RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 ROCK2O75116 1388 aaKnown RBP10.67□□□□□ -0.7
CLDND1-229ENST00000513988 KLRG2A4D1S0 409 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-229ENST00000513988 ADM5C9JUS6 153 aa10.67□□□□□ -0.7
CLDND1-229ENST00000513988 H7C1D1 291 aa10.67□□□□□ -0.7
CLDND1-229ENST00000513988 FYB1O15117 783 aa10.67□□□□□ -0.7
CLDND1-229ENST00000513988 PPIP5K2O43314 1243 aa10.67□□□□□ -0.7
CLDND1-229ENST00000513988 PLEKHO1Q53GL0 409 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-229ENST00000513988 Q7L0L9 218 aa10.67□□□□□ -0.7
CLDND1-229ENST00000513988 NBPF5PQ86XG9 351 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-229ENST00000513988 DCPSQ96C86 337 aaKnown RBP10.67□□□□□ -0.7
CLDND1-229ENST00000513988 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
CLDND1-229ENST00000513988 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-229ENST00000513988 LAMB4A4D0S4 1761 aa10.67□□□□□ -0.7
CLDND1-229ENST00000513988 TM4SF4P48230 202 aa10.66□□□□□ -0.7
CLDND1-229ENST00000513988 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
CLDND1-229ENST00000513988 C1orf141Q5JVX7 400 aa10.66□□□□□ -0.7
CLDND1-229ENST00000513988 CFHR5Q9BXR6 569 aa10.66□□□□□ -0.7
CLDND1-229ENST00000513988 R3HDMLQ9H3Y0 253 aa10.66□□□□□ -0.7
CLDND1-229ENST00000513988 MTMR10Q9NXD2 777 aa10.66□□□□□ -0.7
CLDND1-229ENST00000513988 CNOT7Q9UIV1 285 aaKnown RBP10.66□□□□□ -0.7
CLDND1-229ENST00000513988 MRC1P22897 1456 aa10.66□□□□□ -0.7
CLDND1-229ENST00000513988 POLR2AP24928 1970 aaKnown RBP10.65□□□□□ -0.7
CLDND1-229ENST00000513988 ZNF333Q96JL9 665 aa10.65□□□□□ -0.7
CLDND1-229ENST00000513988 ZNRF3Q9ULT6 936 aa10.65□□□□□ -0.7
CLDND1-229ENST00000513988 NR2E3Q9Y5X4 410 aa10.65□□□□□ -0.7
CLDND1-229ENST00000513988 STARD3NLO95772 234 aa10.64□□□□□ -0.71
CLDND1-229ENST00000513988 SREBF2Q12772 1141 aa10.64□□□□□ -0.71
CLDND1-229ENST00000513988 TNIP1Q15025 636 aa10.64□□□□□ -0.71
CLDND1-229ENST00000513988 AOC3Q16853 763 aa10.64□□□□□ -0.71
CLDND1-229ENST00000513988 NPM2Q86SE8 214 aaKnown RBP10.64□□□□□ -0.71
CLDND1-229ENST00000513988 MICALL2Q8IY33 904 aa10.64□□□□□ -0.71
CLDND1-229ENST00000513988 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
CLDND1-229ENST00000513988 SHTN1A0MZ66 631 aa10.63□□□□□ -0.71
CLDND1-229ENST00000513988 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
CLDND1-229ENST00000513988 NBPF11Q86T75 865 aa10.63□□□□□ -0.71
CLDND1-229ENST00000513988 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
CLDND1-229ENST00000513988 ERO1AQ96HE7 468 aa10.63□□□□□ -0.71
CLDND1-229ENST00000513988 SNX27Q96L92 541 aa10.63□□□□□ -0.71
CLDND1-229ENST00000513988 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
CLDND1-229ENST00000513988 WTIPA6NIX2 430 aaPredicted RBP10.62□□□□□ -0.71
CLDND1-229ENST00000513988 RAD17O75943 681 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 CAMTA2O94983 1202 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 FKBP1BP68106 108 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 TBC1D10BQ4KMP7 808 aaPredicted RBP10.62□□□□□ -0.71
CLDND1-229ENST00000513988 SAMD7Q7Z3H4 446 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 VSIG10Q8N0Z9 540 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 CDCA5Q96FF9 252 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 HTATIP2Q9BUP3 242 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 EFCC1Q9HA90 598 aa10.62□□□□□ -0.71
CLDND1-229ENST00000513988 ZBTB7BO15156 539 aaPredicted RBP10.61□□□□□ -0.71
CLDND1-229ENST00000513988 ALDH1A1P00352 501 aa10.61□□□□□ -0.71
CLDND1-229ENST00000513988 MYCP01106 439 aaPredicted RBP10.61□□□□□ -0.71
CLDND1-229ENST00000513988 MKRN3Q13064 507 aaKnown RBP10.61□□□□□ -0.71
CLDND1-229ENST00000513988 SLC9C1Q4G0N8 1177 aa10.61□□□□□ -0.71
CLDND1-229ENST00000513988 TPTE2Q6XPS3 522 aa10.61□□□□□ -0.71
CLDND1-229ENST00000513988 VPS33BQ9H267 617 aa10.61□□□□□ -0.71
CLDND1-229ENST00000513988 ZNF609O15014 1411 aa10.6□□□□□ -0.71
CLDND1-229ENST00000513988 NUBP1P53384 320 aa10.6□□□□□ -0.71
CLDND1-229ENST00000513988 CD99L2Q8TCZ2 262 aa10.6□□□□□ -0.71
CLDND1-229ENST00000513988 KIF12Q96FN5 646 aa10.6□□□□□ -0.71
CLDND1-229ENST00000513988 SLC52A2Q9HAB3 445 aa10.6□□□□□ -0.71
CLDND1-229ENST00000513988 RPTORQ8N122 1335 aa10.59□□□□□ -0.71
CLDND1-229ENST00000513988 PIEZO1Q92508 2521 aa10.59□□□□□ -0.71
CLDND1-229ENST00000513988 TMEM265A0A087WTH1 108 aa10.59□□□□□ -0.71
CLDND1-229ENST00000513988 TCERG1O14776 1098 aaKnown RBP10.59□□□□□ -0.71
CLDND1-229ENST00000513988 IL6STP40189 918 aaPredicted RBP10.59□□□□□ -0.71
CLDND1-229ENST00000513988 RBM26Q5T8P6 1007 aaKnown RBP10.59□□□□□ -0.71
CLDND1-229ENST00000513988 SYMPKQ92797 1274 aaKnown RBP10.59□□□□□ -0.71
CLDND1-229ENST00000513988 STAP2Q9UGK3 403 aa10.59□□□□□ -0.71
CLDND1-229ENST00000513988 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
CLDND1-229ENST00000513988 PRAMEF22A3QJZ6 481 aa10.58□□□□□ -0.72
CLDND1-229ENST00000513988 FAM177BA6PVY3 158 aa10.58□□□□□ -0.72
CLDND1-229ENST00000513988 UBE2Q2LH0YL09 131 aa10.58□□□□□ -0.72
CLDND1-229ENST00000513988 TMX4Q9H1E5 349 aaPredicted RBP10.58□□□□□ -0.72
CLDND1-229ENST00000513988 GGA3Q9NZ52 723 aa10.58□□□□□ -0.72
CLDND1-229ENST00000513988 TRPC6Q9Y210 931 aa10.58□□□□□ -0.72
CLDND1-229ENST00000513988 MUC3AQ02505 3323 aa10.57□□□□□ -0.72
CLDND1-229ENST00000513988 PPEF1O14829 653 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-229ENST00000513988 MAP3K13O43283 966 aa10.57□□□□□ -0.72
CLDND1-229ENST00000513988 EGFRP00533 1210 aa10.57□□□□□ -0.72
CLDND1-229ENST00000513988 GTF2E1P29083 439 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-229ENST00000513988 EIF4A2Q14240 407 aaKnown RBP10.57□□□□□ -0.72
CLDND1-229ENST00000513988 MOB2Q70IA6 237 aa10.57□□□□□ -0.72
CLDND1-229ENST00000513988 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
CLDND1-229ENST00000513988 SUPT20HQ8NEM7 779 aa10.57□□□□□ -0.72
CLDND1-229ENST00000513988 DPF2Q92785 391 aa10.57□□□□□ -0.72
CLDND1-229ENST00000513988 RPGRQ92834 1020 aaKnown RBP10.57□□□□□ -0.72
CLDND1-229ENST00000513988 ZNF652Q9Y2D9 606 aa10.57□□□□□ -0.72
CLDND1-229ENST00000513988 PRUNE2Q8WUY3 3088 aa10.56□□□□□ -0.72
CLDND1-229ENST00000513988 CRY2Q49AN0 593 aa10.56□□□□□ -0.72
CLDND1-229ENST00000513988 SLC51AQ86UW1 340 aa10.56□□□□□ -0.72
CLDND1-229ENST00000513988 LAMA2P24043 3122 aaKnown RBP10.56□□□□□ -0.72
CLDND1-229ENST00000513988 EYSQ5T1H1 3165 aa10.55□□□□□ -0.72
CLDND1-229ENST00000513988 TNFRSF10AO00220 468 aa10.55□□□□□ -0.72
CLDND1-229ENST00000513988 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
CLDND1-229ENST00000513988 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
CLDND1-229ENST00000513988 TTLL12Q14166 644 aaPredicted RBP10.55□□□□□ -0.72
CLDND1-229ENST00000513988 CLEC4GQ6UXB4 293 aa10.55□□□□□ -0.72
CLDND1-229ENST00000513988 NIP7Q9Y221 180 aaKnown RBP eCLIP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms