RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CDHR2Q9BYE9 1310 aa17.54■□□□□ 0.4
CCHCR1-227ENST00000508852 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
CCHCR1-227ENST00000508852 POTEIP0CG38 1075 aa17.54■□□□□ 0.4
CCHCR1-227ENST00000508852 POTEJP0CG39 1038 aa17.54■□□□□ 0.4
CCHCR1-227ENST00000508852 TNIP1Q15025 636 aa17.54■□□□□ 0.4
CCHCR1-227ENST00000508852 ITGBL1O95965 494 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-227ENST00000508852 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
CCHCR1-227ENST00000508852 AOC3Q16853 763 aa17.53■□□□□ 0.4
CCHCR1-227ENST00000508852 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
CCHCR1-227ENST00000508852 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-227ENST00000508852 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
CCHCR1-227ENST00000508852 FAM89AQ96GI7 184 aa17.53■□□□□ 0.4
CCHCR1-227ENST00000508852 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
CCHCR1-227ENST00000508852 IRS4O14654 1257 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-227ENST00000508852 LRRC37AA6NMS7 1700 aa17.52■□□□□ 0.39
CCHCR1-227ENST00000508852 IL16Q14005 1332 aa17.51■□□□□ 0.39
CCHCR1-227ENST00000508852 ANP32CO43423 234 aa17.51■□□□□ 0.39
CCHCR1-227ENST00000508852 EYA3Q99504 573 aa17.51■□□□□ 0.39
CCHCR1-227ENST00000508852 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
CCHCR1-227ENST00000508852 ADARB2Q9NS39 739 aaKnown RBP17.51■□□□□ 0.39
CCHCR1-227ENST00000508852 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-227ENST00000508852 SCNN1DP51172 638 aa17.5■□□□□ 0.39
CCHCR1-227ENST00000508852 CIAPIN1Q6FI81 312 aa17.5■□□□□ 0.39
CCHCR1-227ENST00000508852 CWC25Q9NXE8 425 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-227ENST00000508852 COL4A5P29400 1685 aa17.5■□□□□ 0.39
CCHCR1-227ENST00000508852 CNTNAP1P78357 1384 aa17.5■□□□□ 0.39
CCHCR1-227ENST00000508852 CACNA1FO60840 1977 aa17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 CXCL9Q07325 125 aa17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 C8orf58Q8NAV2 365 aa17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 GPRC5DQ9NZD1 345 aa17.49■□□□□ 0.39
CCHCR1-227ENST00000508852 RPS8P62241 208 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 WASHC4Q2M389 1173 aa17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 MYD88Q99836 296 aa17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 BCL2L13Q9BXK5 485 aa17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 MKRN1Q9UHC7 482 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 NSFL1CQ9UNZ2 370 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 PCNTO95613 3336 aa17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 TAF1P21675 1872 aa17.48■□□□□ 0.39
CCHCR1-227ENST00000508852 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
CCHCR1-227ENST00000508852 PDE8AO60658 829 aa17.47■□□□□ 0.39
CCHCR1-227ENST00000508852 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
CCHCR1-227ENST00000508852 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
CCHCR1-227ENST00000508852 EPS15P42566 896 aa17.47■□□□□ 0.39
CCHCR1-227ENST00000508852 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
CCHCR1-227ENST00000508852 KSR2Q6VAB6 950 aa17.47■□□□□ 0.39
CCHCR1-227ENST00000508852 ZC3H15Q8WU90 426 aaKnown RBP17.47■□□□□ 0.39
CCHCR1-227ENST00000508852 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.39
CCHCR1-227ENST00000508852 CELF1Q92879 486 aaKnown RBP17.46■□□□□ 0.39
CCHCR1-227ENST00000508852 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
CCHCR1-227ENST00000508852 LTBP1Q14766 1721 aa17.46■□□□□ 0.39
CCHCR1-227ENST00000508852 RASSF10A6NK89 507 aa17.45■□□□□ 0.38
CCHCR1-227ENST00000508852 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
CCHCR1-227ENST00000508852 H7C1D1 291 aa17.45■□□□□ 0.38
CCHCR1-227ENST00000508852 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
CCHCR1-227ENST00000508852 TWISTNBQ3B726 338 aaPredicted RBP17.45■□□□□ 0.38
CCHCR1-227ENST00000508852 DPF2Q92785 391 aa17.45■□□□□ 0.38
CCHCR1-227ENST00000508852 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
CCHCR1-227ENST00000508852 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
CCHCR1-227ENST00000508852 GMPSP49915 693 aaPredicted RBP17.44■□□□□ 0.38
CCHCR1-227ENST00000508852 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
CCHCR1-227ENST00000508852 WDR63Q8IWG1 891 aa17.44■□□□□ 0.38
CCHCR1-227ENST00000508852 AIDAQ96BJ3 306 aa17.44■□□□□ 0.38
CCHCR1-227ENST00000508852 ZC3H12CQ9C0D7 883 aaKnown RBP17.44■□□□□ 0.38
CCHCR1-227ENST00000508852 MAP3K2Q9Y2U5 619 aa17.44■□□□□ 0.38
CCHCR1-227ENST00000508852 G3V3G9 751 aa17.43■□□□□ 0.38
CCHCR1-227ENST00000508852 RAD17O75943 681 aa17.43■□□□□ 0.38
CCHCR1-227ENST00000508852 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
CCHCR1-227ENST00000508852 CDC5LQ99459 802 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-227ENST00000508852 PGAP2Q9UHJ9 254 aa17.43■□□□□ 0.38
CCHCR1-227ENST00000508852 ABT1Q9ULW3 272 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-227ENST00000508852 DUOX1Q9NRD9 1551 aa17.43■□□□□ 0.38
CCHCR1-227ENST00000508852 MYH3P11055 1940 aa17.43■□□□□ 0.38
CCHCR1-227ENST00000508852 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 ECE1P42892 770 aa17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 GPSM2P81274 684 aa17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 TSR2Q969E8 191 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 ANKIB1Q9P2G1 1089 aa17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 CNOT7Q9UIV1 285 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-227ENST00000508852 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
CCHCR1-227ENST00000508852 VEGFBP49765 207 aa17.41■□□□□ 0.38
CCHCR1-227ENST00000508852 MAP2K1Q02750 393 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-227ENST00000508852 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
CCHCR1-227ENST00000508852 TBC1D16Q8TBP0 767 aa17.41■□□□□ 0.38
CCHCR1-227ENST00000508852 POLLQ9UGP5 575 aa17.41■□□□□ 0.38
CCHCR1-227ENST00000508852 GGA1Q9UJY5 639 aa17.41■□□□□ 0.38
CCHCR1-227ENST00000508852 CCDC184Q52MB2 194 aa17.4■□□□□ 0.38
CCHCR1-227ENST00000508852 COL13A1Q5TAT6 717 aaPredicted RBP17.4■□□□□ 0.38
CCHCR1-227ENST00000508852 CDC37L1Q7L3B6 337 aa17.4■□□□□ 0.38
CCHCR1-227ENST00000508852 TNS4Q8IZW8 715 aa17.4■□□□□ 0.38
CCHCR1-227ENST00000508852 ZNF428Q96B54 188 aa17.4■□□□□ 0.38
CCHCR1-227ENST00000508852 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms