RNA–Protein interactions for RNA: ENST00000512868.6

SERF1A-208, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-208ENST00000512868 RASSF7Q02833 373 aa18.47■□□□□ 0.55
SERF1A-208ENST00000512868 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
SERF1A-208ENST00000512868 ZC3H4Q9UPT8 1303 aaKnown RBP18.47■□□□□ 0.55
SERF1A-208ENST00000512868 FKBP4Q02790 459 aaKnown RBP eCLIP18.46■□□□□ 0.55
SERF1A-208ENST00000512868 SP8Q8IXZ3 490 aa18.46■□□□□ 0.55
SERF1A-208ENST00000512868 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
SERF1A-208ENST00000512868 C9orf78Q9NZ63 289 aaPredicted RBP18.46■□□□□ 0.55
SERF1A-208ENST00000512868 CTSWP56202 376 aa18.45■□□□□ 0.54
SERF1A-208ENST00000512868 PSMD1Q99460 953 aa18.45■□□□□ 0.54
SERF1A-208ENST00000512868 PLA2G12BQ9BX93 195 aa18.45■□□□□ 0.54
SERF1A-208ENST00000512868 API5Q9BZZ5 524 aaKnown RBP18.45■□□□□ 0.54
SERF1A-208ENST00000512868 GRM8O00222 908 aa18.44■□□□□ 0.54
SERF1A-208ENST00000512868 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
SERF1A-208ENST00000512868 ARHGAP45Q92619 1136 aa18.44■□□□□ 0.54
SERF1A-208ENST00000512868 NOB1Q9ULX3 412 aaKnown RBP18.44■□□□□ 0.54
SERF1A-208ENST00000512868 RPS8P62241 208 aaKnown RBP18.43■□□□□ 0.54
SERF1A-208ENST00000512868 TTLL11Q8NHH1 800 aa18.43■□□□□ 0.54
SERF1A-208ENST00000512868 CDC5LQ99459 802 aaKnown RBP18.43■□□□□ 0.54
SERF1A-208ENST00000512868 CCT4P50991 539 aaKnown RBP18.42■□□□□ 0.54
SERF1A-208ENST00000512868 CASP7P55210 303 aa18.42■□□□□ 0.54
SERF1A-208ENST00000512868 OLFM4Q6UX06 510 aa18.42■□□□□ 0.54
SERF1A-208ENST00000512868 SUPT20HQ8NEM7 779 aa18.42■□□□□ 0.54
SERF1A-208ENST00000512868 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
SERF1A-208ENST00000512868 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
SERF1A-208ENST00000512868 CACNA1FO60840 1977 aa18.41■□□□□ 0.54
SERF1A-208ENST00000512868 DPP8Q6V1X1 898 aaPredicted RBP18.41■□□□□ 0.54
SERF1A-208ENST00000512868 VPS33BQ9H267 617 aa18.41■□□□□ 0.54
SERF1A-208ENST00000512868 GPBP1L1Q9HC44 474 aaPredicted RBP18.41■□□□□ 0.54
SERF1A-208ENST00000512868 SLX4Q8IY92 1834 aa18.4■□□□□ 0.54
SERF1A-208ENST00000512868 DPY19L2Q6NUT2 758 aa18.4■□□□□ 0.54
SERF1A-208ENST00000512868 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
SERF1A-208ENST00000512868 MPNDQ8N594 471 aa18.4■□□□□ 0.54
SERF1A-208ENST00000512868 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
SERF1A-208ENST00000512868 KDM2BQ8NHM5 1336 aa18.4■□□□□ 0.54
SERF1A-208ENST00000512868 CSF1RP07333 972 aa18.39■□□□□ 0.53
SERF1A-208ENST00000512868 IARSP41252 1262 aaKnown RBP18.39■□□□□ 0.53
SERF1A-208ENST00000512868 PRELPP51888 382 aa18.39■□□□□ 0.53
SERF1A-208ENST00000512868 JDP2Q8WYK2 163 aa18.39■□□□□ 0.53
SERF1A-208ENST00000512868 GREM2Q9H772 168 aa18.39■□□□□ 0.53
SERF1A-208ENST00000512868 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
SERF1A-208ENST00000512868 ZNF277Q9NRM2 450 aaPredicted RBP18.39■□□□□ 0.53
SERF1A-208ENST00000512868 UTYO14607 1347 aa18.39■□□□□ 0.53
SERF1A-208ENST00000512868 DDX60Q8IY21 1712 aaKnown RBP18.38■□□□□ 0.53
SERF1A-208ENST00000512868 RTFDC1Q9BY42 306 aaPredicted RBP18.38■□□□□ 0.53
SERF1A-208ENST00000512868 HDAC5Q9UQL6 1122 aa18.38■□□□□ 0.53
SERF1A-208ENST00000512868 SNED1Q8TER0 1413 aa18.38■□□□□ 0.53
SERF1A-208ENST00000512868 IGHMBP2P38935 993 aaKnown RBP18.37■□□□□ 0.53
SERF1A-208ENST00000512868 ZNF526Q8TF50 670 aaPredicted RBP18.37■□□□□ 0.53
SERF1A-208ENST00000512868 FRAT1Q92837 279 aaPredicted RBP18.37■□□□□ 0.53
SERF1A-208ENST00000512868 NSFL1CQ9UNZ2 370 aaKnown RBP18.37■□□□□ 0.53
SERF1A-208ENST00000512868 LAMB2P55268 1798 aa18.37■□□□□ 0.53
SERF1A-208ENST00000512868 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
SERF1A-208ENST00000512868 BCAR3O75815 825 aa18.36■□□□□ 0.53
SERF1A-208ENST00000512868 NBPF7P0C2Y1 421 aaPredicted RBP18.36■□□□□ 0.53
SERF1A-208ENST00000512868 ITGA6P23229 1130 aa18.36■□□□□ 0.53
SERF1A-208ENST00000512868 FOXO4P98177 505 aa18.36■□□□□ 0.53
SERF1A-208ENST00000512868 IFIT5Q13325 482 aaKnown RBP18.36■□□□□ 0.53
SERF1A-208ENST00000512868 ATF7IPQ6VMQ6 1270 aa18.36■□□□□ 0.53
SERF1A-208ENST00000512868 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
SERF1A-208ENST00000512868 GLTPD2A6NH11 291 aa18.35■□□□□ 0.53
SERF1A-208ENST00000512868 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
SERF1A-208ENST00000512868 LARGE2Q8N3Y3 721 aa18.35■□□□□ 0.53
SERF1A-208ENST00000512868 MPHOSPH8Q99549 860 aa18.35■□□□□ 0.53
SERF1A-208ENST00000512868 USP44Q9H0E7 712 aa18.35■□□□□ 0.53
SERF1A-208ENST00000512868 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
SERF1A-208ENST00000512868 CHMP3Q9Y3E7 222 aa18.35■□□□□ 0.53
SERF1A-208ENST00000512868 PPIP5K2O43314 1243 aa18.34■□□□□ 0.53
SERF1A-208ENST00000512868 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
SERF1A-208ENST00000512868 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
SERF1A-208ENST00000512868 LMBR1LQ6UX01 489 aa18.34■□□□□ 0.53
SERF1A-208ENST00000512868 EYA3Q99504 573 aa18.34■□□□□ 0.53
SERF1A-208ENST00000512868 PODXL2Q9NZ53 605 aa18.34■□□□□ 0.53
SERF1A-208ENST00000512868 FER1L6Q2WGJ9 1857 aa18.33■□□□□ 0.53
SERF1A-208ENST00000512868 TRIM27P14373 513 aa18.33■□□□□ 0.52
SERF1A-208ENST00000512868 INTS3Q68E01 1043 aaKnown RBP18.33■□□□□ 0.52
SERF1A-208ENST00000512868 NIM1KQ8IY84 436 aa18.33■□□□□ 0.52
SERF1A-208ENST00000512868 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
SERF1A-208ENST00000512868 GPSM2P81274 684 aa18.32■□□□□ 0.52
SERF1A-208ENST00000512868 KIAA2012Q0VF49 1180 aa18.32■□□□□ 0.52
SERF1A-208ENST00000512868 WASHC4Q2M389 1173 aa18.32■□□□□ 0.52
SERF1A-208ENST00000512868 SUCLG2Q96I99 432 aa18.32■□□□□ 0.52
SERF1A-208ENST00000512868 XDHP47989 1333 aa18.31■□□□□ 0.52
SERF1A-208ENST00000512868 FZD9O00144 591 aa18.31■□□□□ 0.52
SERF1A-208ENST00000512868 UBTFL1P0CB47 393 aaPredicted RBP18.31■□□□□ 0.52
SERF1A-208ENST00000512868 EIF6P56537 245 aaKnown RBP18.31■□□□□ 0.52
SERF1A-208ENST00000512868 AOC3Q16853 763 aa18.31■□□□□ 0.52
SERF1A-208ENST00000512868 TAF7LQ5H9L4 462 aa18.31■□□□□ 0.52
SERF1A-208ENST00000512868 EPHA10Q5JZY3 1008 aa18.31■□□□□ 0.52
SERF1A-208ENST00000512868 SLC51AQ86UW1 340 aa18.31■□□□□ 0.52
SERF1A-208ENST00000512868 ANKRD2Q9GZV1 360 aa18.31■□□□□ 0.52
SERF1A-208ENST00000512868 GGA1Q9UJY5 639 aa18.31■□□□□ 0.52
SERF1A-208ENST00000512868 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
SERF1A-208ENST00000512868 TBC1D16Q8TBP0 767 aa18.3■□□□□ 0.52
SERF1A-208ENST00000512868 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
SERF1A-208ENST00000512868 BICC1Q9H694 974 aaKnown RBP18.3■□□□□ 0.52
SERF1A-208ENST00000512868 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
SERF1A-208ENST00000512868 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
SERF1A-208ENST00000512868 GNAI3P08754 354 aa18.29■□□□□ 0.52
SERF1A-208ENST00000512868 MS4A1P11836 297 aa18.29■□□□□ 0.52
SERF1A-208ENST00000512868 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms