RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 VPS33BQ9H267 617 aa23.31■■□□□ 1.32
SKP2-204ENST00000508514 HYPKQ9NX55 129 aa23.31■■□□□ 1.32
SKP2-204ENST00000508514 COL4A1P02462 1669 aa23.31■■□□□ 1.32
SKP2-204ENST00000508514 DPP8Q6V1X1 898 aaPredicted RBP23.3■■□□□ 1.32
SKP2-204ENST00000508514 MPNDQ8N594 471 aa23.3■■□□□ 1.32
SKP2-204ENST00000508514 PHAXQ9H814 394 aaKnown RBP23.3■■□□□ 1.32
SKP2-204ENST00000508514 IFT57Q9NWB7 429 aa23.3■■□□□ 1.32
SKP2-204ENST00000508514 ELL2O00472 640 aaPredicted RBP23.29■■□□□ 1.32
SKP2-204ENST00000508514 VEGFBP49765 207 aa23.29■■□□□ 1.32
SKP2-204ENST00000508514 TRIM28Q13263 835 aaKnown RBP23.29■■□□□ 1.32
SKP2-204ENST00000508514 SF3B3Q15393 1217 aaKnown RBP23.29■■□□□ 1.32
SKP2-204ENST00000508514 C8orf58Q8NAV2 365 aa23.29■■□□□ 1.32
SKP2-204ENST00000508514 ZNRF3Q9ULT6 936 aa23.29■■□□□ 1.32
SKP2-204ENST00000508514 DDX60Q8IY21 1712 aaKnown RBP23.28■■□□□ 1.32
SKP2-204ENST00000508514 KIAA2012Q0VF49 1180 aa23.28■■□□□ 1.32
SKP2-204ENST00000508514 RTL5Q5HYW3 569 aaPredicted RBP23.28■■□□□ 1.32
SKP2-204ENST00000508514 CELF1Q92879 486 aaKnown RBP23.28■■□□□ 1.32
SKP2-204ENST00000508514 DUOX1Q9NRD9 1551 aa23.27■■□□□ 1.32
SKP2-204ENST00000508514 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
SKP2-204ENST00000508514 SUPT20HQ8NEM7 779 aa23.27■■□□□ 1.32
SKP2-204ENST00000508514 TMX4Q9H1E5 349 aaPredicted RBP23.27■■□□□ 1.32
SKP2-204ENST00000508514 GPRC5DQ9NZD1 345 aa23.27■■□□□ 1.32
SKP2-204ENST00000508514 YDJCA8MPS7 323 aa23.26■■□□□ 1.31
SKP2-204ENST00000508514 GNAI1P63096 354 aa23.25■■□□□ 1.31
SKP2-204ENST00000508514 USP50Q70EL3 339 aaPredicted RBP23.25■■□□□ 1.31
SKP2-204ENST00000508514 GMPSP49915 693 aaPredicted RBP23.24■■□□□ 1.31
SKP2-204ENST00000508514 TSPYL6Q8N831 410 aa23.24■■□□□ 1.31
SKP2-204ENST00000508514 RASSF10A6NK89 507 aa23.23■■□□□ 1.31
SKP2-204ENST00000508514 TRAF5O00463 557 aa23.23■■□□□ 1.31
SKP2-204ENST00000508514 IRS4O14654 1257 aaPredicted RBP23.23■■□□□ 1.31
SKP2-204ENST00000508514 RAD17O75943 681 aa23.23■■□□□ 1.31
SKP2-204ENST00000508514 CST9Q5W186 159 aa23.23■■□□□ 1.31
SKP2-204ENST00000508514 LRRC37AA6NMS7 1700 aa23.22■■□□□ 1.31
SKP2-204ENST00000508514 SHTN1A0MZ66 631 aa23.22■■□□□ 1.31
SKP2-204ENST00000508514 FOXN1O15353 648 aa23.22■■□□□ 1.31
SKP2-204ENST00000508514 TMC4Q7Z404 712 aa23.22■■□□□ 1.31
SKP2-204ENST00000508514 RIC3Q7Z5B4 369 aa23.22■■□□□ 1.31
SKP2-204ENST00000508514 TNS4Q8IZW8 715 aa23.22■■□□□ 1.31
SKP2-204ENST00000508514 ADARB2Q9NS39 739 aaKnown RBP23.22■■□□□ 1.31
SKP2-204ENST00000508514 POLLQ9UGP5 575 aa23.22■■□□□ 1.31
SKP2-204ENST00000508514 HIRAP54198 1017 aaPredicted RBP23.21■■□□□ 1.31
SKP2-204ENST00000508514 GPSM2P81274 684 aa23.21■■□□□ 1.31
SKP2-204ENST00000508514 CIAPIN1Q6FI81 312 aa23.21■■□□□ 1.31
SKP2-204ENST00000508514 ZBTB38Q8NAP3 1195 aaPredicted RBP23.21■■□□□ 1.31
SKP2-204ENST00000508514 JARID2Q92833 1246 aaPredicted RBP23.21■■□□□ 1.31
SKP2-204ENST00000508514 CALD1Q05682 793 aaKnown RBP23.2■■□□□ 1.3
SKP2-204ENST00000508514 DEFB115Q30KQ5 88 aa23.2■■□□□ 1.3
SKP2-204ENST00000508514 MYD88Q99836 296 aa23.2■■□□□ 1.3
SKP2-204ENST00000508514 NSFL1CQ9UNZ2 370 aaKnown RBP23.2■■□□□ 1.3
SKP2-204ENST00000508514 GOLGA2Q08379 1002 aa23.19■■□□□ 1.3
SKP2-204ENST00000508514 SEC31BQ9NQW1 1179 aa23.19■■□□□ 1.3
SKP2-204ENST00000508514 PGAP2Q9UHJ9 254 aa23.19■■□□□ 1.3
SKP2-204ENST00000508514 RPS8P62241 208 aaKnown RBP23.18■■□□□ 1.3
SKP2-204ENST00000508514 TSR2Q969E8 191 aaKnown RBP23.18■■□□□ 1.3
SKP2-204ENST00000508514 GPR101Q96P66 508 aaPredicted RBP23.18■■□□□ 1.3
SKP2-204ENST00000508514 KCNQ5Q9NR82 932 aa23.18■■□□□ 1.3
SKP2-204ENST00000508514 WBP1LQ9NX94 342 aa23.18■■□□□ 1.3
SKP2-204ENST00000508514 TNIP1Q15025 636 aa23.17■■□□□ 1.3
SKP2-204ENST00000508514 WASHC4Q2M389 1173 aa23.17■■□□□ 1.3
SKP2-204ENST00000508514 TRPM4Q8TD43 1214 aa23.17■■□□□ 1.3
SKP2-204ENST00000508514 ABT1Q9ULW3 272 aaKnown RBP23.17■■□□□ 1.3
SKP2-204ENST00000508514 ZBTB12Q9Y330 459 aaPredicted RBP23.17■■□□□ 1.3
SKP2-204ENST00000508514 WDR33Q9C0J8 1336 aaKnown RBP23.16■■□□□ 1.3
SKP2-204ENST00000508514 RIMBP2O15034 1052 aa23.16■■□□□ 1.3
SKP2-204ENST00000508514 CCDC191Q8NCU4 936 aa23.16■■□□□ 1.3
SKP2-204ENST00000508514 METTL22Q9BUU2 404 aaPredicted RBP23.16■■□□□ 1.3
SKP2-204ENST00000508514 DBNDD1Q9H9R9 158 aa23.16■■□□□ 1.3
SKP2-204ENST00000508514 CNOT7Q9UIV1 285 aaKnown RBP23.16■■□□□ 1.3
SKP2-204ENST00000508514 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
SKP2-204ENST00000508514 CCDC30Q5VVM6 783 aa23.15■■□□□ 1.3
SKP2-204ENST00000508514 TBC1D16Q8TBP0 767 aa23.15■■□□□ 1.3
SKP2-204ENST00000508514 GLIS2Q9BZE0 524 aaPredicted RBP23.15■■□□□ 1.3
SKP2-204ENST00000508514 CDHR2Q9BYE9 1310 aa23.14■■□□□ 1.3
SKP2-204ENST00000508514 C6orf229H3BNL8 230 aa23.14■■□□□ 1.29
SKP2-204ENST00000508514 PSMD14O00487 310 aa23.14■■□□□ 1.29
SKP2-204ENST00000508514 CAPN15O75808 1086 aa23.14■■□□□ 1.29
SKP2-204ENST00000508514 WWC1Q8IX03 1113 aa23.14■■□□□ 1.29
SKP2-204ENST00000508514 BCL2L13Q9BXK5 485 aa23.14■■□□□ 1.29
SKP2-204ENST00000508514 RTL9Q8NET4 1388 aa23.14■■□□□ 1.29
SKP2-204ENST00000508514 IGKV5-2P06315 115 aa23.13■■□□□ 1.29
SKP2-204ENST00000508514 DOK7Q18PE1 504 aa23.13■■□□□ 1.29
SKP2-204ENST00000508514 CCDC27Q2M243 656 aa23.13■■□□□ 1.29
SKP2-204ENST00000508514 CWC25Q9NXE8 425 aaPredicted RBP23.13■■□□□ 1.29
SKP2-204ENST00000508514 MAP3K2Q9Y2U5 619 aa23.13■■□□□ 1.29
SKP2-204ENST00000508514 EGFRP00533 1210 aa23.12■■□□□ 1.29
SKP2-204ENST00000508514 DLK2Q6UY11 383 aa23.12■■□□□ 1.29
SKP2-204ENST00000508514 G2E3Q7L622 706 aa23.12■■□□□ 1.29
SKP2-204ENST00000508514 MICALL2Q8IY33 904 aa23.12■■□□□ 1.29
SKP2-204ENST00000508514 CCDC85AQ96PX6 553 aaPredicted RBP23.12■■□□□ 1.29
SKP2-204ENST00000508514 PODXL2Q9NZ53 605 aa23.12■■□□□ 1.29
SKP2-204ENST00000508514 TLL2Q9Y6L7 1015 aa23.12■■□□□ 1.29
SKP2-204ENST00000508514 PI4KAP2A4QPH2 592 aa23.11■■□□□ 1.29
SKP2-204ENST00000508514 ECE2O60344 883 aa23.11■■□□□ 1.29
SKP2-204ENST00000508514 PDE8AO60658 829 aa23.11■■□□□ 1.29
SKP2-204ENST00000508514 CYP4F22Q6NT55 531 aa23.11■■□□□ 1.29
SKP2-204ENST00000508514 KSR2Q6VAB6 950 aa23.11■■□□□ 1.29
SKP2-204ENST00000508514 PI4KAP1Q8N8J0 262 aa23.11■■□□□ 1.29
SKP2-204ENST00000508514 ZC3H15Q8WU90 426 aaKnown RBP23.11■■□□□ 1.29
SKP2-204ENST00000508514 PRDM10Q9NQV6 1147 aa23.11■■□□□ 1.29
SKP2-204ENST00000508514 CTCFP49711 727 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms