RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 RFC4P35249 363 aa11.61□□□□□ -0.55
DHFR-206ENST00000513048 RGS3P49796 1198 aa11.61□□□□□ -0.55
DHFR-206ENST00000513048 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
DHFR-206ENST00000513048 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
DHFR-206ENST00000513048 PA2G4Q9UQ80 394 aaKnown RBP11.61□□□□□ -0.55
DHFR-206ENST00000513048 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
DHFR-206ENST00000513048 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
DHFR-206ENST00000513048 SALL3Q9BXA9 1300 aa11.6□□□□□ -0.55
DHFR-206ENST00000513048 CASZ1Q86V15 1759 aa11.6□□□□□ -0.55
DHFR-206ENST00000513048 TTLL11Q8NHH1 800 aa11.6□□□□□ -0.55
DHFR-206ENST00000513048 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
DHFR-206ENST00000513048 PDE8AO60658 829 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 CTSWP56202 376 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 NFIXQ14938 502 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 DEFB132Q7Z7B7 95 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 COL23A1Q86Y22 540 aaPredicted RBP11.59□□□□□ -0.55
DHFR-206ENST00000513048 C16orf71Q8IYS4 520 aaPredicted RBP11.59□□□□□ -0.55
DHFR-206ENST00000513048 KLHDC4Q8TBB5 520 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 RHPN1Q8TCX5 695 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 OTUD7AQ8TE49 926 aaPredicted RBP11.59□□□□□ -0.55
DHFR-206ENST00000513048 LRRCC1Q9C099 1032 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 ANO8Q9HCE9 1232 aaPredicted RBP11.59□□□□□ -0.55
DHFR-206ENST00000513048 LRP5O75197 1615 aa11.59□□□□□ -0.55
DHFR-206ENST00000513048 ABCC12Q96J65 1359 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 APBB1O00213 710 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 SASH1O94885 1247 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 HCLS1P14317 486 aaPredicted RBP11.58□□□□□ -0.56
DHFR-206ENST00000513048 TM4SF1P30408 202 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 ERFEQ4G0M1 354 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 HSP90AB4PQ58FF6 505 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 BICDL1Q6ZP65 573 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 NUTM1Q86Y26 1132 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 PELP1Q8IZL8 1130 aaKnown RBP11.58□□□□□ -0.56
DHFR-206ENST00000513048 SETDB2Q96T68 719 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
DHFR-206ENST00000513048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.58□□□□□ -0.56
DHFR-206ENST00000513048 RTL9Q8NET4 1388 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 COL4A1P02462 1669 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 BAG6P46379 1132 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 ATG9AQ7Z3C6 839 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 FLAD1Q8NFF5 587 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 KIF1BPQ96EK5 621 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 GREM2Q9H772 168 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 TFCP2L1Q9NZI6 479 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 NRXN2Q9P2S2 1712 aa11.57□□□□□ -0.56
DHFR-206ENST00000513048 CARMIL3Q8ND23 1372 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
DHFR-206ENST00000513048 CIAO1O76071 339 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 DDR1Q08345 913 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 SLC15A2Q16348 729 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 RIC1Q4ADV7 1423 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 CCDC125Q86Z20 511 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 ERC1Q8IUD2 1116 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 ZNF594Q96JF6 807 aaPredicted RBP11.56□□□□□ -0.56
DHFR-206ENST00000513048 NYXQ9GZU5 481 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 IL1RAPL2Q9NP60 686 aa11.56□□□□□ -0.56
DHFR-206ENST00000513048 EYA2O00167 538 aa11.55□□□□□ -0.56
DHFR-206ENST00000513048 G3BP1Q13283 466 aaKnown RBP eCLIP11.55□□□□□ -0.56
DHFR-206ENST00000513048 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
DHFR-206ENST00000513048 SF3B3Q15393 1217 aaKnown RBP11.55□□□□□ -0.56
DHFR-206ENST00000513048 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
DHFR-206ENST00000513048 CCDC85AQ96PX6 553 aaPredicted RBP11.55□□□□□ -0.56
DHFR-206ENST00000513048 PUS3Q9BZE2 481 aaKnown RBP11.55□□□□□ -0.56
DHFR-206ENST00000513048 SIL1Q9H173 461 aa11.55□□□□□ -0.56
DHFR-206ENST00000513048 OSBPL3Q9H4L5 887 aa11.55□□□□□ -0.56
DHFR-206ENST00000513048 STAP2Q9UGK3 403 aa11.55□□□□□ -0.56
DHFR-206ENST00000513048 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
DHFR-206ENST00000513048 CHMP3Q9Y3E7 222 aa11.55□□□□□ -0.56
DHFR-206ENST00000513048 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
DHFR-206ENST00000513048 HSP90B1P14625 803 aaKnown RBP11.54□□□□□ -0.56
DHFR-206ENST00000513048 ITGA6P23229 1130 aa11.54□□□□□ -0.56
DHFR-206ENST00000513048 IFIT5Q13325 482 aaKnown RBP11.54□□□□□ -0.56
DHFR-206ENST00000513048 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
DHFR-206ENST00000513048 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
DHFR-206ENST00000513048 PRR5LQ6MZQ0 368 aa11.54□□□□□ -0.56
DHFR-206ENST00000513048 TPTE2Q6XPS3 522 aa11.54□□□□□ -0.56
DHFR-206ENST00000513048 STK32BQ9NY57 414 aa11.54□□□□□ -0.56
DHFR-206ENST00000513048 ANKRD18BA2A2Z9 1011 aa11.53□□□□□ -0.56
DHFR-206ENST00000513048 IL15P40933 162 aaPredicted RBP11.53□□□□□ -0.56
DHFR-206ENST00000513048 PDE1AP54750 535 aa11.53□□□□□ -0.56
DHFR-206ENST00000513048 TFCP2Q12800 502 aa11.53□□□□□ -0.56
DHFR-206ENST00000513048 OS9Q13438 667 aaPredicted RBP11.53□□□□□ -0.56
DHFR-206ENST00000513048 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
DHFR-206ENST00000513048 EAF2Q96CJ1 260 aaPredicted RBP11.53□□□□□ -0.56
DHFR-206ENST00000513048 SEC31BQ9NQW1 1179 aa11.53□□□□□ -0.56
DHFR-206ENST00000513048 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
DHFR-206ENST00000513048 RIPOR2Q9Y4F9 1068 aa11.53□□□□□ -0.56
DHFR-206ENST00000513048 HAX1O00165 279 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 SERPINB2P05120 415 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 GSPT1P15170 499 aaKnown RBP11.52□□□□□ -0.57
DHFR-206ENST00000513048 MX1P20591 662 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 CCDC152Q4G0S7 254 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 BMP2KLQ5H9B9 411 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 TTC22Q5TAA0 569 aa11.52□□□□□ -0.57
DHFR-206ENST00000513048 NLGN1Q8N2Q7 840 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms