RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 MAP3K2Q9Y2U5 619 aa29.53■■■□□ 2.32
SNF8-209ENST00000510558 PPIP5K2O43314 1243 aa29.52■■■□□ 2.32
SNF8-209ENST00000510558 EIF6P56537 245 aaKnown RBP29.52■■■□□ 2.32
SNF8-209ENST00000510558 KSR2Q6VAB6 950 aa29.52■■■□□ 2.32
SNF8-209ENST00000510558 TMC4Q7Z404 712 aa29.52■■■□□ 2.32
SNF8-209ENST00000510558 GPC2Q8N158 579 aa29.52■■■□□ 2.32
SNF8-209ENST00000510558 SUPT20HQ8NEM7 779 aa29.52■■■□□ 2.32
SNF8-209ENST00000510558 RTFDC1Q9BY42 306 aaPredicted RBP29.52■■■□□ 2.32
SNF8-209ENST00000510558 TAF1DQ9H5J8 278 aaPredicted RBP29.52■■■□□ 2.32
SNF8-209ENST00000510558 CWC25Q9NXE8 425 aaPredicted RBP29.52■■■□□ 2.32
SNF8-209ENST00000510558 COL4A1P02462 1669 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 PI4KAP2A4QPH2 592 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 POTEIP0CG38 1075 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 POTEJP0CG39 1038 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 HTRA3P83110 453 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 AOC3Q16853 763 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 DPP8Q6V1X1 898 aaPredicted RBP29.51■■■□□ 2.31
SNF8-209ENST00000510558 MPNDQ8N594 471 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 PI4KAP1Q8N8J0 262 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 VPS33BQ9H267 617 aa29.51■■■□□ 2.31
SNF8-209ENST00000510558 PCCAP05165 728 aaPredicted RBP29.5■■■□□ 2.31
SNF8-209ENST00000510558 NIM1KQ8IY84 436 aa29.5■■■□□ 2.31
SNF8-209ENST00000510558 DNAJC5GQ8N7S2 189 aa29.5■■■□□ 2.31
SNF8-209ENST00000510558 SLC4A2P04920 1241 aa29.49■■■□□ 2.31
SNF8-209ENST00000510558 HSP90B1P14625 803 aaKnown RBP29.49■■■□□ 2.31
SNF8-209ENST00000510558 CHADLQ6NUI6 762 aa29.49■■■□□ 2.31
SNF8-209ENST00000510558 G2E3Q7L622 706 aa29.49■■■□□ 2.31
SNF8-209ENST00000510558 CELF1Q92879 486 aaKnown RBP29.49■■■□□ 2.31
SNF8-209ENST00000510558 HACL1Q9UJ83 578 aa29.49■■■□□ 2.31
SNF8-209ENST00000510558 DUOX1Q9NRD9 1551 aa29.48■■■□□ 2.31
SNF8-209ENST00000510558 GJA3Q9Y6H8 435 aa29.48■■■□□ 2.31
SNF8-209ENST00000510558 EPHX2P34913 555 aa29.46■■■□□ 2.31
SNF8-209ENST00000510558 EXOSC9Q06265 439 aaKnown RBP29.46■■■□□ 2.31
SNF8-209ENST00000510558 LDHDQ86WU2 507 aa29.46■■■□□ 2.31
SNF8-209ENST00000510558 JARID2Q92833 1246 aaPredicted RBP29.46■■■□□ 2.31
SNF8-209ENST00000510558 SPINK5Q9NQ38 1064 aaPredicted RBP29.46■■■□□ 2.31
SNF8-209ENST00000510558 VAMP4O75379 141 aa29.45■■■□□ 2.31
SNF8-209ENST00000510558 IGKV5-2P06315 115 aa29.45■■■□□ 2.31
SNF8-209ENST00000510558 NEXNQ0ZGT2 675 aa29.45■■■□□ 2.31
SNF8-209ENST00000510558 ADAMTSL1Q8N6G6 1762 aa29.44■■■□□ 2.3
SNF8-209ENST00000510558 MYH3P11055 1940 aa29.44■■■□□ 2.3
SNF8-209ENST00000510558 PDE8AO60658 829 aa29.44■■■□□ 2.3
SNF8-209ENST00000510558 KIAA2012Q0VF49 1180 aa29.44■■■□□ 2.3
SNF8-209ENST00000510558 EAPPQ56P03 285 aaPredicted RBP29.44■■■□□ 2.3
SNF8-209ENST00000510558 LTBP1Q14766 1721 aa29.44■■■□□ 2.3
SNF8-209ENST00000510558 FLIIQ13045 1269 aa29.43■■■□□ 2.3
SNF8-209ENST00000510558 MYH16Q9H6N6 1097 aa29.43■■■□□ 2.3
SNF8-209ENST00000510558 CDHR2Q9BYE9 1310 aa29.43■■■□□ 2.3
SNF8-209ENST00000510558 RPS8P62241 208 aaKnown RBP29.42■■■□□ 2.3
SNF8-209ENST00000510558 CCDC152Q4G0S7 254 aa29.42■■■□□ 2.3
SNF8-209ENST00000510558 ZNRF3Q9ULT6 936 aa29.42■■■□□ 2.3
SNF8-209ENST00000510558 CWF19L2Q2TBE0 894 aaKnown RBP29.41■■■□□ 2.3
SNF8-209ENST00000510558 KLRG1Q96E93 195 aa29.41■■■□□ 2.3
SNF8-209ENST00000510558 SEC31BQ9NQW1 1179 aa29.41■■■□□ 2.3
SNF8-209ENST00000510558 NSFL1CQ9UNZ2 370 aaKnown RBP29.41■■■□□ 2.3
SNF8-209ENST00000510558 NEURL1BA8MQ27 555 aa29.4■■■□□ 2.3
SNF8-209ENST00000510558 LMOD1P29536 600 aaPredicted RBP29.4■■■□□ 2.3
SNF8-209ENST00000510558 PNMA8AQ86V59 439 aaPredicted RBP29.4■■■□□ 2.3
SNF8-209ENST00000510558 SCNN1DP51172 638 aa29.39■■■□□ 2.3
SNF8-209ENST00000510558 FKBP5Q13451 457 aaPredicted RBP29.39■■■□□ 2.3
SNF8-209ENST00000510558 GPSM2P81274 684 aa29.38■■■□□ 2.29
SNF8-209ENST00000510558 CXCL9Q07325 125 aa29.38■■■□□ 2.29
SNF8-209ENST00000510558 CCDC85AQ96PX6 553 aaPredicted RBP29.38■■■□□ 2.29
SNF8-209ENST00000510558 CLEC11AQ9Y240 323 aa29.38■■■□□ 2.29
SNF8-209ENST00000510558 ZNF521Q96K83 1311 aa29.37■■■□□ 2.29
SNF8-209ENST00000510558 EPS15P42566 896 aa29.36■■■□□ 2.29
SNF8-209ENST00000510558 DNAAF4Q8WXU2 420 aa29.36■■■□□ 2.29
SNF8-209ENST00000510558 C6orf229H3BNL8 230 aa29.35■■■□□ 2.29
SNF8-209ENST00000510558 CTSWP56202 376 aa29.35■■■□□ 2.29
SNF8-209ENST00000510558 WASHC4Q2M389 1173 aa29.35■■■□□ 2.29
SNF8-209ENST00000510558 POLLQ9UGP5 575 aa29.35■■■□□ 2.29
SNF8-209ENST00000510558 SPEF2Q9C093 1822 aa29.34■■■□□ 2.29
SNF8-209ENST00000510558 CIAPIN1Q6FI81 312 aa29.34■■■□□ 2.29
SNF8-209ENST00000510558 UBE3BQ7Z3V4 1068 aa29.34■■■□□ 2.29
SNF8-209ENST00000510558 PASKQ96RG2 1323 aa29.34■■■□□ 2.29
SNF8-209ENST00000510558 YDJCA8MPS7 323 aa29.33■■■□□ 2.29
SNF8-209ENST00000510558 H7C1W4 665 aa29.33■■■□□ 2.29
SNF8-209ENST00000510558 RAD17O75943 681 aa29.33■■■□□ 2.29
SNF8-209ENST00000510558 ITGBL1O95965 494 aaPredicted RBP29.32■■■□□ 2.28
SNF8-209ENST00000510558 GCKRQ14397 625 aa29.32■■■□□ 2.28
SNF8-209ENST00000510558 ANKRD18AQ8IVF6 992 aa29.32■■■□□ 2.28
SNF8-209ENST00000510558 TBC1D16Q8TBP0 767 aa29.32■■■□□ 2.28
SNF8-209ENST00000510558 EYA3Q99504 573 aa29.32■■■□□ 2.28
SNF8-209ENST00000510558 PODXL2Q9NZ53 605 aa29.32■■■□□ 2.28
SNF8-209ENST00000510558 GPRC5DQ9NZD1 345 aa29.32■■■□□ 2.28
SNF8-209ENST00000510558 RIMBP2O15034 1052 aa29.31■■■□□ 2.28
SNF8-209ENST00000510558 TNIP1Q15025 636 aa29.31■■■□□ 2.28
SNF8-209ENST00000510558 JMYQ8N9B5 988 aa29.31■■■□□ 2.28
SNF8-209ENST00000510558 LINS1Q8NG48 757 aa29.31■■■□□ 2.28
SNF8-209ENST00000510558 TTLL11Q8NHH1 800 aa29.31■■■□□ 2.28
SNF8-209ENST00000510558 CREBZFQ9NS37 354 aa29.31■■■□□ 2.28
SNF8-209ENST00000510558 GMPSP49915 693 aaPredicted RBP29.3■■■□□ 2.28
SNF8-209ENST00000510558 MAP1SQ66K74 1059 aaPredicted RBP29.3■■■□□ 2.28
SNF8-209ENST00000510558 GPR101Q96P66 508 aaPredicted RBP29.3■■■□□ 2.28
SNF8-209ENST00000510558 CDC5LQ99459 802 aaKnown RBP29.3■■■□□ 2.28
SNF8-209ENST00000510558 DBNDD1Q9H9R9 158 aa29.3■■■□□ 2.28
SNF8-209ENST00000510558 RTL9Q8NET4 1388 aa29.29■■■□□ 2.28
SNF8-209ENST00000510558 USP50Q70EL3 339 aaPredicted RBP29.29■■■□□ 2.28
SNF8-209ENST00000510558 CNTROBQ8N137 903 aa29.29■■■□□ 2.28
SNF8-209ENST00000510558 GREM2Q9H772 168 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms