RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 KIAA2012Q0VF49 1180 aa14.25□□□□□ -0.13
SKP2-207ENST00000513263 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
SKP2-207ENST00000513263 NEUROD2Q15784 382 aa14.25□□□□□ -0.13
SKP2-207ENST00000513263 DEFB115Q30KQ5 88 aa14.25□□□□□ -0.13
SKP2-207ENST00000513263 CHPF2Q9P2E5 772 aa14.25□□□□□ -0.13
SKP2-207ENST00000513263 ABT1Q9ULW3 272 aaKnown RBP14.25□□□□□ -0.13
SKP2-207ENST00000513263 DUOX1Q9NRD9 1551 aa14.25□□□□□ -0.13
SKP2-207ENST00000513263 ANXA1P04083 346 aa14.24□□□□□ -0.13
SKP2-207ENST00000513263 AOC3Q16853 763 aa14.24□□□□□ -0.13
SKP2-207ENST00000513263 ANKRD13DQ6ZTN6 518 aa14.24□□□□□ -0.13
SKP2-207ENST00000513263 CCDC146Q8IYE0 955 aa14.24□□□□□ -0.13
SKP2-207ENST00000513263 ZC3H15Q8WU90 426 aaKnown RBP14.24□□□□□ -0.13
SKP2-207ENST00000513263 BEGAINQ9BUH8 593 aa14.24□□□□□ -0.13
SKP2-207ENST00000513263 GPRC5DQ9NZD1 345 aa14.24□□□□□ -0.13
SKP2-207ENST00000513263 LAS1LQ9Y4W2 734 aaKnown RBP14.24□□□□□ -0.13
SKP2-207ENST00000513263 TCERG1O14776 1098 aaKnown RBP14.23□□□□□ -0.13
SKP2-207ENST00000513263 VEGFBP49765 207 aa14.23□□□□□ -0.13
SKP2-207ENST00000513263 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
SKP2-207ENST00000513263 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
SKP2-207ENST00000513263 CIAPIN1Q6FI81 312 aa14.23□□□□□ -0.13
SKP2-207ENST00000513263 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
SKP2-207ENST00000513263 TRIM35Q9UPQ4 493 aa14.23□□□□□ -0.13
SKP2-207ENST00000513263 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
SKP2-207ENST00000513263 HCLS1P14317 486 aaPredicted RBP14.22□□□□□ -0.13
SKP2-207ENST00000513263 GNAI1P63096 354 aa14.22□□□□□ -0.13
SKP2-207ENST00000513263 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
SKP2-207ENST00000513263 EYA3Q99504 573 aa14.22□□□□□ -0.13
SKP2-207ENST00000513263 BCL2L13Q9BXK5 485 aa14.22□□□□□ -0.13
SKP2-207ENST00000513263 IFT57Q9NWB7 429 aa14.22□□□□□ -0.13
SKP2-207ENST00000513263 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
SKP2-207ENST00000513263 FOXN1O15353 648 aa14.21□□□□□ -0.13
SKP2-207ENST00000513263 EPS15P42566 896 aa14.21□□□□□ -0.13
SKP2-207ENST00000513263 CXCL9Q07325 125 aa14.21□□□□□ -0.13
SKP2-207ENST00000513263 TRIM28Q13263 835 aaKnown RBP14.21□□□□□ -0.13
SKP2-207ENST00000513263 SF3B3Q15393 1217 aaKnown RBP14.21□□□□□ -0.13
SKP2-207ENST00000513263 HHIPL1Q96JK4 782 aa14.21□□□□□ -0.13
SKP2-207ENST00000513263 ISCA1Q9BUE6 129 aa14.21□□□□□ -0.13
SKP2-207ENST00000513263 WBP1LQ9NX94 342 aa14.21□□□□□ -0.13
SKP2-207ENST00000513263 DDX58O95786 925 aaKnown RBP14.2□□□□□ -0.14
SKP2-207ENST00000513263 RPS12P25398 132 aaKnown RBP14.2□□□□□ -0.14
SKP2-207ENST00000513263 DUSP27Q5VZP5 1158 aa14.2□□□□□ -0.14
SKP2-207ENST00000513263 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
SKP2-207ENST00000513263 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
SKP2-207ENST00000513263 AKAP11Q9UKA4 1901 aa14.19□□□□□ -0.14
SKP2-207ENST00000513263 H7C1D1 291 aa14.19□□□□□ -0.14
SKP2-207ENST00000513263 CA12O43570 354 aa14.19□□□□□ -0.14
SKP2-207ENST00000513263 GMPSP49915 693 aaPredicted RBP14.19□□□□□ -0.14
SKP2-207ENST00000513263 PAXIP1Q6ZW49 1069 aaPredicted RBP14.19□□□□□ -0.14
SKP2-207ENST00000513263 DPF2Q92785 391 aa14.19□□□□□ -0.14
SKP2-207ENST00000513263 TLL2Q9Y6L7 1015 aa14.19□□□□□ -0.14
SKP2-207ENST00000513263 SPEF2Q9C093 1822 aa14.19□□□□□ -0.14
SKP2-207ENST00000513263 ZNF609O15014 1411 aa14.18□□□□□ -0.14
SKP2-207ENST00000513263 CAPN15O75808 1086 aa14.18□□□□□ -0.14
SKP2-207ENST00000513263 MAP2K2P36507 400 aa14.18□□□□□ -0.14
SKP2-207ENST00000513263 WASHC4Q2M389 1173 aa14.18□□□□□ -0.14
SKP2-207ENST00000513263 RIC3Q7Z5B4 369 aa14.18□□□□□ -0.14
SKP2-207ENST00000513263 ZBTB38Q8NAP3 1195 aaPredicted RBP14.18□□□□□ -0.14
SKP2-207ENST00000513263 MBIPQ9NS73 344 aa14.18□□□□□ -0.14
SKP2-207ENST00000513263 SCN9AQ15858 1988 aa14.18□□□□□ -0.14
SKP2-207ENST00000513263 IRS4O14654 1257 aaPredicted RBP14.17□□□□□ -0.14
SKP2-207ENST00000513263 ZNF853P0CG23 659 aa14.17□□□□□ -0.14
SKP2-207ENST00000513263 KRT24Q2M2I5 525 aa14.17□□□□□ -0.14
SKP2-207ENST00000513263 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
SKP2-207ENST00000513263 CDC37L1Q7L3B6 337 aa14.17□□□□□ -0.14
SKP2-207ENST00000513263 CCDC191Q8NCU4 936 aa14.17□□□□□ -0.14
SKP2-207ENST00000513263 CAPNS2Q96L46 248 aa14.17□□□□□ -0.14
SKP2-207ENST00000513263 PGAP2Q9UHJ9 254 aa14.17□□□□□ -0.14
SKP2-207ENST00000513263 NSFL1CQ9UNZ2 370 aaKnown RBP14.17□□□□□ -0.14
SKP2-207ENST00000513263 CCDC30Q5VVM6 783 aa14.16□□□□□ -0.14
SKP2-207ENST00000513263 FAM89AQ96GI7 184 aa14.16□□□□□ -0.14
SKP2-207ENST00000513263 C6orf229H3BNL8 230 aa14.15□□□□□ -0.14
SKP2-207ENST00000513263 RAD17O75943 681 aa14.15□□□□□ -0.14
SKP2-207ENST00000513263 CELF2O95319 508 aaKnown RBP14.15□□□□□ -0.14
SKP2-207ENST00000513263 SAPCD2Q86UD0 394 aa14.15□□□□□ -0.14
SKP2-207ENST00000513263 GPR101Q96P66 508 aaPredicted RBP14.15□□□□□ -0.14
SKP2-207ENST00000513263 PODXL2Q9NZ53 605 aa14.15□□□□□ -0.14
SKP2-207ENST00000513263 CNOT7Q9UIV1 285 aaKnown RBP14.15□□□□□ -0.14
SKP2-207ENST00000513263 ATP5J2-PTCD1G3V325 749 aa14.14□□□□□ -0.15
SKP2-207ENST00000513263 HSPA8P11142 646 aaKnown RBP14.14□□□□□ -0.15
SKP2-207ENST00000513263 LBX1P52954 281 aa14.14□□□□□ -0.15
SKP2-207ENST00000513263 RPS8P62241 208 aaKnown RBP14.14□□□□□ -0.15
SKP2-207ENST00000513263 MICALL2Q8IY33 904 aa14.14□□□□□ -0.15
SKP2-207ENST00000513263 CELF1Q92879 486 aaKnown RBP14.14□□□□□ -0.15
SKP2-207ENST00000513263 CWC25Q9NXE8 425 aaPredicted RBP14.14□□□□□ -0.15
SKP2-207ENST00000513263 YDJCA8MPS7 323 aa14.13□□□□□ -0.15
SKP2-207ENST00000513263 G3V3G9 751 aa14.13□□□□□ -0.15
SKP2-207ENST00000513263 APAF1O14727 1248 aa14.13□□□□□ -0.15
SKP2-207ENST00000513263 PDE8AO60658 829 aa14.13□□□□□ -0.15
SKP2-207ENST00000513263 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
SKP2-207ENST00000513263 BRPF1P55201 1214 aaPredicted RBP14.13□□□□□ -0.15
SKP2-207ENST00000513263 NEXNQ0ZGT2 675 aa14.13□□□□□ -0.15
SKP2-207ENST00000513263 DCAF8Q5TAQ9 597 aa14.13□□□□□ -0.15
SKP2-207ENST00000513263 CST9Q5W186 159 aa14.13□□□□□ -0.15
SKP2-207ENST00000513263 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
SKP2-207ENST00000513263 ZC3H12CQ9C0D7 883 aaKnown RBP14.13□□□□□ -0.15
SKP2-207ENST00000513263 TRAF5O00463 557 aa14.12□□□□□ -0.15
SKP2-207ENST00000513263 PSMD14O00487 310 aa14.12□□□□□ -0.15
SKP2-207ENST00000513263 ECE2O60344 883 aa14.12□□□□□ -0.15
SKP2-207ENST00000513263 NOGQ13253 232 aa14.12□□□□□ -0.15
SKP2-207ENST00000513263 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms