RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 H7C1W4 665 aa9.4□□□□□ -0.9
NR1I3-231ENST00000512340 PPEF1O14829 653 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-231ENST00000512340 C21orf2O43822 256 aa9.4□□□□□ -0.9
NR1I3-231ENST00000512340 GRAPQ13588 217 aa9.4□□□□□ -0.9
NR1I3-231ENST00000512340 BEND3Q5T5X7 828 aa9.4□□□□□ -0.9
NR1I3-231ENST00000512340 ZKSCAN2Q63HK3 967 aa9.4□□□□□ -0.9
NR1I3-231ENST00000512340 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-231ENST00000512340 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-231ENST00000512340 TAOK3Q9H2K8 898 aa9.4□□□□□ -0.9
NR1I3-231ENST00000512340 CHMP4BQ9H444 224 aaKnown RBP9.4□□□□□ -0.9
NR1I3-231ENST00000512340 ZNF219Q9P2Y4 722 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-231ENST00000512340 NOB1Q9ULX3 412 aaKnown RBP9.4□□□□□ -0.9
NR1I3-231ENST00000512340 GRM8O00222 908 aa9.39□□□□□ -0.91
NR1I3-231ENST00000512340 KIF3CO14782 793 aa9.39□□□□□ -0.91
NR1I3-231ENST00000512340 IGKV5-2P06315 115 aa9.39□□□□□ -0.91
NR1I3-231ENST00000512340 LMNB1P20700 586 aa9.39□□□□□ -0.91
NR1I3-231ENST00000512340 IGHMBP2P38935 993 aaKnown RBP9.39□□□□□ -0.91
NR1I3-231ENST00000512340 CWF19L2Q2TBE0 894 aaKnown RBP9.39□□□□□ -0.91
NR1I3-231ENST00000512340 TAF7LQ5H9L4 462 aa9.39□□□□□ -0.91
NR1I3-231ENST00000512340 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
NR1I3-231ENST00000512340 VPS33BQ9H267 617 aa9.39□□□□□ -0.91
NR1I3-231ENST00000512340 LTBP3Q9NS15 1303 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
NR1I3-231ENST00000512340 GNAI3P08754 354 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 CTSWP56202 376 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 RPS8P62241 208 aaKnown RBP9.38□□□□□ -0.91
NR1I3-231ENST00000512340 IFIT5Q13325 482 aaKnown RBP9.38□□□□□ -0.91
NR1I3-231ENST00000512340 CCDC57Q2TAC2 916 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 ATF7IPQ6VMQ6 1270 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 SP8Q8IXZ3 490 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 ZNF526Q8TF50 670 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-231ENST00000512340 JDP2Q8WYK2 163 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 MPHOSPH8Q99549 860 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 PLA2G12BQ9BX93 195 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 CHMP3Q9Y3E7 222 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 ATP6V0A2Q9Y487 856 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 ARFGEF1Q9Y6D6 1849 aa9.38□□□□□ -0.91
NR1I3-231ENST00000512340 DLEC1Q9Y238 1755 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 ANKRD31Q8N7Z5 1873 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 ANKRD18BA2A2Z9 1011 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 G3V3G9 751 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 UBTFL1P0CB47 393 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-231ENST00000512340 FKBP4Q02790 459 aaKnown RBP eCLIP9.37□□□□□ -0.91
NR1I3-231ENST00000512340 DCAF8Q5TAQ9 597 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 DPY19L2Q6NUT2 758 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 DPP8Q6V1X1 898 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-231ENST00000512340 MPNDQ8N594 471 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 YTHDC1Q96MU7 727 aaKnown RBP9.37□□□□□ -0.91
NR1I3-231ENST00000512340 PSMD1Q99460 953 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 EYA3Q99504 573 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 RNF181Q9P0P0 153 aa9.37□□□□□ -0.91
NR1I3-231ENST00000512340 ABCC4O15439 1325 aa9.36□□□□□ -0.91
NR1I3-231ENST00000512340 KDM2BQ8NHM5 1336 aa9.36□□□□□ -0.91
NR1I3-231ENST00000512340 FSTL1Q12841 308 aa9.36□□□□□ -0.91
NR1I3-231ENST00000512340 C9orf131Q5VYM1 1079 aa9.36□□□□□ -0.91
NR1I3-231ENST00000512340 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
NR1I3-231ENST00000512340 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
NR1I3-231ENST00000512340 RCAN3Q9UKA8 241 aa9.36□□□□□ -0.91
NR1I3-231ENST00000512340 BRCA1P38398 1863 aaKnown RBP9.36□□□□□ -0.91
NR1I3-231ENST00000512340 RTL9Q8NET4 1388 aa9.36□□□□□ -0.91
NR1I3-231ENST00000512340 BCAR3O75815 825 aa9.35□□□□□ -0.91
NR1I3-231ENST00000512340 C16orf71Q8IYS4 520 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-231ENST00000512340 DZIP1LQ8IYY4 767 aaKnown RBP9.35□□□□□ -0.91
NR1I3-231ENST00000512340 DNAJC5GQ8N7S2 189 aa9.35□□□□□ -0.91
NR1I3-231ENST00000512340 TTLL11Q8NHH1 800 aa9.35□□□□□ -0.91
NR1I3-231ENST00000512340 C7orf43Q8WVR3 580 aa9.35□□□□□ -0.91
NR1I3-231ENST00000512340 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-231ENST00000512340 ANKRD2Q9GZV1 360 aa9.35□□□□□ -0.91
NR1I3-231ENST00000512340 ANKIB1Q9P2G1 1089 aa9.35□□□□□ -0.91
NR1I3-231ENST00000512340 KIAA1551Q9HCM1 1747 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 C6orf229H3BNL8 230 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 CSF1RP07333 972 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 ITGA6P23229 1130 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 IARSP41252 1262 aaKnown RBP9.34□□□□□ -0.91
NR1I3-231ENST00000512340 KCNJ4P48050 445 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 EIF6P56537 245 aaKnown RBP9.34□□□□□ -0.91
NR1I3-231ENST00000512340 INTS3Q68E01 1043 aaKnown RBP9.34□□□□□ -0.91
NR1I3-231ENST00000512340 LMBR1LQ6UX01 489 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 C3orf67Q6ZVT6 689 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 JMYQ8N9B5 988 aa9.34□□□□□ -0.91
NR1I3-231ENST00000512340 BSDC1Q9NW68 430 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-231ENST00000512340 NSFL1CQ9UNZ2 370 aaKnown RBP9.34□□□□□ -0.91
NR1I3-231ENST00000512340 UTYO14607 1347 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 XDHP47989 1333 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 SLX4Q8IY92 1834 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 PPIP5K2O43314 1243 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 ATP2B4P23634 1241 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 ITPRIPQ8IWB1 547 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 NIM1KQ8IY84 436 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 CCDC85AQ96PX6 553 aaPredicted RBP9.33□□□□□ -0.92
NR1I3-231ENST00000512340 ZC3H12CQ9C0D7 883 aaKnown RBP9.33□□□□□ -0.92
NR1I3-231ENST00000512340 GREM2Q9H772 168 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 CNNM1Q9NRU3 951 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 COL11A2P13942 1736 aaPredicted RBP9.33□□□□□ -0.92
NR1I3-231ENST00000512340 WDR90Q96KV7 1748 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 MYH3P11055 1940 aa9.33□□□□□ -0.92
NR1I3-231ENST00000512340 LAMB2P55268 1798 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms