RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 HSPA1AP0DMV8 641 aaKnown RBP20.54■□□□□ 0.88
SSBP2-207ENST00000507472 HSPA1BP0DMV9 641 aaKnown RBP20.54■□□□□ 0.88
SSBP2-207ENST00000507472 TRIM28Q13263 835 aaKnown RBP20.54■□□□□ 0.88
SSBP2-207ENST00000507472 CCDC184Q52MB2 194 aa20.54■□□□□ 0.88
SSBP2-207ENST00000507472 RIC3Q7Z5B4 369 aa20.54■□□□□ 0.88
SSBP2-207ENST00000507472 C8orf58Q8NAV2 365 aa20.54■□□□□ 0.88
SSBP2-207ENST00000507472 PHAXQ9H814 394 aaKnown RBP20.54■□□□□ 0.88
SSBP2-207ENST00000507472 ZNRF3Q9ULT6 936 aa20.54■□□□□ 0.88
SSBP2-207ENST00000507472 TMEM88BA6NKF7 163 aa20.53■□□□□ 0.88
SSBP2-207ENST00000507472 CXCL9Q07325 125 aa20.53■□□□□ 0.88
SSBP2-207ENST00000507472 SF3B3Q15393 1217 aaKnown RBP20.53■□□□□ 0.88
SSBP2-207ENST00000507472 ANKRD36CQ5JPF3 1778 aa20.53■□□□□ 0.88
SSBP2-207ENST00000507472 GOLGA2Q08379 1002 aa20.52■□□□□ 0.88
SSBP2-207ENST00000507472 IRS4O14654 1257 aaPredicted RBP20.51■□□□□ 0.87
SSBP2-207ENST00000507472 KIAA2012Q0VF49 1180 aa20.51■□□□□ 0.87
SSBP2-207ENST00000507472 TMC4Q7Z404 712 aa20.51■□□□□ 0.87
SSBP2-207ENST00000507472 CNTNAP1P78357 1384 aa20.5■□□□□ 0.87
SSBP2-207ENST00000507472 CELF1Q92879 486 aaKnown RBP20.5■□□□□ 0.87
SSBP2-207ENST00000507472 GPRC5DQ9NZD1 345 aa20.5■□□□□ 0.87
SSBP2-207ENST00000507472 LAMB2P55268 1798 aa20.49■□□□□ 0.87
SSBP2-207ENST00000507472 ADAMTSL1Q8N6G6 1762 aa20.49■□□□□ 0.87
SSBP2-207ENST00000507472 USP50Q70EL3 339 aaPredicted RBP20.49■□□□□ 0.87
SSBP2-207ENST00000507472 TSPYL6Q8N831 410 aa20.49■□□□□ 0.87
SSBP2-207ENST00000507472 TAF1P21675 1872 aa20.48■□□□□ 0.87
SSBP2-207ENST00000507472 LTBP1Q14766 1721 aa20.48■□□□□ 0.87
SSBP2-207ENST00000507472 RAD17O75943 681 aa20.48■□□□□ 0.87
SSBP2-207ENST00000507472 VEGFBP49765 207 aa20.48■□□□□ 0.87
SSBP2-207ENST00000507472 CCDC30Q5VVM6 783 aa20.48■□□□□ 0.87
SSBP2-207ENST00000507472 CIAPIN1Q6FI81 312 aa20.48■□□□□ 0.87
SSBP2-207ENST00000507472 ZBTB38Q8NAP3 1195 aaPredicted RBP20.48■□□□□ 0.87
SSBP2-207ENST00000507472 MYD88Q99836 296 aa20.48■□□□□ 0.87
SSBP2-207ENST00000507472 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
SSBP2-207ENST00000507472 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
SSBP2-207ENST00000507472 TSR2Q969E8 191 aaKnown RBP20.47■□□□□ 0.87
SSBP2-207ENST00000507472 ADARB2Q9NS39 739 aaKnown RBP20.47■□□□□ 0.87
SSBP2-207ENST00000507472 YDJCA8MPS7 323 aa20.46■□□□□ 0.87
SSBP2-207ENST00000507472 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
SSBP2-207ENST00000507472 FMR1Q06787 632 aaKnown RBP eCLIP20.46■□□□□ 0.871e-6■■□□□ 13.4
SSBP2-207ENST00000507472 TNIP1Q15025 636 aa20.46■□□□□ 0.87
SSBP2-207ENST00000507472 CHMP4AQ9BY43 222 aa20.46■□□□□ 0.87
SSBP2-207ENST00000507472 GPSM2P81274 684 aa20.45■□□□□ 0.86
SSBP2-207ENST00000507472 WASHC4Q2M389 1173 aa20.45■□□□□ 0.86
SSBP2-207ENST00000507472 DEFB115Q30KQ5 88 aa20.45■□□□□ 0.86
SSBP2-207ENST00000507472 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
SSBP2-207ENST00000507472 JARID2Q92833 1246 aaPredicted RBP20.45■□□□□ 0.86
SSBP2-207ENST00000507472 POLLQ9UGP5 575 aa20.45■□□□□ 0.86
SSBP2-207ENST00000507472 DDX60Q8IY21 1712 aaKnown RBP20.44■□□□□ 0.86
SSBP2-207ENST00000507472 C6orf229H3BNL8 230 aa20.44■□□□□ 0.86
SSBP2-207ENST00000507472 RIMBP2O15034 1052 aa20.44■□□□□ 0.86
SSBP2-207ENST00000507472 DDX58O95786 925 aaKnown RBP20.44■□□□□ 0.86
SSBP2-207ENST00000507472 PCCAP05165 728 aaPredicted RBP20.44■□□□□ 0.86
SSBP2-207ENST00000507472 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
SSBP2-207ENST00000507472 WWC1Q8IX03 1113 aa20.44■□□□□ 0.86
SSBP2-207ENST00000507472 METTL22Q9BUU2 404 aaPredicted RBP20.44■□□□□ 0.86
SSBP2-207ENST00000507472 BCL2L13Q9BXK5 485 aa20.44■□□□□ 0.86
SSBP2-207ENST00000507472 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
SSBP2-207ENST00000507472 RASSF10A6NK89 507 aa20.43■□□□□ 0.86
SSBP2-207ENST00000507472 TRAF5O00463 557 aa20.43■□□□□ 0.86
SSBP2-207ENST00000507472 HSP90B1P14625 803 aaKnown RBP20.43■□□□□ 0.86
SSBP2-207ENST00000507472 TNS4Q8IZW8 715 aa20.43■□□□□ 0.86
SSBP2-207ENST00000507472 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
SSBP2-207ENST00000507472 ABT1Q9ULW3 272 aaKnown RBP20.43■□□□□ 0.86
SSBP2-207ENST00000507472 MAP3K2Q9Y2U5 619 aa20.43■□□□□ 0.86
SSBP2-207ENST00000507472 PI4KAP2A4QPH2 592 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 PDE8AO60658 829 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 ZEB1P37275 1124 aaPredicted RBP20.41■□□□□ 0.86
SSBP2-207ENST00000507472 HIRAP54198 1017 aaPredicted RBP20.41■□□□□ 0.86
SSBP2-207ENST00000507472 CST9Q5W186 159 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 KSR2Q6VAB6 950 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 PI4KAP1Q8N8J0 262 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 TBC1D16Q8TBP0 767 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 DBNDD1Q9H9R9 158 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 CNOT7Q9UIV1 285 aaKnown RBP20.41■□□□□ 0.86
SSBP2-207ENST00000507472 DUOX1Q9NRD9 1551 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 COL4A1P02462 1669 aa20.41■□□□□ 0.86
SSBP2-207ENST00000507472 SHTN1A0MZ66 631 aa20.4■□□□□ 0.86
SSBP2-207ENST00000507472 FOXN1O15353 648 aa20.4■□□□□ 0.86
SSBP2-207ENST00000507472 CCDC152Q4G0S7 254 aa20.4■□□□□ 0.86
SSBP2-207ENST00000507472 GPR101Q96P66 508 aaPredicted RBP20.4■□□□□ 0.86
SSBP2-207ENST00000507472 CCDC85AQ96PX6 553 aaPredicted RBP20.4■□□□□ 0.86
SSBP2-207ENST00000507472 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
SSBP2-207ENST00000507472 CDHR2Q9BYE9 1310 aa20.4■□□□□ 0.86
SSBP2-207ENST00000507472 MRS2Q9HD23 443 aa20.4■□□□□ 0.86
SSBP2-207ENST00000507472 PGAP2Q9UHJ9 254 aa20.4■□□□□ 0.86
SSBP2-207ENST00000507472 ZBTB12Q9Y330 459 aaPredicted RBP20.4■□□□□ 0.86
SSBP2-207ENST00000507472 PSMD14O00487 310 aa20.39■□□□□ 0.85
SSBP2-207ENST00000507472 DOK7Q18PE1 504 aa20.39■□□□□ 0.85
SSBP2-207ENST00000507472 TWISTNBQ3B726 338 aaPredicted RBP20.39■□□□□ 0.85
SSBP2-207ENST00000507472 EYA3Q99504 573 aa20.39■□□□□ 0.85
SSBP2-207ENST00000507472 KCNQ5Q9NR82 932 aa20.39■□□□□ 0.85
SSBP2-207ENST00000507472 WDR33Q9C0J8 1336 aaKnown RBP20.38■□□□□ 0.85
SSBP2-207ENST00000507472 H7C1D1 291 aa20.38■□□□□ 0.85
SSBP2-207ENST00000507472 IGKV5-2P06315 115 aa20.38■□□□□ 0.85
SSBP2-207ENST00000507472 G2E3Q7L622 706 aa20.38■□□□□ 0.85
SSBP2-207ENST00000507472 MICALL2Q8IY33 904 aa20.38■□□□□ 0.85
SSBP2-207ENST00000507472 TRPM4Q8TD43 1214 aa20.38■□□□□ 0.85
SSBP2-207ENST00000507472 ZC3H15Q8WU90 426 aaKnown RBP20.38■□□□□ 0.85
SSBP2-207ENST00000507472 GLIS2Q9BZE0 524 aaPredicted RBP20.38■□□□□ 0.85
SSBP2-207ENST00000507472 PODXL2Q9NZ53 605 aa20.38■□□□□ 0.85
SSBP2-207ENST00000507472 ANKIB1Q9P2G1 1089 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 782.7 ms