RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 IRS4O14654 1257 aaPredicted RBP9.39□□□□□ -0.91
HTT-212ENST00000513639 PPIP5K2O43314 1243 aa9.39□□□□□ -0.91
HTT-212ENST00000513639 EPHX2P34913 555 aa9.39□□□□□ -0.91
HTT-212ENST00000513639 JMYQ8N9B5 988 aa9.39□□□□□ -0.91
HTT-212ENST00000513639 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
HTT-212ENST00000513639 GJA3Q9Y6H8 435 aa9.39□□□□□ -0.91
HTT-212ENST00000513639 FER1L6Q2WGJ9 1857 aa9.38□□□□□ -0.91
HTT-212ENST00000513639 NUP98P52948 1817 aa9.38□□□□□ -0.91
HTT-212ENST00000513639 RPS8P62241 208 aaKnown RBP9.38□□□□□ -0.91
HTT-212ENST00000513639 NEXNQ0ZGT2 675 aa9.38□□□□□ -0.91
HTT-212ENST00000513639 TNIP1Q15025 636 aa9.38□□□□□ -0.91
HTT-212ENST00000513639 EAPPQ56P03 285 aaPredicted RBP9.38□□□□□ -0.91
HTT-212ENST00000513639 KSR2Q6VAB6 950 aa9.38□□□□□ -0.91
HTT-212ENST00000513639 WDR63Q8IWG1 891 aa9.38□□□□□ -0.91
HTT-212ENST00000513639 METTL22Q9BUU2 404 aaPredicted RBP9.38□□□□□ -0.91
HTT-212ENST00000513639 PHAXQ9H814 394 aaKnown RBP9.38□□□□□ -0.91
HTT-212ENST00000513639 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
HTT-212ENST00000513639 CWC25Q9NXE8 425 aaPredicted RBP9.38□□□□□ -0.91
HTT-212ENST00000513639 LAMB4A4D0S4 1761 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 HTRA3P83110 453 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 KIAA2012Q0VF49 1180 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 WASHC4Q2M389 1173 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 CCDC152Q4G0S7 254 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 CCDC184Q52MB2 194 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 USP50Q70EL3 339 aaPredicted RBP9.37□□□□□ -0.91
HTT-212ENST00000513639 CNTROBQ8N137 903 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 MYD88Q99836 296 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 RNF39Q9H2S5 420 aa9.37□□□□□ -0.91
HTT-212ENST00000513639 NSFL1CQ9UNZ2 370 aaKnown RBP9.37□□□□□ -0.91
HTT-212ENST00000513639 TNRC6CQ9HCJ0 1690 aaKnown RBP9.36□□□□□ -0.91
HTT-212ENST00000513639 PI4KAP2A4QPH2 592 aa9.36□□□□□ -0.91
HTT-212ENST00000513639 PCCAP05165 728 aaPredicted RBP9.36□□□□□ -0.91
HTT-212ENST00000513639 AOC3Q16853 763 aa9.36□□□□□ -0.91
HTT-212ENST00000513639 TWISTNBQ3B726 338 aaPredicted RBP9.36□□□□□ -0.91
HTT-212ENST00000513639 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
HTT-212ENST00000513639 TSPYL6Q8N831 410 aa9.36□□□□□ -0.91
HTT-212ENST00000513639 PI4KAP1Q8N8J0 262 aa9.36□□□□□ -0.91
HTT-212ENST00000513639 TSR2Q969E8 191 aaKnown RBP9.36□□□□□ -0.91
HTT-212ENST00000513639 EYA3Q99504 573 aa9.36□□□□□ -0.91
HTT-212ENST00000513639 COL11A2P13942 1736 aaPredicted RBP9.36□□□□□ -0.91
HTT-212ENST00000513639 WDR90Q96KV7 1748 aa9.36□□□□□ -0.91
HTT-212ENST00000513639 CCDC88AQ3V6T2 1871 aa9.36□□□□□ -0.91
HTT-212ENST00000513639 TMEM88BA6NKF7 163 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 C6orf229H3BNL8 230 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 PDE8AO60658 829 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
HTT-212ENST00000513639 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 POTEJP0CG39 1038 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 CXCL9Q07325 125 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 CIAPIN1Q6FI81 312 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 ZC3H12CQ9C0D7 883 aaKnown RBP9.35□□□□□ -0.91
HTT-212ENST00000513639 ADARB2Q9NS39 739 aaKnown RBP9.35□□□□□ -0.91
HTT-212ENST00000513639 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
HTT-212ENST00000513639 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
HTT-212ENST00000513639 SNED1Q8TER0 1413 aa9.34□□□□□ -0.91
HTT-212ENST00000513639 G3V3G9 751 aa9.34□□□□□ -0.91
HTT-212ENST00000513639 H7C1D1 291 aa9.34□□□□□ -0.91
HTT-212ENST00000513639 EPS15P42566 896 aa9.34□□□□□ -0.91
HTT-212ENST00000513639 DCAF8Q5TAQ9 597 aa9.34□□□□□ -0.91
HTT-212ENST00000513639 IFFO2Q5TF58 517 aa9.34□□□□□ -0.91
HTT-212ENST00000513639 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
HTT-212ENST00000513639 CELF1Q92879 486 aaKnown RBP9.34□□□□□ -0.91
HTT-212ENST00000513639 ZNF428Q96B54 188 aa9.34□□□□□ -0.91
HTT-212ENST00000513639 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
HTT-212ENST00000513639 PASKQ96RG2 1323 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 CDHR2Q9BYE9 1310 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 CAPN15O75808 1086 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 RAD17O75943 681 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 SCNN1DP51172 638 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 MAP1SQ66K74 1059 aaPredicted RBP9.33□□□□□ -0.92
HTT-212ENST00000513639 FAM9BQ8IZU0 186 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 DPF2Q92785 391 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 CDC5LQ99459 802 aaKnown RBP9.33□□□□□ -0.92
HTT-212ENST00000513639 MYH16Q9H6N6 1097 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 PODXL2Q9NZ53 605 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 GPRC5DQ9NZD1 345 aa9.33□□□□□ -0.92
HTT-212ENST00000513639 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
HTT-212ENST00000513639 ARFGEF2Q9Y6D5 1785 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 H7C1W4 665 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 VAMP4O75379 141 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 GMPSP49915 693 aaPredicted RBP9.32□□□□□ -0.92
HTT-212ENST00000513639 GPSM2P81274 684 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 DEFB115Q30KQ5 88 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 ANKRD18AQ8IVF6 992 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 TBC1D16Q8TBP0 767 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 POLLQ9UGP5 575 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 CNOT7Q9UIV1 285 aaKnown RBP9.32□□□□□ -0.92
HTT-212ENST00000513639 GGA1Q9UJY5 639 aa9.32□□□□□ -0.92
HTT-212ENST00000513639 SCN4AP35499 1836 aa9.31□□□□□ -0.92
HTT-212ENST00000513639 RIMBP2O15034 1052 aa9.31□□□□□ -0.92
HTT-212ENST00000513639 IGKV5-2P06315 115 aa9.31□□□□□ -0.92
HTT-212ENST00000513639 RPS12P25398 132 aaKnown RBP9.31□□□□□ -0.92
HTT-212ENST00000513639 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
HTT-212ENST00000513639 FLIIQ13045 1269 aa9.31□□□□□ -0.92
HTT-212ENST00000513639 FKBP5Q13451 457 aaPredicted RBP9.31□□□□□ -0.92
HTT-212ENST00000513639 LINS1Q8NG48 757 aa9.31□□□□□ -0.92
HTT-212ENST00000513639 TTLL11Q8NHH1 800 aa9.31□□□□□ -0.92
HTT-212ENST00000513639 SPINK5Q9NQ38 1064 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms