RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 SMC1BQ8NDV3 1235 aa15.54■□□□□ 0.08
CDK7-208ENST00000512687 SALL2Q9Y467 1007 aaPredicted RBP15.54■□□□□ 0.08
CDK7-208ENST00000512687 FZD9O00144 591 aa15.53■□□□□ 0.08
CDK7-208ENST00000512687 POTEIP0CG38 1075 aa15.53■□□□□ 0.08
CDK7-208ENST00000512687 POTEJP0CG39 1038 aa15.53■□□□□ 0.08
CDK7-208ENST00000512687 GOLGA2Q08379 1002 aa15.53■□□□□ 0.08
CDK7-208ENST00000512687 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
CDK7-208ENST00000512687 CCDC30Q5VVM6 783 aa15.53■□□□□ 0.08
CDK7-208ENST00000512687 RIC3Q7Z5B4 369 aa15.53■□□□□ 0.08
CDK7-208ENST00000512687 ATP6V0A2Q9Y487 856 aa15.53■□□□□ 0.08
CDK7-208ENST00000512687 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.08
CDK7-208ENST00000512687 TRIM28Q13263 835 aaKnown RBP15.52■□□□□ 0.08
CDK7-208ENST00000512687 L3MBTL3Q96JM7 780 aaPredicted RBP15.52■□□□□ 0.08
CDK7-208ENST00000512687 MYD88Q99836 296 aa15.52■□□□□ 0.08
CDK7-208ENST00000512687 PSME4Q14997 1843 aa15.52■□□□□ 0.07
CDK7-208ENST00000512687 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
CDK7-208ENST00000512687 GRAPQ13588 217 aa15.51■□□□□ 0.07
CDK7-208ENST00000512687 TWISTNBQ3B726 338 aaPredicted RBP15.51■□□□□ 0.07
CDK7-208ENST00000512687 GRAPLQ8TC17 118 aaPredicted RBP15.51■□□□□ 0.07
CDK7-208ENST00000512687 A0A1B0GUL6 1792 aa15.5■□□□□ 0.07
CDK7-208ENST00000512687 SCN9AQ15858 1988 aa15.5■□□□□ 0.07
CDK7-208ENST00000512687 DDX46Q7L014 1031 aaKnown RBP15.5■□□□□ 0.07
CDK7-208ENST00000512687 G2E3Q7L622 706 aa15.5■□□□□ 0.07
CDK7-208ENST00000512687 FAM9BQ8IZU0 186 aa15.5■□□□□ 0.07
CDK7-208ENST00000512687 DNAJC5GQ8N7S2 189 aa15.5■□□□□ 0.07
CDK7-208ENST00000512687 TRPM7Q96QT4 1865 aa15.49■□□□□ 0.07
CDK7-208ENST00000512687 IRS4O14654 1257 aaPredicted RBP15.49■□□□□ 0.07
CDK7-208ENST00000512687 SF3B3Q15393 1217 aaKnown RBP15.49■□□□□ 0.07
CDK7-208ENST00000512687 AOC3Q16853 763 aa15.49■□□□□ 0.07
CDK7-208ENST00000512687 GRIPAP1Q4V328 841 aa15.49■□□□□ 0.07
CDK7-208ENST00000512687 SP8Q8IXZ3 490 aa15.49■□□□□ 0.07
CDK7-208ENST00000512687 LARGE2Q8N3Y3 721 aa15.49■□□□□ 0.07
CDK7-208ENST00000512687 JARID2Q92833 1246 aaPredicted RBP15.49■□□□□ 0.07
CDK7-208ENST00000512687 CELF1Q92879 486 aaKnown RBP15.49■□□□□ 0.07
CDK7-208ENST00000512687 METTL22Q9BUU2 404 aaPredicted RBP15.49■□□□□ 0.07
CDK7-208ENST00000512687 TAF1DQ9H5J8 278 aaPredicted RBP15.49■□□□□ 0.07
CDK7-208ENST00000512687 MAP3K2Q9Y2U5 619 aa15.49■□□□□ 0.07
CDK7-208ENST00000512687 ZNF646O15015 1829 aaPredicted RBP15.48■□□□□ 0.07
CDK7-208ENST00000512687 BBOX1O75936 387 aa15.48■□□□□ 0.07
CDK7-208ENST00000512687 ZBTB38Q8NAP3 1195 aaPredicted RBP15.48■□□□□ 0.07
CDK7-208ENST00000512687 CCDC191Q8NCU4 936 aa15.48■□□□□ 0.07
CDK7-208ENST00000512687 JDP2Q8WYK2 163 aa15.48■□□□□ 0.07
CDK7-208ENST00000512687 RTFDC1Q9BY42 306 aaPredicted RBP15.48■□□□□ 0.07
CDK7-208ENST00000512687 PI4KAP2A4QPH2 592 aa15.47■□□□□ 0.07
CDK7-208ENST00000512687 PPIP5K2O43314 1243 aa15.47■□□□□ 0.07
CDK7-208ENST00000512687 IGKV5-2P06315 115 aa15.47■□□□□ 0.07
CDK7-208ENST00000512687 WDR63Q8IWG1 891 aa15.47■□□□□ 0.07
CDK7-208ENST00000512687 PI4KAP1Q8N8J0 262 aa15.47■□□□□ 0.07
CDK7-208ENST00000512687 IQCA1LA6NCM1 817 aa15.46■□□□□ 0.07
CDK7-208ENST00000512687 DDX58O95786 925 aaKnown RBP15.46■□□□□ 0.07
CDK7-208ENST00000512687 PCCAP05165 728 aaPredicted RBP15.46■□□□□ 0.07
CDK7-208ENST00000512687 EXOSC9Q06265 439 aaKnown RBP15.46■□□□□ 0.07
CDK7-208ENST00000512687 DPP8Q6V1X1 898 aaPredicted RBP15.46■□□□□ 0.07
CDK7-208ENST00000512687 KSR2Q6VAB6 950 aa15.46■□□□□ 0.07
CDK7-208ENST00000512687 GPC2Q8N158 579 aa15.46■□□□□ 0.07
CDK7-208ENST00000512687 MPNDQ8N594 471 aa15.46■□□□□ 0.07
CDK7-208ENST00000512687 STK31Q9BXU1 1019 aa15.46■□□□□ 0.07
CDK7-208ENST00000512687 CWC25Q9NXE8 425 aaPredicted RBP15.46■□□□□ 0.07
CDK7-208ENST00000512687 HACL1Q9UJ83 578 aa15.46■□□□□ 0.07
CDK7-208ENST00000512687 VAMP4O75379 141 aa15.45■□□□□ 0.06
CDK7-208ENST00000512687 EIF6P56537 245 aaKnown RBP15.45■□□□□ 0.06
CDK7-208ENST00000512687 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
CDK7-208ENST00000512687 NIM1KQ8IY84 436 aa15.45■□□□□ 0.06
CDK7-208ENST00000512687 CHMP4AQ9BY43 222 aa15.45■□□□□ 0.06
CDK7-208ENST00000512687 SEC31BQ9NQW1 1179 aa15.45■□□□□ 0.06
CDK7-208ENST00000512687 GJA3Q9Y6H8 435 aa15.45■□□□□ 0.06
CDK7-208ENST00000512687 POLR2AP24928 1970 aaKnown RBP15.45■□□□□ 0.06
CDK7-208ENST00000512687 EPHX2P34913 555 aa15.44■□□□□ 0.06
CDK7-208ENST00000512687 SCNN1DP51172 638 aa15.44■□□□□ 0.06
CDK7-208ENST00000512687 KIAA2012Q0VF49 1180 aa15.44■□□□□ 0.06
CDK7-208ENST00000512687 CWF19L2Q2TBE0 894 aaKnown RBP15.44■□□□□ 0.06
CDK7-208ENST00000512687 EAPPQ56P03 285 aaPredicted RBP15.44■□□□□ 0.06
CDK7-208ENST00000512687 TMC4Q7Z404 712 aa15.44■□□□□ 0.06
CDK7-208ENST00000512687 LDHDQ86WU2 507 aa15.44■□□□□ 0.06
CDK7-208ENST00000512687 TMX4Q9H1E5 349 aaPredicted RBP15.44■□□□□ 0.06
CDK7-208ENST00000512687 ZNF521Q96K83 1311 aa15.43■□□□□ 0.06
CDK7-208ENST00000512687 CDHR2Q9BYE9 1310 aa15.43■□□□□ 0.06
CDK7-208ENST00000512687 PDE8AO60658 829 aa15.43■□□□□ 0.06
CDK7-208ENST00000512687 GPSM2P81274 684 aa15.43■□□□□ 0.06
CDK7-208ENST00000512687 FLIIQ13045 1269 aa15.43■□□□□ 0.06
CDK7-208ENST00000512687 SUPT20HQ8NEM7 779 aa15.43■□□□□ 0.06
CDK7-208ENST00000512687 KLRG1Q96E93 195 aa15.43■□□□□ 0.06
CDK7-208ENST00000512687 CCDC85AQ96PX6 553 aaPredicted RBP15.43■□□□□ 0.06
CDK7-208ENST00000512687 VPS33BQ9H267 617 aa15.43■□□□□ 0.06
CDK7-208ENST00000512687 YDJCA8MPS7 323 aa15.42■□□□□ 0.06
CDK7-208ENST00000512687 NEURL1BA8MQ27 555 aa15.42■□□□□ 0.06
CDK7-208ENST00000512687 EPS15P42566 896 aa15.42■□□□□ 0.06
CDK7-208ENST00000512687 GPR101Q96P66 508 aaPredicted RBP15.42■□□□□ 0.06
CDK7-208ENST00000512687 PCNTO95613 3336 aa15.42■□□□□ 0.06
CDK7-208ENST00000512687 PASKQ96RG2 1323 aa15.42■□□□□ 0.06
CDK7-208ENST00000512687 RPS8P62241 208 aaKnown RBP15.41■□□□□ 0.06
CDK7-208ENST00000512687 CXCL9Q07325 125 aa15.41■□□□□ 0.06
CDK7-208ENST00000512687 POLLQ9UGP5 575 aa15.41■□□□□ 0.06
CDK7-208ENST00000512687 ZNRF3Q9ULT6 936 aa15.41■□□□□ 0.06
CDK7-208ENST00000512687 CTSWP56202 376 aa15.4■□□□□ 0.06
CDK7-208ENST00000512687 FKBP5Q13451 457 aaPredicted RBP15.4■□□□□ 0.06
CDK7-208ENST00000512687 CCDC152Q4G0S7 254 aa15.4■□□□□ 0.06
CDK7-208ENST00000512687 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
CDK7-208ENST00000512687 ITGBL1O95965 494 aaPredicted RBP15.39■□□□□ 0.05
CDK7-208ENST00000512687 NEXNQ0ZGT2 675 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms