RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 CASP8AP2Q9UKL3 1982 aa17.57■□□□□ 0.4
DDX41-210ENST00000509576 PSME4Q14997 1843 aa17.56■□□□□ 0.4
DDX41-210ENST00000509576 LMOD1P29536 600 aaPredicted RBP17.56■□□□□ 0.4
DDX41-210ENST00000509576 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
DDX41-210ENST00000509576 RALBP1Q15311 655 aa17.56■□□□□ 0.4
DDX41-210ENST00000509576 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
DDX41-210ENST00000509576 ISCA1Q9BUE6 129 aa17.56■□□□□ 0.4
DDX41-210ENST00000509576 GLIS2Q9BZE0 524 aaPredicted RBP17.56■□□□□ 0.4
DDX41-210ENST00000509576 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
DDX41-210ENST00000509576 ZNRF3Q9ULT6 936 aa17.56■□□□□ 0.4
DDX41-210ENST00000509576 ABT1Q9ULW3 272 aaKnown RBP17.56■□□□□ 0.4
DDX41-210ENST00000509576 RAD17O75943 681 aa17.55■□□□□ 0.4
DDX41-210ENST00000509576 CELF1Q92879 486 aaKnown RBP17.55■□□□□ 0.4
DDX41-210ENST00000509576 TRMT112Q9UI30 125 aaKnown RBP17.55■□□□□ 0.4
DDX41-210ENST00000509576 SH3TC1Q8TE82 1336 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
DDX41-210ENST00000509576 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 AOC2O75106 756 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 BBOX1O75936 387 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 EGFRP00533 1210 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
DDX41-210ENST00000509576 GRAPQ13588 217 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
DDX41-210ENST00000509576 MPNDQ8N594 471 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
DDX41-210ENST00000509576 CAPNS2Q96L46 248 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 ADARB2Q9NS39 739 aaKnown RBP17.54■□□□□ 0.4
DDX41-210ENST00000509576 PGAP2Q9UHJ9 254 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 TLL2Q9Y6L7 1015 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
DDX41-210ENST00000509576 FAM89AQ96GI7 184 aa17.53■□□□□ 0.4
DDX41-210ENST00000509576 GPR101Q96P66 508 aaPredicted RBP17.53■□□□□ 0.4
DDX41-210ENST00000509576 VPS33BQ9H267 617 aa17.53■□□□□ 0.4
DDX41-210ENST00000509576 KCNQ5Q9NR82 932 aa17.53■□□□□ 0.4
DDX41-210ENST00000509576 ADAMTS8Q9UP79 889 aa17.53■□□□□ 0.4
DDX41-210ENST00000509576 HSP90AB3PQ58FF7 597 aa17.52■□□□□ 0.4
DDX41-210ENST00000509576 CIAPIN1Q6FI81 312 aa17.52■□□□□ 0.4
DDX41-210ENST00000509576 TSKSQ9UJT2 592 aa17.52■□□□□ 0.4
DDX41-210ENST00000509576 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
DDX41-210ENST00000509576 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
DDX41-210ENST00000509576 RTL9Q8NET4 1388 aa17.52■□□□□ 0.39
DDX41-210ENST00000509576 LMOD3Q0VAK6 560 aa17.51■□□□□ 0.39
DDX41-210ENST00000509576 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
DDX41-210ENST00000509576 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
DDX41-210ENST00000509576 SAPCD2Q86UD0 394 aa17.51■□□□□ 0.39
DDX41-210ENST00000509576 PLBD2Q8NHP8 589 aa17.51■□□□□ 0.39
DDX41-210ENST00000509576 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
DDX41-210ENST00000509576 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
DDX41-210ENST00000509576 ZIC5Q96T25 663 aa17.51■□□□□ 0.39
DDX41-210ENST00000509576 POLLQ9UGP5 575 aa17.51■□□□□ 0.39
DDX41-210ENST00000509576 ZNF853P0CG23 659 aa17.5■□□□□ 0.39
DDX41-210ENST00000509576 GRM1Q13255 1194 aa17.5■□□□□ 0.39
DDX41-210ENST00000509576 SF3B3Q15393 1217 aaKnown RBP17.5■□□□□ 0.39
DDX41-210ENST00000509576 DDX46Q7L014 1031 aaKnown RBP17.5■□□□□ 0.39
DDX41-210ENST00000509576 MBIPQ9NS73 344 aa17.5■□□□□ 0.39
DDX41-210ENST00000509576 CELF2O95319 508 aaKnown RBP17.49■□□□□ 0.39
DDX41-210ENST00000509576 GPSM2P81274 684 aa17.49■□□□□ 0.39
DDX41-210ENST00000509576 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
DDX41-210ENST00000509576 ANKRD13DQ6ZTN6 518 aa17.49■□□□□ 0.39
DDX41-210ENST00000509576 SUPT20HQ8NEM7 779 aa17.49■□□□□ 0.39
DDX41-210ENST00000509576 DBNDD1Q9H9R9 158 aa17.49■□□□□ 0.39
DDX41-210ENST00000509576 MYH3P11055 1940 aa17.49■□□□□ 0.39
DDX41-210ENST00000509576 PSMD14O00487 310 aa17.48■□□□□ 0.39
DDX41-210ENST00000509576 MAP2K1Q02750 393 aaPredicted RBP17.48■□□□□ 0.39
DDX41-210ENST00000509576 SAMD7Q7Z3H4 446 aa17.48■□□□□ 0.39
DDX41-210ENST00000509576 ABHD8Q96I13 439 aa17.48■□□□□ 0.39
DDX41-210ENST00000509576 PHAXQ9H814 394 aaKnown RBP17.48■□□□□ 0.39
DDX41-210ENST00000509576 CNOT7Q9UIV1 285 aaKnown RBP17.48■□□□□ 0.39
DDX41-210ENST00000509576 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
DDX41-210ENST00000509576 HOXB7P09629 217 aa17.47■□□□□ 0.39
DDX41-210ENST00000509576 PAXIP1Q6ZW49 1069 aaPredicted RBP17.47■□□□□ 0.39
DDX41-210ENST00000509576 MICALL2Q8IY33 904 aa17.47■□□□□ 0.39
DDX41-210ENST00000509576 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
DDX41-210ENST00000509576 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
DDX41-210ENST00000509576 WTIPA6NIX2 430 aaPredicted RBP17.46■□□□□ 0.39
DDX41-210ENST00000509576 RIMBP2O15034 1052 aa17.46■□□□□ 0.39
DDX41-210ENST00000509576 JARID2Q92833 1246 aaPredicted RBP17.46■□□□□ 0.39
DDX41-210ENST00000509576 DBF4Q9UBU7 674 aaPredicted RBP17.46■□□□□ 0.39
DDX41-210ENST00000509576 ASTN2O75129 1339 aaPredicted RBP17.46■□□□□ 0.38
DDX41-210ENST00000509576 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
DDX41-210ENST00000509576 DOK7Q18PE1 504 aa17.45■□□□□ 0.38
DDX41-210ENST00000509576 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
DDX41-210ENST00000509576 NSFL1CQ9UNZ2 370 aaKnown RBP17.45■□□□□ 0.38
DDX41-210ENST00000509576 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
DDX41-210ENST00000509576 ECE1P42892 770 aa17.44■□□□□ 0.38
DDX41-210ENST00000509576 TBC1D10BQ4KMP7 808 aaPredicted RBP17.44■□□□□ 0.38
DDX41-210ENST00000509576 USP48Q86UV5 1035 aa17.44■□□□□ 0.38
DDX41-210ENST00000509576 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
DDX41-210ENST00000509576 TBC1D16Q8TBP0 767 aa17.44■□□□□ 0.38
DDX41-210ENST00000509576 ZC3H15Q8WU90 426 aaKnown RBP17.44■□□□□ 0.38
DDX41-210ENST00000509576 ZNF408Q9H9D4 720 aa17.44■□□□□ 0.38
DDX41-210ENST00000509576 TNRC18O15417 2968 aaPredicted RBP17.43■□□□□ 0.38
DDX41-210ENST00000509576 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
DDX41-210ENST00000509576 ECE2O60344 883 aa17.43■□□□□ 0.38
DDX41-210ENST00000509576 TNIP1Q15025 636 aa17.43■□□□□ 0.38
DDX41-210ENST00000509576 WASHC4Q2M389 1173 aa17.43■□□□□ 0.38
DDX41-210ENST00000509576 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
DDX41-210ENST00000509576 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
DDX41-210ENST00000509576 HYPKQ9NX55 129 aa17.43■□□□□ 0.38
DDX41-210ENST00000509576 ADM5C9JUS6 153 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms