RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 ZBTB38Q8NAP3 1195 aaPredicted RBP29.61■■■□□ 2.33
RETREG1-204ENST00000509048 SUPT20HQ8NEM7 779 aa29.61■■■□□ 2.33
RETREG1-204ENST00000509048 KLRG1Q96E93 195 aa29.61■■■□□ 2.33
RETREG1-204ENST00000509048 MYD88Q99836 296 aa29.61■■■□□ 2.33
RETREG1-204ENST00000509048 IRS4O14654 1257 aaPredicted RBP29.6■■■□□ 2.33
RETREG1-204ENST00000509048 PPIP5K2O43314 1243 aa29.6■■■□□ 2.33
RETREG1-204ENST00000509048 RTL5Q5HYW3 569 aaPredicted RBP29.6■■■□□ 2.33
RETREG1-204ENST00000509048 DPP8Q6V1X1 898 aaPredicted RBP29.6■■■□□ 2.33
RETREG1-204ENST00000509048 LDHDQ86WU2 507 aa29.6■■■□□ 2.33
RETREG1-204ENST00000509048 CCDC191Q8NCU4 936 aa29.6■■■□□ 2.33
RETREG1-204ENST00000509048 LRRC37AA6NMS7 1700 aa29.59■■■□□ 2.33
RETREG1-204ENST00000509048 AOC3Q16853 763 aa29.59■■■□□ 2.33
RETREG1-204ENST00000509048 TWISTNBQ3B726 338 aaPredicted RBP29.59■■■□□ 2.33
RETREG1-204ENST00000509048 MPNDQ8N594 471 aa29.59■■■□□ 2.33
RETREG1-204ENST00000509048 METTL22Q9BUU2 404 aaPredicted RBP29.59■■■□□ 2.33
RETREG1-204ENST00000509048 EPHX2P34913 555 aa29.58■■■□□ 2.33
RETREG1-204ENST00000509048 NIM1KQ8IY84 436 aa29.58■■■□□ 2.33
RETREG1-204ENST00000509048 STK31Q9BXU1 1019 aa29.57■■■□□ 2.32
RETREG1-204ENST00000509048 ADAMTSL1Q8N6G6 1762 aa29.57■■■□□ 2.32
RETREG1-204ENST00000509048 WDR63Q8IWG1 891 aa29.56■■■□□ 2.32
RETREG1-204ENST00000509048 CELF1Q92879 486 aaKnown RBP29.56■■■□□ 2.32
RETREG1-204ENST00000509048 GJA3Q9Y6H8 435 aa29.56■■■□□ 2.32
RETREG1-204ENST00000509048 FANCIQ9NVI1 1328 aa29.55■■■□□ 2.32
RETREG1-204ENST00000509048 PCCAP05165 728 aaPredicted RBP29.55■■■□□ 2.32
RETREG1-204ENST00000509048 HSP90B1P14625 803 aaKnown RBP29.55■■■□□ 2.32
RETREG1-204ENST00000509048 KSR2Q6VAB6 950 aa29.55■■■□□ 2.32
RETREG1-204ENST00000509048 PNMA8AQ86V59 439 aaPredicted RBP29.55■■■□□ 2.32
RETREG1-204ENST00000509048 JMYQ8N9B5 988 aa29.55■■■□□ 2.32
RETREG1-204ENST00000509048 CWC25Q9NXE8 425 aaPredicted RBP29.55■■■□□ 2.32
RETREG1-204ENST00000509048 MAP3K2Q9Y2U5 619 aa29.55■■■□□ 2.32
RETREG1-204ENST00000509048 DUOX1Q9NRD9 1551 aa29.55■■■□□ 2.32
RETREG1-204ENST00000509048 COL4A1P02462 1669 aa29.54■■■□□ 2.32
RETREG1-204ENST00000509048 KIAA2012Q0VF49 1180 aa29.54■■■□□ 2.32
RETREG1-204ENST00000509048 EAPPQ56P03 285 aaPredicted RBP29.54■■■□□ 2.32
RETREG1-204ENST00000509048 PI4KAP2A4QPH2 592 aa29.53■■■□□ 2.32
RETREG1-204ENST00000509048 SCNN1DP51172 638 aa29.53■■■□□ 2.32
RETREG1-204ENST00000509048 PI4KAP1Q8N8J0 262 aa29.53■■■□□ 2.32
RETREG1-204ENST00000509048 ZNRF3Q9ULT6 936 aa29.53■■■□□ 2.32
RETREG1-204ENST00000509048 LTBP1Q14766 1721 aa29.53■■■□□ 2.32
RETREG1-204ENST00000509048 SALL2Q9Y467 1007 aaPredicted RBP29.52■■■□□ 2.32
RETREG1-204ENST00000509048 PASKQ96RG2 1323 aa29.51■■■□□ 2.32
RETREG1-204ENST00000509048 SLC4A2P04920 1241 aa29.5■■■□□ 2.31
RETREG1-204ENST00000509048 IGKV5-2P06315 115 aa29.5■■■□□ 2.31
RETREG1-204ENST00000509048 G2E3Q7L622 706 aa29.5■■■□□ 2.31
RETREG1-204ENST00000509048 PDE8AO60658 829 aa29.49■■■□□ 2.31
RETREG1-204ENST00000509048 ITGBL1O95965 494 aaPredicted RBP29.49■■■□□ 2.31
RETREG1-204ENST00000509048 LMOD1P29536 600 aaPredicted RBP29.49■■■□□ 2.31
RETREG1-204ENST00000509048 RPS8P62241 208 aaKnown RBP29.49■■■□□ 2.31
RETREG1-204ENST00000509048 FAM9BQ8IZU0 186 aa29.49■■■□□ 2.31
RETREG1-204ENST00000509048 CREBZFQ9NS37 354 aa29.49■■■□□ 2.31
RETREG1-204ENST00000509048 EPS15P42566 896 aa29.48■■■□□ 2.31
RETREG1-204ENST00000509048 CXCL9Q07325 125 aa29.48■■■□□ 2.31
RETREG1-204ENST00000509048 CDHR2Q9BYE9 1310 aa29.47■■■□□ 2.31
RETREG1-204ENST00000509048 CCDC152Q4G0S7 254 aa29.47■■■□□ 2.31
RETREG1-204ENST00000509048 JARID2Q92833 1246 aaPredicted RBP29.47■■■□□ 2.31
RETREG1-204ENST00000509048 SEC31BQ9NQW1 1179 aa29.47■■■□□ 2.31
RETREG1-204ENST00000509048 CLEC11AQ9Y240 323 aa29.47■■■□□ 2.31
RETREG1-204ENST00000509048 VAMP4O75379 141 aa29.46■■■□□ 2.31
RETREG1-204ENST00000509048 NEXNQ0ZGT2 675 aa29.46■■■□□ 2.31
RETREG1-204ENST00000509048 NSFL1CQ9UNZ2 370 aaKnown RBP29.46■■■□□ 2.31
RETREG1-204ENST00000509048 GPSM2P81274 684 aa29.45■■■□□ 2.31
RETREG1-204ENST00000509048 FLIIQ13045 1269 aa29.45■■■□□ 2.31
RETREG1-204ENST00000509048 SPINK5Q9NQ38 1064 aaPredicted RBP29.45■■■□□ 2.31
RETREG1-204ENST00000509048 CACNA1FO60840 1977 aa29.44■■■□□ 2.3
RETREG1-204ENST00000509048 WASHC4Q2M389 1173 aa29.44■■■□□ 2.3
RETREG1-204ENST00000509048 GPRC5DQ9NZD1 345 aa29.44■■■□□ 2.3
RETREG1-204ENST00000509048 POLLQ9UGP5 575 aa29.44■■■□□ 2.3
RETREG1-204ENST00000509048 YDJCA8MPS7 323 aa29.43■■■□□ 2.3
RETREG1-204ENST00000509048 NEURL1BA8MQ27 555 aa29.43■■■□□ 2.3
RETREG1-204ENST00000509048 EXOSC9Q06265 439 aaKnown RBP29.43■■■□□ 2.3
RETREG1-204ENST00000509048 CWF19L2Q2TBE0 894 aaKnown RBP29.43■■■□□ 2.3
RETREG1-204ENST00000509048 MAP1SQ66K74 1059 aaPredicted RBP29.43■■■□□ 2.3
RETREG1-204ENST00000509048 CIAPIN1Q6FI81 312 aa29.43■■■□□ 2.3
RETREG1-204ENST00000509048 USP50Q70EL3 339 aaPredicted RBP29.43■■■□□ 2.3
RETREG1-204ENST00000509048 CNTROBQ8N137 903 aa29.43■■■□□ 2.3
RETREG1-204ENST00000509048 TNIP1Q15025 636 aa29.42■■■□□ 2.3
RETREG1-204ENST00000509048 PODXL2Q9NZ53 605 aa29.42■■■□□ 2.3
RETREG1-204ENST00000509048 RAD17O75943 681 aa29.41■■■□□ 2.3
RETREG1-204ENST00000509048 CTSWP56202 376 aa29.41■■■□□ 2.3
RETREG1-204ENST00000509048 C6orf229H3BNL8 230 aa29.4■■■□□ 2.3
RETREG1-204ENST00000509048 GMPSP49915 693 aaPredicted RBP29.4■■■□□ 2.3
RETREG1-204ENST00000509048 TBC1D16Q8TBP0 767 aa29.4■■■□□ 2.3
RETREG1-204ENST00000509048 MYH16Q9H6N6 1097 aa29.4■■■□□ 2.3
RETREG1-204ENST00000509048 ADARB2Q9NS39 739 aaKnown RBP29.4■■■□□ 2.3
RETREG1-204ENST00000509048 FKBP5Q13451 457 aaPredicted RBP29.39■■■□□ 2.3
RETREG1-204ENST00000509048 CCDC85AQ96PX6 553 aaPredicted RBP29.39■■■□□ 2.3
RETREG1-204ENST00000509048 EYA3Q99504 573 aa29.39■■■□□ 2.3
RETREG1-204ENST00000509048 TMEM88BA6NKF7 163 aa29.38■■■□□ 2.29
RETREG1-204ENST00000509048 H7C1W4 665 aa29.38■■■□□ 2.29
RETREG1-204ENST00000509048 TTLL11Q8NHH1 800 aa29.38■■■□□ 2.29
RETREG1-204ENST00000509048 MYH3P11055 1940 aa29.37■■■□□ 2.29
RETREG1-204ENST00000509048 GCKRQ14397 625 aa29.37■■■□□ 2.29
RETREG1-204ENST00000509048 ANKRD18AQ8IVF6 992 aa29.37■■■□□ 2.29
RETREG1-204ENST00000509048 DNAAF4Q8WXU2 420 aa29.37■■■□□ 2.29
RETREG1-204ENST00000509048 ZNF521Q96K83 1311 aa29.37■■■□□ 2.29
RETREG1-204ENST00000509048 RIMBP2O15034 1052 aa29.36■■■□□ 2.29
RETREG1-204ENST00000509048 DBNDD1Q9H9R9 158 aa29.36■■■□□ 2.29
RETREG1-204ENST00000509048 RTL9Q8NET4 1388 aa29.36■■■□□ 2.29
RETREG1-204ENST00000509048 UBE3BQ7Z3V4 1068 aa29.35■■■□□ 2.29
RETREG1-204ENST00000509048 LINS1Q8NG48 757 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms