RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-233ENST00000515339 HACL1Q9UJ83 578 aa28.44■■■□□ 2.14
PACRGL-233ENST00000515339 GJA3Q9Y6H8 435 aa28.44■■■□□ 2.14
PACRGL-233ENST00000515339 LRRC37AA6NMS7 1700 aa28.43■■■□□ 2.14
PACRGL-233ENST00000515339 DDX58O95786 925 aaKnown RBP28.43■■■□□ 2.14
PACRGL-233ENST00000515339 SF3B3Q15393 1217 aaKnown RBP28.43■■■□□ 2.14
PACRGL-233ENST00000515339 DPP8Q6V1X1 898 aaPredicted RBP28.43■■■□□ 2.14
PACRGL-233ENST00000515339 NIM1KQ8IY84 436 aa28.42■■■□□ 2.14
PACRGL-233ENST00000515339 MPNDQ8N594 471 aa28.42■■■□□ 2.14
PACRGL-233ENST00000515339 STK31Q9BXU1 1019 aa28.42■■■□□ 2.14
PACRGL-233ENST00000515339 RTFDC1Q9BY42 306 aaPredicted RBP28.42■■■□□ 2.14
PACRGL-233ENST00000515339 EAPPQ56P03 285 aaPredicted RBP28.41■■■□□ 2.14
PACRGL-233ENST00000515339 FAM9BQ8IZU0 186 aa28.41■■■□□ 2.14
PACRGL-233ENST00000515339 ZBTB38Q8NAP3 1195 aaPredicted RBP28.41■■■□□ 2.14
PACRGL-233ENST00000515339 SUPT20HQ8NEM7 779 aa28.41■■■□□ 2.14
PACRGL-233ENST00000515339 CELF1Q92879 486 aaKnown RBP28.41■■■□□ 2.14
PACRGL-233ENST00000515339 KLRG1Q96E93 195 aa28.41■■■□□ 2.14
PACRGL-233ENST00000515339 METTL22Q9BUU2 404 aaPredicted RBP28.41■■■□□ 2.14
PACRGL-233ENST00000515339 MAP3K2Q9Y2U5 619 aa28.41■■■□□ 2.14
PACRGL-233ENST00000515339 DUOX1Q9NRD9 1551 aa28.41■■■□□ 2.14
PACRGL-233ENST00000515339 FANCIQ9NVI1 1328 aa28.41■■■□□ 2.14
PACRGL-233ENST00000515339 EPHX2P34913 555 aa28.4■■■□□ 2.14
PACRGL-233ENST00000515339 LDHDQ86WU2 507 aa28.4■■■□□ 2.14
PACRGL-233ENST00000515339 CCDC191Q8NCU4 936 aa28.4■■■□□ 2.14
PACRGL-233ENST00000515339 JARID2Q92833 1246 aaPredicted RBP28.4■■■□□ 2.14
PACRGL-233ENST00000515339 LTBP1Q14766 1721 aa28.4■■■□□ 2.14
PACRGL-233ENST00000515339 CWC25Q9NXE8 425 aaPredicted RBP28.39■■■□□ 2.14
PACRGL-233ENST00000515339 ADAMTSL1Q8N6G6 1762 aa28.39■■■□□ 2.13
PACRGL-233ENST00000515339 PI4KAP2A4QPH2 592 aa28.38■■■□□ 2.13
PACRGL-233ENST00000515339 G2E3Q7L622 706 aa28.38■■■□□ 2.13
PACRGL-233ENST00000515339 TMC4Q7Z404 712 aa28.38■■■□□ 2.13
PACRGL-233ENST00000515339 PI4KAP1Q8N8J0 262 aa28.38■■■□□ 2.13
PACRGL-233ENST00000515339 VPS33BQ9H267 617 aa28.38■■■□□ 2.13
PACRGL-233ENST00000515339 PCCAP05165 728 aaPredicted RBP28.37■■■□□ 2.13
PACRGL-233ENST00000515339 KSR2Q6VAB6 950 aa28.37■■■□□ 2.13
PACRGL-233ENST00000515339 WDR63Q8IWG1 891 aa28.37■■■□□ 2.13
PACRGL-233ENST00000515339 SLC4A2P04920 1241 aa28.36■■■□□ 2.13
PACRGL-233ENST00000515339 CLEC11AQ9Y240 323 aa28.36■■■□□ 2.13
PACRGL-233ENST00000515339 KIAA2012Q0VF49 1180 aa28.35■■■□□ 2.13
PACRGL-233ENST00000515339 ZNRF3Q9ULT6 936 aa28.35■■■□□ 2.13
PACRGL-233ENST00000515339 IGKV5-2P06315 115 aa28.34■■■□□ 2.13
PACRGL-233ENST00000515339 SCNN1DP51172 638 aa28.34■■■□□ 2.13
PACRGL-233ENST00000515339 PNMA8AQ86V59 439 aaPredicted RBP28.34■■■□□ 2.13
PACRGL-233ENST00000515339 SEC31BQ9NQW1 1179 aa28.34■■■□□ 2.13
PACRGL-233ENST00000515339 HSP90B1P14625 803 aaKnown RBP28.33■■■□□ 2.13
PACRGL-233ENST00000515339 LMOD1P29536 600 aaPredicted RBP28.33■■■□□ 2.13
PACRGL-233ENST00000515339 SPINK5Q9NQ38 1064 aaPredicted RBP28.33■■■□□ 2.13
PACRGL-233ENST00000515339 PDE8AO60658 829 aa28.32■■■□□ 2.12
PACRGL-233ENST00000515339 EPS15P42566 896 aa28.32■■■□□ 2.12
PACRGL-233ENST00000515339 RPS8P62241 208 aaKnown RBP28.32■■■□□ 2.12
PACRGL-233ENST00000515339 EXOSC9Q06265 439 aaKnown RBP28.32■■■□□ 2.12
PACRGL-233ENST00000515339 CXCL9Q07325 125 aa28.32■■■□□ 2.12
PACRGL-233ENST00000515339 CCDC85AQ96PX6 553 aaPredicted RBP28.32■■■□□ 2.12
PACRGL-233ENST00000515339 NSFL1CQ9UNZ2 370 aaKnown RBP28.32■■■□□ 2.12
PACRGL-233ENST00000515339 PCNTO95613 3336 aa28.31■■■□□ 2.12
PACRGL-233ENST00000515339 GPSM2P81274 684 aa28.31■■■□□ 2.12
PACRGL-233ENST00000515339 CWF19L2Q2TBE0 894 aaKnown RBP28.31■■■□□ 2.12
PACRGL-233ENST00000515339 PASKQ96RG2 1323 aa28.31■■■□□ 2.12
PACRGL-233ENST00000515339 CACNA1FO60840 1977 aa28.31■■■□□ 2.12
PACRGL-233ENST00000515339 NEXNQ0ZGT2 675 aa28.3■■■□□ 2.12
PACRGL-233ENST00000515339 CCDC152Q4G0S7 254 aa28.3■■■□□ 2.12
PACRGL-233ENST00000515339 JMYQ8N9B5 988 aa28.3■■■□□ 2.12
PACRGL-233ENST00000515339 CDHR2Q9BYE9 1310 aa28.29■■■□□ 2.12
PACRGL-233ENST00000515339 VAMP4O75379 141 aa28.29■■■□□ 2.12
PACRGL-233ENST00000515339 ITGBL1O95965 494 aaPredicted RBP28.29■■■□□ 2.12
PACRGL-233ENST00000515339 FLIIQ13045 1269 aa28.29■■■□□ 2.12
PACRGL-233ENST00000515339 MAP1SQ66K74 1059 aaPredicted RBP28.29■■■□□ 2.12
PACRGL-233ENST00000515339 MYH3P11055 1940 aa28.28■■■□□ 2.12
PACRGL-233ENST00000515339 NEURL1BA8MQ27 555 aa28.28■■■□□ 2.12
PACRGL-233ENST00000515339 RAD17O75943 681 aa28.28■■■□□ 2.12
PACRGL-233ENST00000515339 CREBZFQ9NS37 354 aa28.28■■■□□ 2.12
PACRGL-233ENST00000515339 POLLQ9UGP5 575 aa28.28■■■□□ 2.12
PACRGL-233ENST00000515339 YDJCA8MPS7 323 aa28.27■■■□□ 2.12
PACRGL-233ENST00000515339 C6orf229H3BNL8 230 aa28.27■■■□□ 2.12
PACRGL-233ENST00000515339 WASHC4Q2M389 1173 aa28.27■■■□□ 2.12
PACRGL-233ENST00000515339 CIAPIN1Q6FI81 312 aa28.27■■■□□ 2.12
PACRGL-233ENST00000515339 GPR101Q96P66 508 aaPredicted RBP28.27■■■□□ 2.12
PACRGL-233ENST00000515339 RIMBP2O15034 1052 aa28.26■■■□□ 2.11
PACRGL-233ENST00000515339 GMPSP49915 693 aaPredicted RBP28.26■■■□□ 2.11
PACRGL-233ENST00000515339 FKBP5Q13451 457 aaPredicted RBP28.26■■■□□ 2.11
PACRGL-233ENST00000515339 CNTROBQ8N137 903 aa28.26■■■□□ 2.11
PACRGL-233ENST00000515339 GPRC5DQ9NZD1 345 aa28.26■■■□□ 2.11
PACRGL-233ENST00000515339 CTSWP56202 376 aa28.25■■■□□ 2.11
PACRGL-233ENST00000515339 SPEF2Q9C093 1822 aa28.25■■■□□ 2.11
PACRGL-233ENST00000515339 TBC1D16Q8TBP0 767 aa28.24■■■□□ 2.11
PACRGL-233ENST00000515339 MYH16Q9H6N6 1097 aa28.24■■■□□ 2.11
PACRGL-233ENST00000515339 DBNDD1Q9H9R9 158 aa28.24■■■□□ 2.11
PACRGL-233ENST00000515339 TNIP1Q15025 636 aa28.23■■■□□ 2.11
PACRGL-233ENST00000515339 UBE3BQ7Z3V4 1068 aa28.23■■■□□ 2.11
PACRGL-233ENST00000515339 MKRN1Q9UHC7 482 aaKnown RBP28.23■■■□□ 2.11
PACRGL-233ENST00000515339 USP50Q70EL3 339 aaPredicted RBP28.22■■■□□ 2.11
PACRGL-233ENST00000515339 DNAAF4Q8WXU2 420 aa28.22■■■□□ 2.11
PACRGL-233ENST00000515339 BCL2L13Q9BXK5 485 aa28.22■■■□□ 2.11
PACRGL-233ENST00000515339 ANKIB1Q9P2G1 1089 aa28.22■■■□□ 2.11
PACRGL-233ENST00000515339 DOK7Q18PE1 504 aa28.21■■■□□ 2.11
PACRGL-233ENST00000515339 ANKRD18AQ8IVF6 992 aa28.21■■■□□ 2.11
PACRGL-233ENST00000515339 TTLL11Q8NHH1 800 aa28.21■■■□□ 2.11
PACRGL-233ENST00000515339 EYA3Q99504 573 aa28.21■■■□□ 2.11
PACRGL-233ENST00000515339 ADARB2Q9NS39 739 aaKnown RBP28.21■■■□□ 2.11
PACRGL-233ENST00000515339 PODXL2Q9NZ53 605 aa28.21■■■□□ 2.11
PACRGL-233ENST00000515339 H7C1W4 665 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms