST00000515621 C16orf71Q8IYS4 520 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-234ENST00000515621 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
NR1I3-234ENST00000515621 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
NR1I3-234ENST00000515621 CAMKK2Q96RR4 588 aa11.1□□□□□ -0.63
NR1I3-234ENST00000515621 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
NR1I3-234ENST00000515621 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms