RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 CCDC152Q4G0S7 254 aa25.18■■□□□ 1.62
DDR1-259ENST00000507046 C9orf131Q5VYM1 1079 aa25.18■■□□□ 1.62
DDR1-259ENST00000507046 RTKN2Q8IZC4 609 aa25.18■■□□□ 1.62
DDR1-259ENST00000507046 RNF181Q9P0P0 153 aa25.18■■□□□ 1.62
DDR1-259ENST00000507046 BBOX1O75936 387 aa25.17■■□□□ 1.62
DDR1-259ENST00000507046 CTSWP56202 376 aa25.16■■□□□ 1.62
DDR1-259ENST00000507046 GRIPAP1Q4V328 841 aa25.16■■□□□ 1.62
DDR1-259ENST00000507046 TMC4Q7Z404 712 aa25.16■■□□□ 1.62
DDR1-259ENST00000507046 MYH3P11055 1940 aa25.16■■□□□ 1.62
DDR1-259ENST00000507046 SBF1O95248 1867 aa25.15■■□□□ 1.62
DDR1-259ENST00000507046 OLFM4Q6UX06 510 aa25.15■■□□□ 1.62
DDR1-259ENST00000507046 NOB1Q9ULX3 412 aaKnown RBP25.15■■□□□ 1.62
DDR1-259ENST00000507046 ATP6V0A2Q9Y487 856 aa25.15■■□□□ 1.62
DDR1-259ENST00000507046 FKBP4Q02790 459 aaKnown RBP eCLIP25.14■■□□□ 1.62
DDR1-259ENST00000507046 PLA2G12BQ9BX93 195 aa25.14■■□□□ 1.62
DDR1-259ENST00000507046 API5Q9BZZ5 524 aaKnown RBP25.14■■□□□ 1.62
DDR1-259ENST00000507046 C9orf78Q9NZ63 289 aaPredicted RBP25.14■■□□□ 1.62
DDR1-259ENST00000507046 GRM8O00222 908 aa25.13■■□□□ 1.61
DDR1-259ENST00000507046 CASP7P55210 303 aa25.13■■□□□ 1.61
DDR1-259ENST00000507046 ZNF784Q8NCA9 323 aaPredicted RBP25.12■■□□□ 1.61
DDR1-259ENST00000507046 CELF1Q92879 486 aaKnown RBP25.12■■□□□ 1.61
DDR1-259ENST00000507046 CCDC85AQ96PX6 553 aaPredicted RBP25.12■■□□□ 1.61
DDR1-259ENST00000507046 SNED1Q8TER0 1413 aa25.12■■□□□ 1.61
DDR1-259ENST00000507046 ZC3H4Q9UPT8 1303 aaKnown RBP25.12■■□□□ 1.61
DDR1-259ENST00000507046 SP8Q8IXZ3 490 aa25.11■■□□□ 1.61
DDR1-259ENST00000507046 PSMD1Q99460 953 aa25.11■■□□□ 1.61
DDR1-259ENST00000507046 TIAM2Q8IVF5 1701 aa25.11■■□□□ 1.61
DDR1-259ENST00000507046 TAF1P21675 1872 aa25.11■■□□□ 1.61
DDR1-259ENST00000507046 PRELPP51888 382 aa25.1■■□□□ 1.61
DDR1-259ENST00000507046 TTLL11Q8NHH1 800 aa25.1■■□□□ 1.61
DDR1-259ENST00000507046 ARHGAP45Q92619 1136 aa25.1■■□□□ 1.61
DDR1-259ENST00000507046 SEC31BQ9NQW1 1179 aa25.1■■□□□ 1.61
DDR1-259ENST00000507046 CCDC88AQ3V6T2 1871 aa25.1■■□□□ 1.61
DDR1-259ENST00000507046 LRRC37AA6NMS7 1700 aa25.09■■□□□ 1.61
DDR1-259ENST00000507046 RTL9Q8NET4 1388 aa25.09■■□□□ 1.61
DDR1-259ENST00000507046 IPO8O15397 1037 aaKnown RBP25.09■■□□□ 1.61
DDR1-259ENST00000507046 RPS8P62241 208 aaKnown RBP25.09■■□□□ 1.61
DDR1-259ENST00000507046 CDC5LQ99459 802 aaKnown RBP25.09■■□□□ 1.61
DDR1-259ENST00000507046 CCT4P50991 539 aaKnown RBP25.08■■□□□ 1.61
DDR1-259ENST00000507046 BCAR3O75815 825 aa25.07■■□□□ 1.6
DDR1-259ENST00000507046 ANKRD18AQ8IVF6 992 aa25.07■■□□□ 1.6
DDR1-259ENST00000507046 GREM2Q9H772 168 aa25.07■■□□□ 1.6
DDR1-259ENST00000507046 ZNF277Q9NRM2 450 aaPredicted RBP25.07■■□□□ 1.6
DDR1-259ENST00000507046 DICER1Q9UPY3 1922 aaKnown RBP25.07■■□□□ 1.6
DDR1-259ENST00000507046 COL4A1P02462 1669 aa25.07■■□□□ 1.6
DDR1-259ENST00000507046 DPP8Q6V1X1 898 aaPredicted RBP25.06■■□□□ 1.6
DDR1-259ENST00000507046 SLC51AQ86UW1 340 aa25.06■■□□□ 1.6
DDR1-259ENST00000507046 MPNDQ8N594 471 aa25.06■■□□□ 1.6
DDR1-259ENST00000507046 SUPT20HQ8NEM7 779 aa25.06■■□□□ 1.6
DDR1-259ENST00000507046 FRAT1Q92837 279 aaPredicted RBP25.06■■□□□ 1.6
DDR1-259ENST00000507046 IARSP41252 1262 aaKnown RBP25.05■■□□□ 1.6
DDR1-259ENST00000507046 ZNF526Q8TF50 670 aaPredicted RBP25.05■■□□□ 1.6
DDR1-259ENST00000507046 UTYO14607 1347 aa25.05■■□□□ 1.6
DDR1-259ENST00000507046 CSF1RP07333 972 aa25.04■■□□□ 1.6
DDR1-259ENST00000507046 FAM161AQ3B820 660 aa25.04■■□□□ 1.6
DDR1-259ENST00000507046 GPBP1L1Q9HC44 474 aaPredicted RBP25.04■■□□□ 1.6
DDR1-259ENST00000507046 NBPF7P0C2Y1 421 aaPredicted RBP25.03■■□□□ 1.6
DDR1-259ENST00000507046 ITGA6P23229 1130 aa25.03■■□□□ 1.6
DDR1-259ENST00000507046 ATF7IPQ6VMQ6 1270 aa25.03■■□□□ 1.6
DDR1-259ENST00000507046 CHMP3Q9Y3E7 222 aa25.03■■□□□ 1.6
DDR1-259ENST00000507046 IGHMBP2P38935 993 aaKnown RBP25.02■■□□□ 1.6
DDR1-259ENST00000507046 FOXO4P98177 505 aa25.02■■□□□ 1.6
DDR1-259ENST00000507046 RTFDC1Q9BY42 306 aaPredicted RBP25.02■■□□□ 1.6
DDR1-259ENST00000507046 ANKRD18BA2A2Z9 1011 aa25.01■■□□□ 1.59
DDR1-259ENST00000507046 TRIM27P14373 513 aa25.01■■□□□ 1.59
DDR1-259ENST00000507046 ZKSCAN2Q63HK3 967 aa25.01■■□□□ 1.59
DDR1-259ENST00000507046 JDP2Q8WYK2 163 aa25.01■■□□□ 1.59
DDR1-259ENST00000507046 SUCLG2Q96I99 432 aa25.01■■□□□ 1.59
DDR1-259ENST00000507046 VPS33BQ9H267 617 aa25.01■■□□□ 1.59
DDR1-259ENST00000507046 NSFL1CQ9UNZ2 370 aaKnown RBP25.01■■□□□ 1.59
DDR1-259ENST00000507046 KDM2BQ8NHM5 1336 aa25.01■■□□□ 1.59
DDR1-259ENST00000507046 SPEF2Q9C093 1822 aa25■■□□□ 1.59
DDR1-259ENST00000507046 IFIT5Q13325 482 aaKnown RBP25■■□□□ 1.59
DDR1-259ENST00000507046 EPHA10Q5JZY3 1008 aa25■■□□□ 1.59
DDR1-259ENST00000507046 LMBR1LQ6UX01 489 aa25■■□□□ 1.59
DDR1-259ENST00000507046 LARGE2Q8N3Y3 721 aa25■■□□□ 1.59
DDR1-259ENST00000507046 USP44Q9H0E7 712 aa25■■□□□ 1.59
DDR1-259ENST00000507046 PPIP5K2O43314 1243 aa24.99■■□□□ 1.59
DDR1-259ENST00000507046 DUOX1Q9NRD9 1551 aa24.99■■□□□ 1.59
DDR1-259ENST00000507046 BSDC1Q9NW68 430 aaPredicted RBP24.99■■□□□ 1.59
DDR1-259ENST00000507046 GPSM2P81274 684 aa24.98■■□□□ 1.59
DDR1-259ENST00000507046 CCDC57Q2TAC2 916 aa24.98■■□□□ 1.59
DDR1-259ENST00000507046 INTS3Q68E01 1043 aaKnown RBP24.98■■□□□ 1.59
DDR1-259ENST00000507046 DPY19L2Q6NUT2 758 aa24.98■■□□□ 1.59
DDR1-259ENST00000507046 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
DDR1-259ENST00000507046 MPHOSPH8Q99549 860 aa24.98■■□□□ 1.59
DDR1-259ENST00000507046 ANKIB1Q9P2G1 1089 aa24.98■■□□□ 1.59
DDR1-259ENST00000507046 LTBP1Q14766 1721 aa24.98■■□□□ 1.59
DDR1-259ENST00000507046 UBTFL1P0CB47 393 aaPredicted RBP24.97■■□□□ 1.59
DDR1-259ENST00000507046 AOC3Q16853 763 aa24.97■■□□□ 1.59
DDR1-259ENST00000507046 NIM1KQ8IY84 436 aa24.97■■□□□ 1.59
DDR1-259ENST00000507046 XDHP47989 1333 aa24.96■■□□□ 1.59
DDR1-259ENST00000507046 GLTPD2A6NH11 291 aa24.96■■□□□ 1.59
DDR1-259ENST00000507046 C6orf229H3BNL8 230 aa24.96■■□□□ 1.59
DDR1-259ENST00000507046 TAF7LQ5H9L4 462 aa24.96■■□□□ 1.59
DDR1-259ENST00000507046 CLUAP1Q96AJ1 413 aa24.96■■□□□ 1.59
DDR1-259ENST00000507046 BICC1Q9H694 974 aaKnown RBP24.96■■□□□ 1.59
DDR1-259ENST00000507046 PODXL2Q9NZ53 605 aa24.96■■□□□ 1.59
DDR1-259ENST00000507046 HDAC5Q9UQL6 1122 aa24.96■■□□□ 1.59
DDR1-259ENST00000507046 KIAA2012Q0VF49 1180 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms