RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TRIM28Q13263 835 aaKnown RBP21.62■■□□□ 1.05
PDLIM7-215ENST00000506161 CELF1Q92879 486 aaKnown RBP21.62■■□□□ 1.05
PDLIM7-215ENST00000506161 PRDM10Q9NQV6 1147 aa21.62■■□□□ 1.05
PDLIM7-215ENST00000506161 GOLGA2Q08379 1002 aa21.61■■□□□ 1.05
PDLIM7-215ENST00000506161 TWISTNBQ3B726 338 aaPredicted RBP21.61■■□□□ 1.05
PDLIM7-215ENST00000506161 CCDC30Q5VVM6 783 aa21.61■■□□□ 1.05
PDLIM7-215ENST00000506161 CHADLQ6NUI6 762 aa21.61■■□□□ 1.05
PDLIM7-215ENST00000506161 NCBP3Q53F19 620 aaKnown RBP21.6■■□□□ 1.05
PDLIM7-215ENST00000506161 CC2D2BQ6DHV5 1058 aa21.6■■□□□ 1.05
PDLIM7-215ENST00000506161 L3MBTL3Q96JM7 780 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-215ENST00000506161 IGKV5-2P06315 115 aa21.59■■□□□ 1.05
PDLIM7-215ENST00000506161 GRAPQ13588 217 aa21.59■■□□□ 1.05
PDLIM7-215ENST00000506161 AOC3Q16853 763 aa21.59■■□□□ 1.05
PDLIM7-215ENST00000506161 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-215ENST00000506161 METTL22Q9BUU2 404 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-215ENST00000506161 MAP3K2Q9Y2U5 619 aa21.59■■□□□ 1.05
PDLIM7-215ENST00000506161 IRS4O14654 1257 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-215ENST00000506161 SF3B3Q15393 1217 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-215ENST00000506161 AIDAQ96BJ3 306 aa21.58■■□□□ 1.05
PDLIM7-215ENST00000506161 CNTNAP1P78357 1384 aa21.58■■□□□ 1.04
PDLIM7-215ENST00000506161 PI4KAP2A4QPH2 592 aa21.57■■□□□ 1.04
PDLIM7-215ENST00000506161 CTCFP49711 727 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-215ENST00000506161 EXOSC9Q06265 439 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-215ENST00000506161 DDX46Q7L014 1031 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-215ENST00000506161 SP8Q8IXZ3 490 aa21.57■■□□□ 1.04
PDLIM7-215ENST00000506161 PI4KAP1Q8N8J0 262 aa21.57■■□□□ 1.04
PDLIM7-215ENST00000506161 TAF1DQ9H5J8 278 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-215ENST00000506161 SEC31BQ9NQW1 1179 aa21.57■■□□□ 1.04
PDLIM7-215ENST00000506161 VAMP4O75379 141 aa21.56■■□□□ 1.04
PDLIM7-215ENST00000506161 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
PDLIM7-215ENST00000506161 LARGE2Q8N3Y3 721 aa21.56■■□□□ 1.04
PDLIM7-215ENST00000506161 ZBTB38Q8NAP3 1195 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-215ENST00000506161 RTFDC1Q9BY42 306 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-215ENST00000506161 SCN9AQ15858 1988 aa21.56■■□□□ 1.04
PDLIM7-215ENST00000506161 BBOX1O75936 387 aa21.55■■□□□ 1.04
PDLIM7-215ENST00000506161 CWF19L2Q2TBE0 894 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-215ENST00000506161 KSR2Q6VAB6 950 aa21.55■■□□□ 1.04
PDLIM7-215ENST00000506161 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
PDLIM7-215ENST00000506161 PPIP5K2O43314 1243 aa21.54■■□□□ 1.04
PDLIM7-215ENST00000506161 SLC4A2P04920 1241 aa21.54■■□□□ 1.04
PDLIM7-215ENST00000506161 PCCAP05165 728 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-215ENST00000506161 CCDC191Q8NCU4 936 aa21.54■■□□□ 1.04
PDLIM7-215ENST00000506161 CCDC85AQ96PX6 553 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-215ENST00000506161 MPNDQ8N594 471 aa21.53■■□□□ 1.04
PDLIM7-215ENST00000506161 JDP2Q8WYK2 163 aa21.53■■□□□ 1.04
PDLIM7-215ENST00000506161 GPR101Q96P66 508 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-215ENST00000506161 CWC25Q9NXE8 425 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-215ENST00000506161 GJA3Q9Y6H8 435 aa21.53■■□□□ 1.04
PDLIM7-215ENST00000506161 SCNN1DP51172 638 aa21.52■■□□□ 1.04
PDLIM7-215ENST00000506161 DPP8Q6V1X1 898 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-215ENST00000506161 YDJCA8MPS7 323 aa21.51■■□□□ 1.03
PDLIM7-215ENST00000506161 GPSM2P81274 684 aa21.51■■□□□ 1.03
PDLIM7-215ENST00000506161 FLIIQ13045 1269 aa21.51■■□□□ 1.03
PDLIM7-215ENST00000506161 GPC2Q8N158 579 aa21.51■■□□□ 1.03
PDLIM7-215ENST00000506161 STK31Q9BXU1 1019 aa21.51■■□□□ 1.03
PDLIM7-215ENST00000506161 HACL1Q9UJ83 578 aa21.51■■□□□ 1.03
PDLIM7-215ENST00000506161 ZNF646O15015 1829 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 NEURL1BA8MQ27 555 aa21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 DDX58O95786 925 aaKnown RBP21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 EPHX2P34913 555 aa21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 FAM161AQ3B820 660 aa21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 GRIPAP1Q4V328 841 aa21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 NIM1KQ8IY84 436 aa21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 POLLQ9UGP5 575 aa21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 PASKQ96RG2 1323 aa21.5■■□□□ 1.03
PDLIM7-215ENST00000506161 A0A1B0GUL6 1792 aa21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 EPS15P42566 896 aa21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 VEGFBP49765 207 aa21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 LBX1P52954 281 aa21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 EIF6P56537 245 aaKnown RBP21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 CXCL9Q07325 125 aa21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 KIAA2012Q0VF49 1180 aa21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 EAPPQ56P03 285 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 CDHR2Q9BYE9 1310 aa21.49■■□□□ 1.03
PDLIM7-215ENST00000506161 PSME4Q14997 1843 aa21.48■■□□□ 1.03
PDLIM7-215ENST00000506161 IQCA1LA6NCM1 817 aa21.48■■□□□ 1.03
PDLIM7-215ENST00000506161 WTIPA6NIX2 430 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-215ENST00000506161 PDE8AO60658 829 aa21.48■■□□□ 1.03
PDLIM7-215ENST00000506161 LDHDQ86WU2 507 aa21.48■■□□□ 1.03
PDLIM7-215ENST00000506161 WBP1LQ9NX94 342 aa21.48■■□□□ 1.03
PDLIM7-215ENST00000506161 SHTN1A0MZ66 631 aa21.47■■□□□ 1.03
PDLIM7-215ENST00000506161 TMEM88BA6NKF7 163 aa21.47■■□□□ 1.03
PDLIM7-215ENST00000506161 F6X3S4 739 aa21.47■■□□□ 1.03
PDLIM7-215ENST00000506161 ITGBL1O95965 494 aaPredicted RBP21.47■■□□□ 1.03
PDLIM7-215ENST00000506161 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-215ENST00000506161 ABHD8Q96I13 439 aa21.47■■□□□ 1.03
PDLIM7-215ENST00000506161 CASP7P55210 303 aa21.46■■□□□ 1.03
PDLIM7-215ENST00000506161 FMR1Q06787 632 aaKnown RBP eCLIP21.46■■□□□ 1.03
PDLIM7-215ENST00000506161 KCNQ5Q9NR82 932 aa21.46■■□□□ 1.03
PDLIM7-215ENST00000506161 ZNRF3Q9ULT6 936 aa21.46■■□□□ 1.03
PDLIM7-215ENST00000506161 NSFL1CQ9UNZ2 370 aaKnown RBP21.46■■□□□ 1.03
PDLIM7-215ENST00000506161 H7C1W4 665 aa21.45■■□□□ 1.02
PDLIM7-215ENST00000506161 RAD17O75943 681 aa21.45■■□□□ 1.02
PDLIM7-215ENST00000506161 CTSWP56202 376 aa21.45■■□□□ 1.02
PDLIM7-215ENST00000506161 UBE3BQ7Z3V4 1068 aa21.45■■□□□ 1.02
PDLIM7-215ENST00000506161 SUPT20HQ8NEM7 779 aa21.45■■□□□ 1.02
PDLIM7-215ENST00000506161 TRPM7Q96QT4 1865 aa21.44■■□□□ 1.02
PDLIM7-215ENST00000506161 RIMBP2O15034 1052 aa21.44■■□□□ 1.02
PDLIM7-215ENST00000506161 FKBP5Q13451 457 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-215ENST00000506161 MAP1SQ66K74 1059 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms