RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 APAF1O14727 1248 aa26.49■■□□□ 1.83
TRIO-207ENST00000505971 LMOD1P29536 600 aaPredicted RBP26.49■■□□□ 1.83
TRIO-207ENST00000505971 SF3B3Q15393 1217 aaKnown RBP26.49■■□□□ 1.83
TRIO-207ENST00000505971 MPNDQ8N594 471 aa26.49■■□□□ 1.83
TRIO-207ENST00000505971 CXCL9Q07325 125 aa26.48■■□□□ 1.83
TRIO-207ENST00000505971 KIAA2012Q0VF49 1180 aa26.48■■□□□ 1.83
TRIO-207ENST00000505971 DPP8Q6V1X1 898 aaPredicted RBP26.48■■□□□ 1.83
TRIO-207ENST00000505971 USP50Q70EL3 339 aaPredicted RBP26.48■■□□□ 1.83
TRIO-207ENST00000505971 TMC4Q7Z404 712 aa26.48■■□□□ 1.83
TRIO-207ENST00000505971 IFT57Q9NWB7 429 aa26.48■■□□□ 1.83
TRIO-207ENST00000505971 LRRC37AA6NMS7 1700 aa26.48■■□□□ 1.83
TRIO-207ENST00000505971 RASSF10A6NK89 507 aa26.46■■□□□ 1.83
TRIO-207ENST00000505971 VEGFBP49765 207 aa26.46■■□□□ 1.83
TRIO-207ENST00000505971 FAM89AQ96GI7 184 aa26.46■■□□□ 1.83
TRIO-207ENST00000505971 GPRC5DQ9NZD1 345 aa26.46■■□□□ 1.83
TRIO-207ENST00000505971 DUOX1Q9NRD9 1551 aa26.46■■□□□ 1.83
TRIO-207ENST00000505971 ATP5J2-PTCD1G3V325 749 aa26.45■■□□□ 1.82
TRIO-207ENST00000505971 GNAI1P63096 354 aa26.45■■□□□ 1.82
TRIO-207ENST00000505971 CALD1Q05682 793 aaKnown RBP26.43■■□□□ 1.82
TRIO-207ENST00000505971 TNS4Q8IZW8 715 aa26.43■■□□□ 1.82
TRIO-207ENST00000505971 ZNF428Q96B54 188 aa26.43■■□□□ 1.82
TRIO-207ENST00000505971 ADARB2Q9NS39 739 aaKnown RBP26.43■■□□□ 1.82
TRIO-207ENST00000505971 CELF1Q92879 486 aaKnown RBP26.42■■□□□ 1.82
TRIO-207ENST00000505971 TRPM7Q96QT4 1865 aa26.41■■□□□ 1.82
TRIO-207ENST00000505971 DEFB115Q30KQ5 88 aa26.41■■□□□ 1.82
TRIO-207ENST00000505971 CIAPIN1Q6FI81 312 aa26.41■■□□□ 1.82
TRIO-207ENST00000505971 PHAXQ9H814 394 aaKnown RBP26.41■■□□□ 1.82
TRIO-207ENST00000505971 PGAP2Q9UHJ9 254 aa26.41■■□□□ 1.82
TRIO-207ENST00000505971 COL4A1P02462 1669 aa26.41■■□□□ 1.82
TRIO-207ENST00000505971 CDHR2Q9BYE9 1310 aa26.4■■□□□ 1.82
TRIO-207ENST00000505971 YDJCA8MPS7 323 aa26.39■■□□□ 1.82
TRIO-207ENST00000505971 IRS4O14654 1257 aaPredicted RBP26.39■■□□□ 1.82
TRIO-207ENST00000505971 FOXN1O15353 648 aa26.39■■□□□ 1.82
TRIO-207ENST00000505971 GMPSP49915 693 aaPredicted RBP26.39■■□□□ 1.82
TRIO-207ENST00000505971 FMR1Q06787 632 aaKnown RBP eCLIP26.39■■□□□ 1.82
TRIO-207ENST00000505971 C8orf58Q8NAV2 365 aa26.39■■□□□ 1.82
TRIO-207ENST00000505971 ELL2O00472 640 aaPredicted RBP26.38■■□□□ 1.81
TRIO-207ENST00000505971 TNIP1Q15025 636 aa26.38■■□□□ 1.81
TRIO-207ENST00000505971 CST9Q5W186 159 aa26.38■■□□□ 1.81
TRIO-207ENST00000505971 RIC3Q7Z5B4 369 aa26.38■■□□□ 1.81
TRIO-207ENST00000505971 ZBTB38Q8NAP3 1195 aaPredicted RBP26.38■■□□□ 1.81
TRIO-207ENST00000505971 WBP1LQ9NX94 342 aa26.38■■□□□ 1.81
TRIO-207ENST00000505971 RAD17O75943 681 aa26.36■■□□□ 1.81
TRIO-207ENST00000505971 GOLGA2Q08379 1002 aa26.36■■□□□ 1.81
TRIO-207ENST00000505971 RTL5Q5HYW3 569 aaPredicted RBP26.36■■□□□ 1.81
TRIO-207ENST00000505971 NSFL1CQ9UNZ2 370 aaKnown RBP26.36■■□□□ 1.81
TRIO-207ENST00000505971 TRAF5O00463 557 aa26.35■■□□□ 1.81
TRIO-207ENST00000505971 HIRAP54198 1017 aaPredicted RBP26.35■■□□□ 1.81
TRIO-207ENST00000505971 RPS8P62241 208 aaKnown RBP26.35■■□□□ 1.81
TRIO-207ENST00000505971 CCDC191Q8NCU4 936 aa26.35■■□□□ 1.81
TRIO-207ENST00000505971 ZC3H15Q8WU90 426 aaKnown RBP26.35■■□□□ 1.81
TRIO-207ENST00000505971 POLLQ9UGP5 575 aa26.35■■□□□ 1.81
TRIO-207ENST00000505971 WDR33Q9C0J8 1336 aaKnown RBP26.35■■□□□ 1.81
TRIO-207ENST00000505971 WASHC4Q2M389 1173 aa26.34■■□□□ 1.81
TRIO-207ENST00000505971 CCDC184Q52MB2 194 aa26.34■■□□□ 1.81
TRIO-207ENST00000505971 CHMP4AQ9BY43 222 aa26.34■■□□□ 1.81
TRIO-207ENST00000505971 PRDM10Q9NQV6 1147 aa26.34■■□□□ 1.81
TRIO-207ENST00000505971 GPSM2P81274 684 aa26.33■■□□□ 1.81
TRIO-207ENST00000505971 ABT1Q9ULW3 272 aaKnown RBP26.33■■□□□ 1.81
TRIO-207ENST00000505971 PCCAP05165 728 aaPredicted RBP26.32■■□□□ 1.8
TRIO-207ENST00000505971 CCDC27Q2M243 656 aa26.32■■□□□ 1.8
TRIO-207ENST00000505971 CCDC30Q5VVM6 783 aa26.32■■□□□ 1.8
TRIO-207ENST00000505971 TSPYL6Q8N831 410 aa26.32■■□□□ 1.8
TRIO-207ENST00000505971 DPF2Q92785 391 aa26.32■■□□□ 1.8
TRIO-207ENST00000505971 MYD88Q99836 296 aa26.32■■□□□ 1.8
TRIO-207ENST00000505971 METTL22Q9BUU2 404 aaPredicted RBP26.32■■□□□ 1.8
TRIO-207ENST00000505971 BCL2L13Q9BXK5 485 aa26.32■■□□□ 1.8
TRIO-207ENST00000505971 CNOT7Q9UIV1 285 aaKnown RBP26.32■■□□□ 1.8
TRIO-207ENST00000505971 HSP90B1P14625 803 aaKnown RBP26.31■■□□□ 1.8
TRIO-207ENST00000505971 CTCFP49711 727 aaPredicted RBP26.31■■□□□ 1.8
TRIO-207ENST00000505971 PODXL2Q9NZ53 605 aa26.31■■□□□ 1.8
TRIO-207ENST00000505971 TLL2Q9Y6L7 1015 aa26.31■■□□□ 1.8
TRIO-207ENST00000505971 THSD7BQ9C0I4 1608 aa26.31■■□□□ 1.8
TRIO-207ENST00000505971 TBC1D16Q8TBP0 767 aa26.3■■□□□ 1.8
TRIO-207ENST00000505971 SEC31BQ9NQW1 1179 aa26.3■■□□□ 1.8
TRIO-207ENST00000505971 SHTN1A0MZ66 631 aa26.29■■□□□ 1.8
TRIO-207ENST00000505971 TRPM4Q8TD43 1214 aa26.29■■□□□ 1.8
TRIO-207ENST00000505971 AIDAQ96BJ3 306 aa26.29■■□□□ 1.8
TRIO-207ENST00000505971 DBNDD1Q9H9R9 158 aa26.29■■□□□ 1.8
TRIO-207ENST00000505971 CWC25Q9NXE8 425 aaPredicted RBP26.29■■□□□ 1.8
TRIO-207ENST00000505971 C6orf229H3BNL8 230 aa26.28■■□□□ 1.8
TRIO-207ENST00000505971 PSMD14O00487 310 aa26.28■■□□□ 1.8
TRIO-207ENST00000505971 PDE8AO60658 829 aa26.28■■□□□ 1.8
TRIO-207ENST00000505971 DDX58O95786 925 aaKnown RBP26.28■■□□□ 1.8
TRIO-207ENST00000505971 MAP2K1Q02750 393 aaPredicted RBP26.28■■□□□ 1.8
TRIO-207ENST00000505971 NCBP3Q53F19 620 aaKnown RBP26.28■■□□□ 1.8
TRIO-207ENST00000505971 EYA3Q99504 573 aa26.28■■□□□ 1.8
TRIO-207ENST00000505971 GLIS2Q9BZE0 524 aaPredicted RBP26.28■■□□□ 1.8
TRIO-207ENST00000505971 ZBTB12Q9Y330 459 aaPredicted RBP26.28■■□□□ 1.8
TRIO-207ENST00000505971 H7C1D1 291 aa26.27■■□□□ 1.8
TRIO-207ENST00000505971 RIMBP2O15034 1052 aa26.27■■□□□ 1.8
TRIO-207ENST00000505971 CAPNS2Q96L46 248 aa26.27■■□□□ 1.8
TRIO-207ENST00000505971 SCN9AQ15858 1988 aa26.27■■□□□ 1.8
TRIO-207ENST00000505971 POLR2AP24928 1970 aaKnown RBP26.26■■□□□ 1.79
TRIO-207ENST00000505971 RTL9Q8NET4 1388 aa26.26■■□□□ 1.79
TRIO-207ENST00000505971 ECE1P42892 770 aa26.26■■□□□ 1.79
TRIO-207ENST00000505971 CCDC152Q4G0S7 254 aa26.26■■□□□ 1.79
TRIO-207ENST00000505971 KSR2Q6VAB6 950 aa26.26■■□□□ 1.79
TRIO-207ENST00000505971 CDC37L1Q7L3B6 337 aa26.26■■□□□ 1.79
TRIO-207ENST00000505971 SAPCD2Q86UD0 394 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms