RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 GRAPQ13588 217 aa17.82■□□□□ 0.44
ITGA3-214ENST00000514834 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
ITGA3-214ENST00000514834 CCDC191Q8NCU4 936 aa17.82■□□□□ 0.44
ITGA3-214ENST00000514834 GRAPLQ8TC17 118 aaPredicted RBP17.82■□□□□ 0.44
ITGA3-214ENST00000514834 CHMP4AQ9BY43 222 aa17.82■□□□□ 0.44
ITGA3-214ENST00000514834 CWC25Q9NXE8 425 aaPredicted RBP17.82■□□□□ 0.44
ITGA3-214ENST00000514834 FZD9O00144 591 aa17.81■□□□□ 0.44
ITGA3-214ENST00000514834 PCCAP05165 728 aaPredicted RBP17.81■□□□□ 0.44
ITGA3-214ENST00000514834 FLIIQ13045 1269 aa17.81■□□□□ 0.44
ITGA3-214ENST00000514834 SP8Q8IXZ3 490 aa17.81■□□□□ 0.44
ITGA3-214ENST00000514834 POTEIP0CG38 1075 aa17.8■□□□□ 0.44
ITGA3-214ENST00000514834 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
ITGA3-214ENST00000514834 SEC31BQ9NQW1 1179 aa17.8■□□□□ 0.44
ITGA3-214ENST00000514834 AOC3Q16853 763 aa17.79■□□□□ 0.44
ITGA3-214ENST00000514834 CCDC85AQ96PX6 553 aaPredicted RBP17.79■□□□□ 0.44
ITGA3-214ENST00000514834 MYH16Q9H6N6 1097 aa17.79■□□□□ 0.44
ITGA3-214ENST00000514834 CACNA1FO60840 1977 aa17.79■□□□□ 0.44
ITGA3-214ENST00000514834 LRRC37AA6NMS7 1700 aa17.78■□□□□ 0.44
ITGA3-214ENST00000514834 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
ITGA3-214ENST00000514834 HTRA3P83110 453 aa17.78■□□□□ 0.44
ITGA3-214ENST00000514834 LARGE2Q8N3Y3 721 aa17.78■□□□□ 0.44
ITGA3-214ENST00000514834 MPNDQ8N594 471 aa17.78■□□□□ 0.44
ITGA3-214ENST00000514834 RTFDC1Q9BY42 306 aaPredicted RBP17.78■□□□□ 0.44
ITGA3-214ENST00000514834 DUOX1Q9NRD9 1551 aa17.78■□□□□ 0.44
ITGA3-214ENST00000514834 F6X3S4 739 aa17.77■□□□□ 0.44
ITGA3-214ENST00000514834 FKBP5Q13451 457 aaPredicted RBP17.77■□□□□ 0.44
ITGA3-214ENST00000514834 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.44
ITGA3-214ENST00000514834 DPP8Q6V1X1 898 aaPredicted RBP17.77■□□□□ 0.44
ITGA3-214ENST00000514834 JDP2Q8WYK2 163 aa17.77■□□□□ 0.44
ITGA3-214ENST00000514834 L3MBTL3Q96JM7 780 aaPredicted RBP17.77■□□□□ 0.44
ITGA3-214ENST00000514834 PPIP5K2O43314 1243 aa17.76■□□□□ 0.43
ITGA3-214ENST00000514834 PDE8AO60658 829 aa17.76■□□□□ 0.43
ITGA3-214ENST00000514834 FSTL1Q12841 308 aa17.76■□□□□ 0.43
ITGA3-214ENST00000514834 CDCA7LQ96GN5 454 aa17.76■□□□□ 0.43
ITGA3-214ENST00000514834 H7C1W4 665 aa17.75■□□□□ 0.43
ITGA3-214ENST00000514834 RPS8P62241 208 aaKnown RBP17.75■□□□□ 0.43
ITGA3-214ENST00000514834 GPSM2P81274 684 aa17.75■□□□□ 0.43
ITGA3-214ENST00000514834 NEXNQ0ZGT2 675 aa17.75■□□□□ 0.43
ITGA3-214ENST00000514834 UBE3BQ7Z3V4 1068 aa17.75■□□□□ 0.43
ITGA3-214ENST00000514834 SMC1BQ8NDV3 1235 aa17.75■□□□□ 0.43
ITGA3-214ENST00000514834 DNAAF4Q8WXU2 420 aa17.75■□□□□ 0.43
ITGA3-214ENST00000514834 TMX4Q9H1E5 349 aaPredicted RBP17.75■□□□□ 0.43
ITGA3-214ENST00000514834 TAF1DQ9H5J8 278 aaPredicted RBP17.75■□□□□ 0.43
ITGA3-214ENST00000514834 GJA3Q9Y6H8 435 aa17.75■□□□□ 0.43
ITGA3-214ENST00000514834 CDHR2Q9BYE9 1310 aa17.74■□□□□ 0.43
ITGA3-214ENST00000514834 GCKRQ14397 625 aa17.74■□□□□ 0.43
ITGA3-214ENST00000514834 GPR101Q96P66 508 aaPredicted RBP17.74■□□□□ 0.43
ITGA3-214ENST00000514834 LTBP1Q14766 1721 aa17.74■□□□□ 0.43
ITGA3-214ENST00000514834 SCN4AP35499 1836 aa17.74■□□□□ 0.43
ITGA3-214ENST00000514834 CASP7P55210 303 aa17.73■□□□□ 0.43
ITGA3-214ENST00000514834 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
ITGA3-214ENST00000514834 NIM1KQ8IY84 436 aa17.73■□□□□ 0.43
ITGA3-214ENST00000514834 GPC2Q8N158 579 aa17.73■□□□□ 0.43
ITGA3-214ENST00000514834 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
ITGA3-214ENST00000514834 POLLQ9UGP5 575 aa17.73■□□□□ 0.43
ITGA3-214ENST00000514834 NSFL1CQ9UNZ2 370 aaKnown RBP17.73■□□□□ 0.43
ITGA3-214ENST00000514834 MYH3P11055 1940 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 APLP1P51693 650 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 CTSWP56202 376 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 EIF6P56537 245 aaKnown RBP17.72■□□□□ 0.43
ITGA3-214ENST00000514834 CXCL9Q07325 125 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 KIAA2012Q0VF49 1180 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 CCDC152Q4G0S7 254 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 TMC4Q7Z404 712 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 DNAJC5GQ8N7S2 189 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 SUPT20HQ8NEM7 779 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 LINS1Q8NG48 757 aa17.72■□□□□ 0.43
ITGA3-214ENST00000514834 WTIPA6NIX2 430 aaPredicted RBP17.71■□□□□ 0.43
ITGA3-214ENST00000514834 YDJCA8MPS7 323 aa17.71■□□□□ 0.43
ITGA3-214ENST00000514834 BEND3Q5T5X7 828 aa17.71■□□□□ 0.43
ITGA3-214ENST00000514834 GREM2Q9H772 168 aa17.71■□□□□ 0.43
ITGA3-214ENST00000514834 HACL1Q9UJ83 578 aa17.71■□□□□ 0.43
ITGA3-214ENST00000514834 ZNRF3Q9ULT6 936 aa17.71■□□□□ 0.43
ITGA3-214ENST00000514834 SPEF2Q9C093 1822 aa17.7■□□□□ 0.42
ITGA3-214ENST00000514834 IQCA1LA6NCM1 817 aa17.7■□□□□ 0.42
ITGA3-214ENST00000514834 E9PSI1 815 aa17.7■□□□□ 0.42
ITGA3-214ENST00000514834 RIMBP2O15034 1052 aa17.7■□□□□ 0.42
ITGA3-214ENST00000514834 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
ITGA3-214ENST00000514834 EPHX2P34913 555 aa17.7■□□□□ 0.42
ITGA3-214ENST00000514834 SCNN1DP51172 638 aa17.7■□□□□ 0.42
ITGA3-214ENST00000514834 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
ITGA3-214ENST00000514834 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
ITGA3-214ENST00000514834 RAD17O75943 681 aa17.69■□□□□ 0.42
ITGA3-214ENST00000514834 EPS15P42566 896 aa17.69■□□□□ 0.42
ITGA3-214ENST00000514834 EAPPQ56P03 285 aaPredicted RBP17.69■□□□□ 0.42
ITGA3-214ENST00000514834 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
ITGA3-214ENST00000514834 MRPL50Q8N5N7 158 aaKnown RBP17.69■□□□□ 0.42
ITGA3-214ENST00000514834 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
ITGA3-214ENST00000514834 KCNQ5Q9NR82 932 aa17.69■□□□□ 0.42
ITGA3-214ENST00000514834 ADAMTSL1Q8N6G6 1762 aa17.68■□□□□ 0.42
ITGA3-214ENST00000514834 DOK7Q18PE1 504 aa17.68■□□□□ 0.42
ITGA3-214ENST00000514834 WASHC4Q2M389 1173 aa17.68■□□□□ 0.42
ITGA3-214ENST00000514834 TRMT2AQ8IZ69 625 aaKnown RBP17.68■□□□□ 0.42
ITGA3-214ENST00000514834 DBNDD1Q9H9R9 158 aa17.68■□□□□ 0.42
ITGA3-214ENST00000514834 ANKRD18AQ8IVF6 992 aa17.67■□□□□ 0.42
ITGA3-214ENST00000514834 SSH1Q8WYL5 1049 aa17.67■□□□□ 0.42
ITGA3-214ENST00000514834 PLA2G12BQ9BX93 195 aa17.67■□□□□ 0.42
ITGA3-214ENST00000514834 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
ITGA3-214ENST00000514834 SHTN1A0MZ66 631 aa17.66■□□□□ 0.42
ITGA3-214ENST00000514834 CSF1RP07333 972 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms