RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
PTPN20-218ENST00000508357 RBM17Q96I25 401 aaKnown RBP15.74■□□□□ 0.11
PTPN20-218ENST00000508357 LTBP3Q9NS15 1303 aa15.73■□□□□ 0.11
PTPN20-218ENST00000508357 PPEF1O14829 653 aaPredicted RBP15.73■□□□□ 0.11
PTPN20-218ENST00000508357 ALDH1B1P30837 517 aa15.73■□□□□ 0.11
PTPN20-218ENST00000508357 BRPF1P55201 1214 aaPredicted RBP15.73■□□□□ 0.11
PTPN20-218ENST00000508357 C9orf131Q5VYM1 1079 aa15.73■□□□□ 0.11
PTPN20-218ENST00000508357 CCDC88AQ3V6T2 1871 aa15.73■□□□□ 0.11
PTPN20-218ENST00000508357 SPEF2Q9C093 1822 aa15.73■□□□□ 0.11
PTPN20-218ENST00000508357 CTSWP56202 376 aa15.72■□□□□ 0.11
PTPN20-218ENST00000508357 CCDC93Q567U6 631 aa15.72■□□□□ 0.11
PTPN20-218ENST00000508357 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
PTPN20-218ENST00000508357 DICER1Q9UPY3 1922 aaKnown RBP15.72■□□□□ 0.11
PTPN20-218ENST00000508357 PDE8AO60658 829 aa15.71■□□□□ 0.11
PTPN20-218ENST00000508357 GRAPQ13588 217 aa15.71■□□□□ 0.11
PTPN20-218ENST00000508357 SLC4A10Q6U841 1118 aa15.71■□□□□ 0.11
PTPN20-218ENST00000508357 ZNF784Q8NCA9 323 aaPredicted RBP15.71■□□□□ 0.11
PTPN20-218ENST00000508357 GRAPLQ8TC17 118 aaPredicted RBP15.71■□□□□ 0.11
PTPN20-218ENST00000508357 CCDC85AQ96PX6 553 aaPredicted RBP15.71■□□□□ 0.11
PTPN20-218ENST00000508357 SEC31BQ9NQW1 1179 aa15.71■□□□□ 0.11
PTPN20-218ENST00000508357 RNF181Q9P0P0 153 aa15.71■□□□□ 0.11
PTPN20-218ENST00000508357 BCAR3O75815 825 aa15.7■□□□□ 0.1
PTPN20-218ENST00000508357 DDX46Q7L014 1031 aaKnown RBP15.7■□□□□ 0.1
PTPN20-218ENST00000508357 PLA2G12BQ9BX93 195 aa15.7■□□□□ 0.1
PTPN20-218ENST00000508357 TAOK3Q9H2K8 898 aa15.7■□□□□ 0.1
PTPN20-218ENST00000508357 NOB1Q9ULX3 412 aaKnown RBP15.7■□□□□ 0.1
PTPN20-218ENST00000508357 TNNQ9UQP3 1299 aa15.7■□□□□ 0.1
PTPN20-218ENST00000508357 GRM8O00222 908 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 ALDH1L1O75891 902 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 LMNB1P20700 586 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 FKBP4Q02790 459 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTPN20-218ENST00000508357 EPHA10Q5JZY3 1008 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 SOGA3Q5TF21 947 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 TTLL11Q8NHH1 800 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 SRCIN1Q9C0H9 1055 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 ATP6V0A2Q9Y487 856 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 RTL9Q8NET4 1388 aa15.69■□□□□ 0.1
PTPN20-218ENST00000508357 FOXO4P98177 505 aa15.68■□□□□ 0.1
PTPN20-218ENST00000508357 GREM2Q9H772 168 aa15.68■□□□□ 0.1
PTPN20-218ENST00000508357 ZNF277Q9NRM2 450 aaPredicted RBP15.68■□□□□ 0.1
PTPN20-218ENST00000508357 UTYO14607 1347 aa15.68■□□□□ 0.1
PTPN20-218ENST00000508357 KIF16BQ96L93 1317 aa15.68■□□□□ 0.1
PTPN20-218ENST00000508357 A0A1B0GUL6 1792 aa15.67■□□□□ 0.1
PTPN20-218ENST00000508357 FAM161AQ3B820 660 aa15.67■□□□□ 0.1
PTPN20-218ENST00000508357 CCDC152Q4G0S7 254 aa15.67■□□□□ 0.1
PTPN20-218ENST00000508357 KAZALD1Q96I82 304 aa15.67■□□□□ 0.1
PTPN20-218ENST00000508357 BBOX1O75936 387 aa15.66■□□□□ 0.1
PTPN20-218ENST00000508357 NBPF7P0C2Y1 421 aaPredicted RBP15.66■□□□□ 0.1
PTPN20-218ENST00000508357 RTKN2Q8IZC4 609 aa15.66■□□□□ 0.1
PTPN20-218ENST00000508357 SUCLG2Q96I99 432 aa15.66■□□□□ 0.1
PTPN20-218ENST00000508357 PSMD1Q99460 953 aa15.66■□□□□ 0.1
PTPN20-218ENST00000508357 CSF1RP07333 972 aa15.65■□□□□ 0.1
PTPN20-218ENST00000508357 TRIM27P14373 513 aa15.65■□□□□ 0.1
PTPN20-218ENST00000508357 HSP90B1P14625 803 aaKnown RBP15.65■□□□□ 0.1
PTPN20-218ENST00000508357 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
PTPN20-218ENST00000508357 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
PTPN20-218ENST00000508357 ZNF526Q8TF50 670 aaPredicted RBP15.64■□□□□ 0.09
PTPN20-218ENST00000508357 RTFDC1Q9BY42 306 aaPredicted RBP15.64■□□□□ 0.09
PTPN20-218ENST00000508357 API5Q9BZZ5 524 aaKnown RBP15.64■□□□□ 0.09
PTPN20-218ENST00000508357 USP44Q9H0E7 712 aa15.64■□□□□ 0.09
PTPN20-218ENST00000508357 IARSP41252 1262 aaKnown RBP15.63■□□□□ 0.09
PTPN20-218ENST00000508357 RPS8P62241 208 aaKnown RBP15.63■□□□□ 0.09
PTPN20-218ENST00000508357 GPSM2P81274 684 aa15.63■□□□□ 0.09
PTPN20-218ENST00000508357 ANKRD44Q8N8A2 993 aa15.63■□□□□ 0.09
PTPN20-218ENST00000508357 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
PTPN20-218ENST00000508357 ZC3H4Q9UPT8 1303 aaKnown RBP15.63■□□□□ 0.09
PTPN20-218ENST00000508357 ITGA6P23229 1130 aa15.62■□□□□ 0.09
PTPN20-218ENST00000508357 TMC4Q7Z404 712 aa15.62■□□□□ 0.09
PTPN20-218ENST00000508357 C9orf78Q9NZ63 289 aaPredicted RBP15.62■□□□□ 0.09
PTPN20-218ENST00000508357 ZNF541Q9H0D2 1346 aa15.62■□□□□ 0.09
PTPN20-218ENST00000508357 WDR90Q96KV7 1748 aa15.61■□□□□ 0.09
PTPN20-218ENST00000508357 CCT4P50991 539 aaKnown RBP15.61■□□□□ 0.09
PTPN20-218ENST00000508357 LMBR1LQ6UX01 489 aa15.61■□□□□ 0.09
PTPN20-218ENST00000508357 DPP8Q6V1X1 898 aaPredicted RBP15.61■□□□□ 0.09
PTPN20-218ENST00000508357 ATF7IPQ6VMQ6 1270 aa15.61■□□□□ 0.09
PTPN20-218ENST00000508357 ANKRD18AQ8IVF6 992 aa15.61■□□□□ 0.09
PTPN20-218ENST00000508357 MPNDQ8N594 471 aa15.61■□□□□ 0.09
PTPN20-218ENST00000508357 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
PTPN20-218ENST00000508357 GPR101Q96P66 508 aaPredicted RBP15.61■□□□□ 0.09
PTPN20-218ENST00000508357 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
PTPN20-218ENST00000508357 AOC3Q16853 763 aa15.6■□□□□ 0.09
PTPN20-218ENST00000508357 RABL6Q3YEC7 729 aaPredicted RBP15.6■□□□□ 0.09
PTPN20-218ENST00000508357 GRIPAP1Q4V328 841 aa15.6■□□□□ 0.09
PTPN20-218ENST00000508357 INTS3Q68E01 1043 aaKnown RBP15.6■□□□□ 0.09
PTPN20-218ENST00000508357 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
PTPN20-218ENST00000508357 POLLQ9UGP5 575 aa15.6■□□□□ 0.09
PTPN20-218ENST00000508357 WTIPA6NIX2 430 aaPredicted RBP15.59■□□□□ 0.09
PTPN20-218ENST00000508357 RLBP1P12271 317 aa15.59■□□□□ 0.09
PTPN20-218ENST00000508357 CLUAP1Q96AJ1 413 aa15.59■□□□□ 0.09
PTPN20-218ENST00000508357 MEIS3Q99687 375 aa15.59■□□□□ 0.09
PTPN20-218ENST00000508357 NMRK2Q9NPI5 230 aa15.59■□□□□ 0.09
PTPN20-218ENST00000508357 KIF3CO14782 793 aa15.58■□□□□ 0.08
PTPN20-218ENST00000508357 PPIP5K2O43314 1243 aa15.58■□□□□ 0.08
PTPN20-218ENST00000508357 TBC1D16Q8TBP0 767 aa15.58■□□□□ 0.08
PTPN20-218ENST00000508357 YTHDC1Q96MU7 727 aaKnown RBP15.58■□□□□ 0.08
PTPN20-218ENST00000508357 BSDC1Q9NW68 430 aaPredicted RBP15.58■□□□□ 0.08
PTPN20-218ENST00000508357 PODXL2Q9NZ53 605 aa15.58■□□□□ 0.08
PTPN20-218ENST00000508357 MINPP1Q9UNW1 487 aa15.58■□□□□ 0.08
PTPN20-218ENST00000508357 ZNF646O15015 1829 aaPredicted RBP15.57■□□□□ 0.08
PTPN20-218ENST00000508357 GLTPD2A6NH11 291 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms