RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
RNF4-206ENST00000504782 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
RNF4-206ENST00000504782 WWC1Q8IX03 1113 aa16.56■□□□□ 0.24
RNF4-206ENST00000504782 MYD88Q99836 296 aa16.56■□□□□ 0.24
RNF4-206ENST00000504782 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
RNF4-206ENST00000504782 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
RNF4-206ENST00000504782 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
RNF4-206ENST00000504782 TRIM28Q13263 835 aaKnown RBP16.55■□□□□ 0.24
RNF4-206ENST00000504782 MAP1SQ66K74 1059 aaPredicted RBP16.55■□□□□ 0.24
RNF4-206ENST00000504782 DPP8Q6V1X1 898 aaPredicted RBP16.55■□□□□ 0.24
RNF4-206ENST00000504782 NIM1KQ8IY84 436 aa16.55■□□□□ 0.24
RNF4-206ENST00000504782 MPNDQ8N594 471 aa16.55■□□□□ 0.24
RNF4-206ENST00000504782 IRS4O14654 1257 aaPredicted RBP16.54■□□□□ 0.24
RNF4-206ENST00000504782 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
RNF4-206ENST00000504782 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
RNF4-206ENST00000504782 PCNTO95613 3336 aa16.53■□□□□ 0.24
RNF4-206ENST00000504782 FMR1Q06787 632 aaKnown RBP eCLIP16.53■□□□□ 0.24
RNF4-206ENST00000504782 CXCL9Q07325 125 aa16.53■□□□□ 0.24
RNF4-206ENST00000504782 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
RNF4-206ENST00000504782 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
RNF4-206ENST00000504782 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
RNF4-206ENST00000504782 MKRN1Q9UHC7 482 aaKnown RBP16.53■□□□□ 0.24
RNF4-206ENST00000504782 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
RNF4-206ENST00000504782 KIAA2012Q0VF49 1180 aa16.52■□□□□ 0.24
RNF4-206ENST00000504782 CCDC27Q2M243 656 aa16.52■□□□□ 0.24
RNF4-206ENST00000504782 CCDC30Q5VVM6 783 aa16.52■□□□□ 0.24
RNF4-206ENST00000504782 G2E3Q7L622 706 aa16.52■□□□□ 0.24
RNF4-206ENST00000504782 ZBTB38Q8NAP3 1195 aaPredicted RBP16.52■□□□□ 0.24
RNF4-206ENST00000504782 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
RNF4-206ENST00000504782 YDJCA8MPS7 323 aa16.51■□□□□ 0.23
RNF4-206ENST00000504782 GPSM2P81274 684 aa16.51■□□□□ 0.23
RNF4-206ENST00000504782 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
RNF4-206ENST00000504782 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
RNF4-206ENST00000504782 SUPT20HQ8NEM7 779 aa16.51■□□□□ 0.23
RNF4-206ENST00000504782 GPR101Q96P66 508 aaPredicted RBP16.51■□□□□ 0.23
RNF4-206ENST00000504782 METTL22Q9BUU2 404 aaPredicted RBP16.51■□□□□ 0.23
RNF4-206ENST00000504782 ZNRF3Q9ULT6 936 aa16.51■□□□□ 0.23
RNF4-206ENST00000504782 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
RNF4-206ENST00000504782 ANP32CO43423 234 aa16.5■□□□□ 0.23
RNF4-206ENST00000504782 RAD17O75943 681 aa16.5■□□□□ 0.23
RNF4-206ENST00000504782 LMOD1P29536 600 aaPredicted RBP16.5■□□□□ 0.23
RNF4-206ENST00000504782 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
RNF4-206ENST00000504782 VPS33BQ9H267 617 aa16.5■□□□□ 0.23
RNF4-206ENST00000504782 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
RNF4-206ENST00000504782 NSFL1CQ9UNZ2 370 aaKnown RBP16.5■□□□□ 0.23
RNF4-206ENST00000504782 SPEF2Q9C093 1822 aa16.49■□□□□ 0.23
RNF4-206ENST00000504782 SHTN1A0MZ66 631 aa16.49■□□□□ 0.23
RNF4-206ENST00000504782 PI4KAP2A4QPH2 592 aa16.49■□□□□ 0.23
RNF4-206ENST00000504782 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
RNF4-206ENST00000504782 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
RNF4-206ENST00000504782 IGKV5-2P06315 115 aa16.49■□□□□ 0.23
RNF4-206ENST00000504782 GMPSP49915 693 aaPredicted RBP16.49■□□□□ 0.23
RNF4-206ENST00000504782 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
RNF4-206ENST00000504782 COL13A1Q5TAT6 717 aaPredicted RBP16.49■□□□□ 0.23
RNF4-206ENST00000504782 PI4KAP1Q8N8J0 262 aa16.49■□□□□ 0.23
RNF4-206ENST00000504782 CCDC191Q8NCU4 936 aa16.49■□□□□ 0.23
RNF4-206ENST00000504782 HSPA1AP0DMV8 641 aaKnown RBP16.48■□□□□ 0.23
RNF4-206ENST00000504782 HSPA1BP0DMV9 641 aaKnown RBP16.48■□□□□ 0.23
RNF4-206ENST00000504782 RPS8P62241 208 aaKnown RBP16.48■□□□□ 0.23
RNF4-206ENST00000504782 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
RNF4-206ENST00000504782 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
RNF4-206ENST00000504782 CWC25Q9NXE8 425 aaPredicted RBP16.48■□□□□ 0.23
RNF4-206ENST00000504782 GPRC5DQ9NZD1 345 aa16.48■□□□□ 0.23
RNF4-206ENST00000504782 MYH3P11055 1940 aa16.47■□□□□ 0.23
RNF4-206ENST00000504782 TMEM88BA6NKF7 163 aa16.47■□□□□ 0.23
RNF4-206ENST00000504782 CWF19L2Q2TBE0 894 aaKnown RBP16.47■□□□□ 0.23
RNF4-206ENST00000504782 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
RNF4-206ENST00000504782 TMC4Q7Z404 712 aa16.47■□□□□ 0.23
RNF4-206ENST00000504782 DBNDD1Q9H9R9 158 aa16.47■□□□□ 0.23
RNF4-206ENST00000504782 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
RNF4-206ENST00000504782 SCN9AQ15858 1988 aa16.47■□□□□ 0.23
RNF4-206ENST00000504782 CNTNAP1P78357 1384 aa16.47■□□□□ 0.23
RNF4-206ENST00000504782 IL16Q14005 1332 aa16.46■□□□□ 0.23
RNF4-206ENST00000504782 FANCIQ9NVI1 1328 aa16.46■□□□□ 0.23
RNF4-206ENST00000504782 TRPM7Q96QT4 1865 aa16.46■□□□□ 0.23
RNF4-206ENST00000504782 C6orf229H3BNL8 230 aa16.46■□□□□ 0.23
RNF4-206ENST00000504782 TRAF5O00463 557 aa16.46■□□□□ 0.23
RNF4-206ENST00000504782 DDX58O95786 925 aaKnown RBP16.46■□□□□ 0.23
RNF4-206ENST00000504782 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
RNF4-206ENST00000504782 DOK7Q18PE1 504 aa16.46■□□□□ 0.23
RNF4-206ENST00000504782 WASHC4Q2M389 1173 aa16.46■□□□□ 0.23
RNF4-206ENST00000504782 USP50Q70EL3 339 aaPredicted RBP16.46■□□□□ 0.23
RNF4-206ENST00000504782 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
RNF4-206ENST00000504782 PDE8AO60658 829 aa16.45■□□□□ 0.22
RNF4-206ENST00000504782 VEGFBP49765 207 aa16.45■□□□□ 0.22
RNF4-206ENST00000504782 HIRAP54198 1017 aaPredicted RBP16.45■□□□□ 0.22
RNF4-206ENST00000504782 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
RNF4-206ENST00000504782 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
RNF4-206ENST00000504782 PSMD14O00487 310 aa16.44■□□□□ 0.22
RNF4-206ENST00000504782 VAMP4O75379 141 aa16.44■□□□□ 0.22
RNF4-206ENST00000504782 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
RNF4-206ENST00000504782 FAM9BQ8IZU0 186 aa16.44■□□□□ 0.22
RNF4-206ENST00000504782 TRPM4Q8TD43 1214 aa16.44■□□□□ 0.22
RNF4-206ENST00000504782 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
RNF4-206ENST00000504782 ADARB2Q9NS39 739 aaKnown RBP16.44■□□□□ 0.22
RNF4-206ENST00000504782 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
RNF4-206ENST00000504782 NEURL1BA8MQ27 555 aa16.43■□□□□ 0.22
RNF4-206ENST00000504782 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
RNF4-206ENST00000504782 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
RNF4-206ENST00000504782 CST9Q5W186 159 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms