RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SCARF2Q96GP6 870 aaPredicted RBP9.71□□□□□ -0.86
GYPB-212ENST00000511198 KIAA0556O60303 1618 aa9.71□□□□□ -0.86
GYPB-212ENST00000511198 ABCA9Q8IUA7 1624 aa9.71□□□□□ -0.86
GYPB-212ENST00000511198 LAMC2Q13753 1193 aa9.7□□□□□ -0.86
GYPB-212ENST00000511198 SLCO4C1Q6ZQN7 724 aa9.7□□□□□ -0.86
GYPB-212ENST00000511198 EDARADDQ8WWZ3 215 aa9.7□□□□□ -0.86
GYPB-212ENST00000511198 KLF15Q9UIH9 416 aa9.7□□□□□ -0.86
GYPB-212ENST00000511198 FHOD3Q2V2M9 1422 aa9.7□□□□□ -0.86
GYPB-212ENST00000511198 DENND4BO75064 1496 aaPredicted RBP9.69□□□□□ -0.86
GYPB-212ENST00000511198 IGFBP4P22692 258 aa9.69□□□□□ -0.86
GYPB-212ENST00000511198 IRS1P35568 1242 aa9.69□□□□□ -0.86
GYPB-212ENST00000511198 IQGAP2Q13576 1575 aa9.69□□□□□ -0.86
GYPB-212ENST00000511198 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
GYPB-212ENST00000511198 CNTNAP5Q8WYK1 1306 aa9.69□□□□□ -0.86
GYPB-212ENST00000511198 HSH2DQ96JZ2 352 aa9.69□□□□□ -0.86
GYPB-212ENST00000511198 NEUROD4Q9HD90 331 aa9.69□□□□□ -0.86
GYPB-212ENST00000511198 MARK1Q9P0L2 795 aa9.69□□□□□ -0.86
GYPB-212ENST00000511198 DNMT3AQ9Y6K1 912 aaPredicted RBP9.69□□□□□ -0.86
GYPB-212ENST00000511198 ZFYVE16Q7Z3T8 1539 aa9.68□□□□□ -0.86
GYPB-212ENST00000511198 WEE1P30291 646 aa9.68□□□□□ -0.86
GYPB-212ENST00000511198 FAM200AQ8TCP9 573 aa9.68□□□□□ -0.86
GYPB-212ENST00000511198 SUSD3Q96L08 255 aa9.68□□□□□ -0.86
GYPB-212ENST00000511198 NEURL1BA8MQ27 555 aa9.67□□□□□ -0.86
GYPB-212ENST00000511198 EPXP11678 715 aa9.67□□□□□ -0.86
GYPB-212ENST00000511198 SFSWAPQ12872 951 aaKnown RBP9.67□□□□□ -0.86
GYPB-212ENST00000511198 GRIN2CQ14957 1233 aa9.67□□□□□ -0.86
GYPB-212ENST00000511198 AVENQ9NQS1 362 aaPredicted RBP9.67□□□□□ -0.86
GYPB-212ENST00000511198 ANKIB1Q9P2G1 1089 aa9.67□□□□□ -0.86
GYPB-212ENST00000511198 NOVA2Q9UNW9 492 aaKnown RBP9.67□□□□□ -0.86
GYPB-212ENST00000511198 TRAPPC8Q9Y2L5 1435 aa9.66□□□□□ -0.86
GYPB-212ENST00000511198 GDF11O95390 407 aa9.66□□□□□ -0.86
GYPB-212ENST00000511198 HOXB4P17483 251 aaPredicted RBP9.66□□□□□ -0.86
GYPB-212ENST00000511198 SNRPNP63162 240 aaKnown RBP9.66□□□□□ -0.86
GYPB-212ENST00000511198 ZNF468Q5VIY5 522 aaPredicted RBP9.66□□□□□ -0.86
GYPB-212ENST00000511198 FCHSD1Q86WN1 690 aa9.66□□□□□ -0.86
GYPB-212ENST00000511198 TMEM151AQ8N4L1 468 aa9.66□□□□□ -0.86
GYPB-212ENST00000511198 ZMIZ1Q9ULJ6 1067 aa9.66□□□□□ -0.86
GYPB-212ENST00000511198 C3P01024 1663 aa9.66□□□□□ -0.86
GYPB-212ENST00000511198 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
GYPB-212ENST00000511198 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.65□□□□□ -0.86
GYPB-212ENST00000511198 ELOAQ14241 798 aaKnown RBP9.65□□□□□ -0.86
GYPB-212ENST00000511198 KANK3Q6NY19 840 aa9.65□□□□□ -0.86
GYPB-212ENST00000511198 BEND7Q8N7W2 519 aaPredicted RBP9.65□□□□□ -0.86
GYPB-212ENST00000511198 NGLY1Q96IV0 654 aa9.65□□□□□ -0.86
GYPB-212ENST00000511198 PTPRKQ15262 1439 aa9.65□□□□□ -0.87
GYPB-212ENST00000511198 ABCA8O94911 1581 aa9.64□□□□□ -0.87
GYPB-212ENST00000511198 ADH6P28332 368 aa9.64□□□□□ -0.87
GYPB-212ENST00000511198 PCBP4P57723 403 aaKnown RBP9.64□□□□□ -0.87
GYPB-212ENST00000511198 TYRO3Q06418 890 aa9.64□□□□□ -0.87
GYPB-212ENST00000511198 CEP63Q96MT8 703 aa9.64□□□□□ -0.87
GYPB-212ENST00000511198 EFCAB5A4FU69 1503 aa9.64□□□□□ -0.87
GYPB-212ENST00000511198 ARID3CA6NKF2 412 aa9.63□□□□□ -0.87
GYPB-212ENST00000511198 KCNQ4P56696 695 aa9.63□□□□□ -0.87
GYPB-212ENST00000511198 RTN1Q16799 776 aa9.63□□□□□ -0.87
GYPB-212ENST00000511198 BTBD6Q96KE9 485 aa9.63□□□□□ -0.87
GYPB-212ENST00000511198 SLC30A3Q99726 388 aa9.63□□□□□ -0.87
GYPB-212ENST00000511198 BRD7Q9NPI1 651 aa9.63□□□□□ -0.87
GYPB-212ENST00000511198 PRR12Q9ULL5 1215 aa9.63□□□□□ -0.87
GYPB-212ENST00000511198 UGGT2Q9NYU1 1516 aa9.62□□□□□ -0.87
GYPB-212ENST00000511198 MAGI2Q86UL8 1455 aa9.62□□□□□ -0.87
GYPB-212ENST00000511198 PHF20L1A8MW92 1017 aa9.62□□□□□ -0.87
GYPB-212ENST00000511198 FOXO3O43524 673 aa9.62□□□□□ -0.87
GYPB-212ENST00000511198 PODNQ7Z5L7 613 aa9.62□□□□□ -0.87
GYPB-212ENST00000511198 BCS1LQ9Y276 419 aa9.62□□□□□ -0.87
GYPB-212ENST00000511198 HECW1Q76N89 1606 aa9.62□□□□□ -0.87
GYPB-212ENST00000511198 ACIN1Q9UKV3 1341 aaKnown RBP9.61□□□□□ -0.87
GYPB-212ENST00000511198 ATP10AO60312 1499 aa9.61□□□□□ -0.87
GYPB-212ENST00000511198 TCOF1Q13428 1488 aaKnown RBP9.61□□□□□ -0.87
GYPB-212ENST00000511198 BTLAQ7Z6A9 289 aa9.61□□□□□ -0.87
GYPB-212ENST00000511198 SYT9Q86SS6 491 aa9.61□□□□□ -0.87
GYPB-212ENST00000511198 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
GYPB-212ENST00000511198 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
GYPB-212ENST00000511198 MDFIQ99750 246 aa9.61□□□□□ -0.87
GYPB-212ENST00000511198 QTRT2Q9H974 415 aaKnown RBP9.61□□□□□ -0.87
GYPB-212ENST00000511198 DMGDHQ9UI17 866 aaKnown RBP9.61□□□□□ -0.87
GYPB-212ENST00000511198 CPS1P31327 1500 aa9.61□□□□□ -0.87
GYPB-212ENST00000511198 SETBP1Q9Y6X0 1596 aa9.6□□□□□ -0.87
GYPB-212ENST00000511198 ATG7O95352 703 aa9.6□□□□□ -0.87
GYPB-212ENST00000511198 HIF1AQ16665 826 aa9.6□□□□□ -0.87
GYPB-212ENST00000511198 SWI5Q1ZZU3 235 aa9.6□□□□□ -0.87
GYPB-212ENST00000511198 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
GYPB-212ENST00000511198 SERPINA10Q9UK55 444 aa9.6□□□□□ -0.87
GYPB-212ENST00000511198 SHANK2Q9UPX8 1470 aa9.59□□□□□ -0.87
GYPB-212ENST00000511198 AMPD1P23109 780 aa9.59□□□□□ -0.87
GYPB-212ENST00000511198 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
GYPB-212ENST00000511198 IER5Q5VY09 327 aa9.59□□□□□ -0.87
GYPB-212ENST00000511198 CCDC97Q96F63 343 aaPredicted RBP9.59□□□□□ -0.87
GYPB-212ENST00000511198 RRAGCQ9HB90 399 aa9.59□□□□□ -0.87
GYPB-212ENST00000511198 KCNH4Q9UQ05 1017 aa9.59□□□□□ -0.87
GYPB-212ENST00000511198 ATP10BO94823 1461 aa9.59□□□□□ -0.87
GYPB-212ENST00000511198 SIN3BO75182 1162 aa9.58□□□□□ -0.88
GYPB-212ENST00000511198 DGKGP49619 791 aa9.58□□□□□ -0.88
GYPB-212ENST00000511198 OCLNQ16625 522 aa9.58□□□□□ -0.88
GYPB-212ENST00000511198 CHSY3Q70JA7 882 aa9.58□□□□□ -0.88
GYPB-212ENST00000511198 PRIMPOLQ96LW4 560 aa9.58□□□□□ -0.88
GYPB-212ENST00000511198 KLK14Q9P0G3 267 aa9.58□□□□□ -0.88
GYPB-212ENST00000511198 MKL2Q9ULH7 1088 aa9.58□□□□□ -0.88
GYPB-212ENST00000511198 RAPGEF2Q9Y4G8 1499 aa9.58□□□□□ -0.88
GYPB-212ENST00000511198 C9orf84Q5VXU9 1444 aa9.57□□□□□ -0.88
GYPB-212ENST00000511198 TGFBR3LH3BV60 316 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms