RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
SNHG4-204ENST00000507197 TNIP1Q15025 636 aa16.67■□□□□ 0.26
SNHG4-204ENST00000507197 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
SNHG4-204ENST00000507197 ADARB2Q9NS39 739 aaKnown RBP16.67■□□□□ 0.26
SNHG4-204ENST00000507197 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
SNHG4-204ENST00000507197 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
SNHG4-204ENST00000507197 CXCL9Q07325 125 aa16.66■□□□□ 0.26
SNHG4-204ENST00000507197 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
SNHG4-204ENST00000507197 CIAPIN1Q6FI81 312 aa16.66■□□□□ 0.26
SNHG4-204ENST00000507197 GPRC5DQ9NZD1 345 aa16.66■□□□□ 0.26
SNHG4-204ENST00000507197 ABT1Q9ULW3 272 aaKnown RBP16.66■□□□□ 0.26
SNHG4-204ENST00000507197 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
SNHG4-204ENST00000507197 GNAI1P63096 354 aa16.65■□□□□ 0.26
SNHG4-204ENST00000507197 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
SNHG4-204ENST00000507197 MBIPQ9NS73 344 aa16.65■□□□□ 0.26
SNHG4-204ENST00000507197 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
SNHG4-204ENST00000507197 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
SNHG4-204ENST00000507197 TRIM28Q13263 835 aaKnown RBP16.64■□□□□ 0.25
SNHG4-204ENST00000507197 SF3B3Q15393 1217 aaKnown RBP16.64■□□□□ 0.25
SNHG4-204ENST00000507197 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
SNHG4-204ENST00000507197 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.25
SNHG4-204ENST00000507197 IFT57Q9NWB7 429 aa16.64■□□□□ 0.25
SNHG4-204ENST00000507197 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
SNHG4-204ENST00000507197 CAPN15O75808 1086 aa16.63■□□□□ 0.25
SNHG4-204ENST00000507197 ECE1P42892 770 aa16.63■□□□□ 0.25
SNHG4-204ENST00000507197 MAP2K1Q02750 393 aaPredicted RBP16.63■□□□□ 0.25
SNHG4-204ENST00000507197 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
SNHG4-204ENST00000507197 SLC51AQ86UW1 340 aa16.63■□□□□ 0.25
SNHG4-204ENST00000507197 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
SNHG4-204ENST00000507197 APAF1O14727 1248 aa16.62■□□□□ 0.25
SNHG4-204ENST00000507197 FOXN1O15353 648 aa16.62■□□□□ 0.25
SNHG4-204ENST00000507197 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
SNHG4-204ENST00000507197 GMPSP49915 693 aaPredicted RBP16.62■□□□□ 0.25
SNHG4-204ENST00000507197 ZC3H15Q8WU90 426 aaKnown RBP16.62■□□□□ 0.25
SNHG4-204ENST00000507197 WBP1LQ9NX94 342 aa16.62■□□□□ 0.25
SNHG4-204ENST00000507197 WDR33Q9C0J8 1336 aaKnown RBP16.62■□□□□ 0.25
SNHG4-204ENST00000507197 IRS4O14654 1257 aaPredicted RBP16.61■□□□□ 0.25
SNHG4-204ENST00000507197 RAD17O75943 681 aa16.61■□□□□ 0.25
SNHG4-204ENST00000507197 WASHC4Q2M389 1173 aa16.61■□□□□ 0.25
SNHG4-204ENST00000507197 EYA3Q99504 573 aa16.61■□□□□ 0.25
SNHG4-204ENST00000507197 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
SNHG4-204ENST00000507197 LTBP1Q14766 1721 aa16.61■□□□□ 0.25
SNHG4-204ENST00000507197 H7C1D1 291 aa16.6■□□□□ 0.25
SNHG4-204ENST00000507197 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
SNHG4-204ENST00000507197 PAXIP1Q6ZW49 1069 aaPredicted RBP16.6■□□□□ 0.25
SNHG4-204ENST00000507197 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
SNHG4-204ENST00000507197 BEGAINQ9BUH8 593 aa16.6■□□□□ 0.25
SNHG4-204ENST00000507197 LAMB2P55268 1798 aa16.59■□□□□ 0.25
SNHG4-204ENST00000507197 CELF1Q92879 486 aaKnown RBP16.59■□□□□ 0.25
SNHG4-204ENST00000507197 PGAP2Q9UHJ9 254 aa16.59■□□□□ 0.25
SNHG4-204ENST00000507197 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
SNHG4-204ENST00000507197 RPS8P62241 208 aaKnown RBP16.58■□□□□ 0.24
SNHG4-204ENST00000507197 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
SNHG4-204ENST00000507197 CCDC30Q5VVM6 783 aa16.58■□□□□ 0.24
SNHG4-204ENST00000507197 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
SNHG4-204ENST00000507197 DPF2Q92785 391 aa16.58■□□□□ 0.24
SNHG4-204ENST00000507197 ZNF428Q96B54 188 aa16.58■□□□□ 0.24
SNHG4-204ENST00000507197 CAPNS2Q96L46 248 aa16.58■□□□□ 0.24
SNHG4-204ENST00000507197 CNOT7Q9UIV1 285 aaKnown RBP16.58■□□□□ 0.24
SNHG4-204ENST00000507197 TLL2Q9Y6L7 1015 aa16.58■□□□□ 0.24
SNHG4-204ENST00000507197 TRAF5O00463 557 aa16.57■□□□□ 0.24
SNHG4-204ENST00000507197 ELL2O00472 640 aaPredicted RBP16.57■□□□□ 0.24
SNHG4-204ENST00000507197 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
SNHG4-204ENST00000507197 CCDC152Q4G0S7 254 aa16.57■□□□□ 0.24
SNHG4-204ENST00000507197 CST9Q5W186 159 aa16.57■□□□□ 0.24
SNHG4-204ENST00000507197 CDC37L1Q7L3B6 337 aa16.57■□□□□ 0.24
SNHG4-204ENST00000507197 GPR101Q96P66 508 aaPredicted RBP16.57■□□□□ 0.24
SNHG4-204ENST00000507197 PHAXQ9H814 394 aaKnown RBP16.57■□□□□ 0.24
SNHG4-204ENST00000507197 YDJCA8MPS7 323 aa16.56■□□□□ 0.24
SNHG4-204ENST00000507197 CELF2O95319 508 aaKnown RBP16.56■□□□□ 0.24
SNHG4-204ENST00000507197 PCCAP05165 728 aaPredicted RBP16.56■□□□□ 0.24
SNHG4-204ENST00000507197 MICALL2Q8IY33 904 aa16.56■□□□□ 0.24
SNHG4-204ENST00000507197 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
SNHG4-204ENST00000507197 MYD88Q99836 296 aa16.56■□□□□ 0.24
SNHG4-204ENST00000507197 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
SNHG4-204ENST00000507197 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
SNHG4-204ENST00000507197 G3V3G9 751 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 RIMBP2O15034 1052 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 MAP2K2P36507 400 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 LBX1P52954 281 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 GPSM2P81274 684 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNHG4-204ENST00000507197 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
SNHG4-204ENST00000507197 ZC3H12CQ9C0D7 883 aaKnown RBP16.55■□□□□ 0.24
SNHG4-204ENST00000507197 DBNDD1Q9H9R9 158 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 ANKIB1Q9P2G1 1089 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 POLLQ9UGP5 575 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 DDX60Q8IY21 1712 aaKnown RBP16.55■□□□□ 0.24
SNHG4-204ENST00000507197 DUOX1Q9NRD9 1551 aa16.55■□□□□ 0.24
SNHG4-204ENST00000507197 PSMD14O00487 310 aa16.54■□□□□ 0.24
SNHG4-204ENST00000507197 ECE2O60344 883 aa16.54■□□□□ 0.24
SNHG4-204ENST00000507197 PDE8AO60658 829 aa16.54■□□□□ 0.24
SNHG4-204ENST00000507197 GRM1Q13255 1194 aa16.54■□□□□ 0.24
SNHG4-204ENST00000507197 CYP4F22Q6NT55 531 aa16.54■□□□□ 0.24
SNHG4-204ENST00000507197 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
SNHG4-204ENST00000507197 TBC1D16Q8TBP0 767 aa16.54■□□□□ 0.24
SNHG4-204ENST00000507197 METTL22Q9BUU2 404 aaPredicted RBP16.54■□□□□ 0.24
SNHG4-204ENST00000507197 PODXL2Q9NZ53 605 aa16.54■□□□□ 0.24
SNHG4-204ENST00000507197 HSPA8P11142 646 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms