RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 NLRP13Q86W25 1043 aa10.08□□□□□ -0.8
NIPBL-205ENST00000505998 GJD3Q8N144 294 aa10.08□□□□□ -0.8
NIPBL-205ENST00000505998 GDF2Q9UK05 429 aaPredicted RBP10.08□□□□□ -0.8
NIPBL-205ENST00000505998 A6NHS1 94 aa10.07□□□□□ -0.8
NIPBL-205ENST00000505998 SLURP2P0DP57 97 aa10.07□□□□□ -0.8
NIPBL-205ENST00000505998 PDE3BQ13370 1112 aa10.07□□□□□ -0.8
NIPBL-205ENST00000505998 GOLGA6L1Q8N7Z2 621 aa10.07□□□□□ -0.8
NIPBL-205ENST00000505998 GGA1Q9UJY5 639 aa10.07□□□□□ -0.8
NIPBL-205ENST00000505998 NEURL1BA8MQ27 555 aa10.06□□□□□ -0.8
NIPBL-205ENST00000505998 SIN3BO75182 1162 aa10.06□□□□□ -0.8
NIPBL-205ENST00000505998 ACDQ96AP0 544 aa10.06□□□□□ -0.8
NIPBL-205ENST00000505998 RBCK1Q9BYM8 510 aa10.06□□□□□ -0.8
NIPBL-205ENST00000505998 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
NIPBL-205ENST00000505998 ZFATQ9P243 1243 aa10.06□□□□□ -0.8
NIPBL-205ENST00000505998 WIPF1O43516 503 aa10.05□□□□□ -0.8
NIPBL-205ENST00000505998 TTC39BQ5VTQ0 682 aaPredicted RBP10.05□□□□□ -0.8
NIPBL-205ENST00000505998 XKR5Q6UX68 686 aa10.05□□□□□ -0.8
NIPBL-205ENST00000505998 KLF15Q9UIH9 416 aa10.05□□□□□ -0.8
NIPBL-205ENST00000505998 MAP3K6O95382 1288 aa10.04□□□□□ -0.8
NIPBL-205ENST00000505998 TBC1D8BQ0IIM8 1120 aa10.04□□□□□ -0.8
NIPBL-205ENST00000505998 CCDC27Q2M243 656 aa10.04□□□□□ -0.8
NIPBL-205ENST00000505998 TMCO4Q5TGY1 634 aa10.04□□□□□ -0.8
NIPBL-205ENST00000505998 FAM129BQ96TA1 746 aa10.04□□□□□ -0.8
NIPBL-205ENST00000505998 IGFLR1Q9H665 355 aa10.04□□□□□ -0.8
NIPBL-205ENST00000505998 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
NIPBL-205ENST00000505998 MMP20O60882 483 aa10.03□□□□□ -0.8
NIPBL-205ENST00000505998 PSAPP07602 524 aa10.03□□□□□ -0.8
NIPBL-205ENST00000505998 SLCO4C1Q6ZQN7 724 aa10.03□□□□□ -0.8
NIPBL-205ENST00000505998 FCHSD1Q86WN1 690 aa10.03□□□□□ -0.8
NIPBL-205ENST00000505998 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
NIPBL-205ENST00000505998 DMRTB1Q96MA1 342 aa10.03□□□□□ -0.8
NIPBL-205ENST00000505998 UBE2OQ9C0C9 1292 aaKnown RBP10.03□□□□□ -0.8
NIPBL-205ENST00000505998 TMEM63CQ9P1W3 806 aa10.03□□□□□ -0.8
NIPBL-205ENST00000505998 DHX32Q7L7V1 743 aaKnown RBP10.02□□□□□ -0.81
NIPBL-205ENST00000505998 TMC7Q7Z402 723 aa10.02□□□□□ -0.81
NIPBL-205ENST00000505998 TNFRSF25Q93038 417 aa10.02□□□□□ -0.81
NIPBL-205ENST00000505998 TLR7Q9NYK1 1049 aaKnown RBP10.02□□□□□ -0.81
NIPBL-205ENST00000505998 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
NIPBL-205ENST00000505998 BCRP11274 1271 aa10.01□□□□□ -0.81
NIPBL-205ENST00000505998 LYPD4Q6UWN0 246 aa10.01□□□□□ -0.81
NIPBL-205ENST00000505998 SNX29Q8TEQ0 813 aa10.01□□□□□ -0.81
NIPBL-205ENST00000505998 ASB16Q96NS5 453 aa10.01□□□□□ -0.81
NIPBL-205ENST00000505998 TNFRSF21O75509 655 aa10□□□□□ -0.81
NIPBL-205ENST00000505998 NEFLP07196 543 aa10□□□□□ -0.81
NIPBL-205ENST00000505998 MAP3K10Q02779 954 aa10□□□□□ -0.81
NIPBL-205ENST00000505998 PLAURQ03405 335 aa10□□□□□ -0.81
NIPBL-205ENST00000505998 GALNT6Q8NCL4 622 aa10□□□□□ -0.81
NIPBL-205ENST00000505998 WHAMMQ8TF30 809 aa10□□□□□ -0.81
NIPBL-205ENST00000505998 DNAJB12Q9NXW2 375 aaKnown RBP10□□□□□ -0.81
NIPBL-205ENST00000505998 ELOA3CA0A087WX78 387 aaPredicted RBP9.99□□□□□ -0.81
NIPBL-205ENST00000505998 ELOA3DA6NLF2 546 aaPredicted RBP9.99□□□□□ -0.81
NIPBL-205ENST00000505998 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 PHF20L1A8MW92 1017 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 GPR182O15218 404 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 OIP5O43482 229 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 EPXP11678 715 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 ADH7P40394 386 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 PCSK7Q16549 785 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 ELOA3BQ3SY89 546 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 SVOPQ8N4V2 548 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 ELOA3Q8NG57 546 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 OR13H1Q8NG92 308 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 EDARADDQ8WWZ3 215 aa9.99□□□□□ -0.81
NIPBL-205ENST00000505998 FOXD3Q9UJU5 478 aaPredicted RBP9.99□□□□□ -0.81
NIPBL-205ENST00000505998 PHACTR2O75167 634 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 ALAS2P22557 587 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 SOX18P35713 384 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 NRLP54845 237 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 GPLD1P80108 840 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 ZNF385CQ66K41 422 aaPredicted RBP9.98□□□□□ -0.81
NIPBL-205ENST00000505998 C1orf127Q8N9H9 656 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 NIF3L1Q9GZT8 377 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 LRRC4BQ9NT99 713 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 CNTN3Q9P232 1028 aa9.98□□□□□ -0.81
NIPBL-205ENST00000505998 IGHA2P01877 340 aa9.97□□□□□ -0.81
NIPBL-205ENST00000505998 INSM1Q01101 510 aaPredicted RBP9.97□□□□□ -0.81
NIPBL-205ENST00000505998 MLLT1Q03111 559 aaPredicted RBP9.97□□□□□ -0.81
NIPBL-205ENST00000505998 C1orf229Q6ZS94 237 aaPredicted RBP9.97□□□□□ -0.81
NIPBL-205ENST00000505998 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
NIPBL-205ENST00000505998 PMEPA1Q969W9 287 aa9.97□□□□□ -0.81
NIPBL-205ENST00000505998 ALKBH8Q96BT7 664 aaKnown RBP9.97□□□□□ -0.81
NIPBL-205ENST00000505998 SLC6A14Q9UN76 642 aa9.97□□□□□ -0.81
NIPBL-205ENST00000505998 CYP2E1P05181 493 aaPredicted RBP9.96□□□□□ -0.82
NIPBL-205ENST00000505998 CES1P23141 567 aa9.96□□□□□ -0.82
NIPBL-205ENST00000505998 PLCB3Q01970 1234 aa9.96□□□□□ -0.82
NIPBL-205ENST00000505998 ZSCAN1Q8NBB4 408 aa9.96□□□□□ -0.82
NIPBL-205ENST00000505998 NSUN5Q96P11 429 aaKnown RBP9.96□□□□□ -0.82
NIPBL-205ENST00000505998 MDFIQ99750 246 aa9.96□□□□□ -0.82
NIPBL-205ENST00000505998 ENAMQ9NRM1 1142 aa9.96□□□□□ -0.82
NIPBL-205ENST00000505998 ZBTB42B2RXF5 422 aa9.95□□□□□ -0.82
NIPBL-205ENST00000505998 TREHO43280 583 aa9.95□□□□□ -0.82
NIPBL-205ENST00000505998 HOXD8P13378 290 aaPredicted RBP9.95□□□□□ -0.82
NIPBL-205ENST00000505998 AMPD1P23109 780 aa9.95□□□□□ -0.82
NIPBL-205ENST00000505998 HYAL2Q12891 473 aa9.95□□□□□ -0.82
NIPBL-205ENST00000505998 KANSL3Q9P2N6 904 aa9.95□□□□□ -0.82
NIPBL-205ENST00000505998 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
NIPBL-205ENST00000505998 ANKRD33BA6NCL7 494 aa9.94□□□□□ -0.82
NIPBL-205ENST00000505998 MFAP1P55081 439 aaKnown RBP9.94□□□□□ -0.82
NIPBL-205ENST00000505998 SIK1P57059 783 aa9.94□□□□□ -0.82
NIPBL-205ENST00000505998 ORC1Q13415 861 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms