RNA–Protein interactions for RNA: ENST00000504758.5

TCP11-219, Transcript of t-complex 11, human

TSL 1 (best)

Gene TCP11, Length 1,978 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCP11-219	ENST00000504758	PPIP5K2	O43314	1243 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	SF3B3	Q15393	1217 aa	Known RBP	13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	GRIPAP1	Q4V328	841 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	G2E3	Q7L622	706 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	SP8	Q8IXZ3	490 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	KLRG1	Q96E93	195 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	GJA3	Q9Y6H8	435 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	CACNA1F	O60840	1977 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	IL16	Q14005	1332 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	TWISTNB	Q3B726	338 aa	Predicted RBP	13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	HACL1	Q9UJ83	578 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	MAP3K2	Q9Y2U5	619 aa		13.43	□□□□□ -0.26
TCP11-219	ENST00000504758	SPEF2	Q9C093	1822 aa		13.42	□□□□□ -0.26
TCP11-219	ENST00000504758	EPHX2	P34913	555 aa		13.42	□□□□□ -0.26
TCP11-219	ENST00000504758	SCNN1D	P51172	638 aa		13.42	□□□□□ -0.26
TCP11-219	ENST00000504758	EAPP	Q56P03	285 aa	Predicted RBP	13.42	□□□□□ -0.26
TCP11-219	ENST00000504758	DPP8	Q6V1X1	898 aa	Predicted RBP	13.42	□□□□□ -0.26
TCP11-219	ENST00000504758	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.42	□□□□□ -0.26
TCP11-219	ENST00000504758	METTL22	Q9BUU2	404 aa	Predicted RBP	13.42	□□□□□ -0.26
TCP11-219	ENST00000504758	PI4KAP2	A4QPH2	592 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	IGKV5-2	P06315	115 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	LDHD	Q86WU2	507 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	NIM1K	Q8IY84	436 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	MPND	Q8N594	471 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	PI4KAP1	Q8N8J0	262 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	EIF6	P56537	245 aa	Known RBP	13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	NCBP3	Q53F19	620 aa	Known RBP	13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	FAM9B	Q8IZU0	186 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	CCDC191	Q8NCU4	936 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	SEC31B	Q9NQW1	1179 aa		13.41	□□□□□ -0.26
TCP11-219	ENST00000504758	SCN9A	Q15858	1988 aa		13.4	□□□□□ -0.26
TCP11-219	ENST00000504758	EPS15	P42566	896 aa		13.4	□□□□□ -0.26
TCP11-219	ENST00000504758	KIAA2012	Q0VF49	1180 aa		13.4	□□□□□ -0.26
TCP11-219	ENST00000504758	KSR2	Q6VAB6	950 aa		13.4	□□□□□ -0.26
TCP11-219	ENST00000504758	CWC25	Q9NXE8	425 aa	Predicted RBP	13.4	□□□□□ -0.26
TCP11-219	ENST00000504758	PASK	Q96RG2	1323 aa		13.4	□□□□□ -0.26
TCP11-219	ENST00000504758	DDX58	O95786	925 aa	Known RBP	13.4	□□□□□ -0.27
TCP11-219	ENST00000504758	ITGBL1	O95965	494 aa	Predicted RBP	13.4	□□□□□ -0.27
TCP11-219	ENST00000504758	PCCA	P05165	728 aa	Predicted RBP	13.4	□□□□□ -0.27
TCP11-219	ENST00000504758	CXCL9	Q07325	125 aa		13.4	□□□□□ -0.27
TCP11-219	ENST00000504758	CWF19L2	Q2TBE0	894 aa	Known RBP	13.4	□□□□□ -0.27
TCP11-219	ENST00000504758	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.4	□□□□□ -0.27
TCP11-219	ENST00000504758	TMX4	Q9H1E5	349 aa	Predicted RBP	13.4	□□□□□ -0.27
TCP11-219	ENST00000504758	YDJC	A8MPS7	323 aa		13.39	□□□□□ -0.27
TCP11-219	ENST00000504758	SLC4A2	P04920	1241 aa		13.39	□□□□□ -0.27
TCP11-219	ENST00000504758	JMY	Q8N9B5	988 aa		13.39	□□□□□ -0.27
TCP11-219	ENST00000504758	STK31	Q9BXU1	1019 aa		13.39	□□□□□ -0.27
TCP11-219	ENST00000504758	GPSM2	P81274	684 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	EXOSC9	Q06265	439 aa	Known RBP	13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	MAP1S	Q66K74	1059 aa	Predicted RBP	13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	WDR63	Q8IWG1	891 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	SUPT20H	Q8NEM7	779 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	GPR101	Q96P66	508 aa	Predicted RBP	13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	POLL	Q9UGP5	575 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	ZNRF3	Q9ULT6	936 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	VAMP4	O75379	141 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	RPS8	P62241	208 aa	Known RBP	13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	TMC4	Q7Z404	712 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	VPS33B	Q9H267	617 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	CLEC11A	Q9Y240	323 aa		13.38	□□□□□ -0.27
TCP11-219	ENST00000504758	RAD17	O75943	681 aa		13.37	□□□□□ -0.27
TCP11-219	ENST00000504758	FLII	Q13045	1269 aa		13.37	□□□□□ -0.27
TCP11-219	ENST00000504758	NEURL1B	A8MQ27	555 aa		13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	PDE8A	O60658	829 aa		13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	GMPS	P49915	693 aa	Predicted RBP	13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	FMR1	Q06787	632 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	PNMA8A	Q86V59	439 aa	Predicted RBP	13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	CHMP4A	Q9BY43	222 aa		13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	CREBZF	Q9NS37	354 aa		13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	SHTN1	A0MZ66	631 aa		13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	LMOD1	P29536	600 aa	Predicted RBP	13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	DBNDD1	Q9H9R9	158 aa		13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	GPRC5D	Q9NZD1	345 aa		13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	CDHR2	Q9BYE9	1310 aa		13.36	□□□□□ -0.27
TCP11-219	ENST00000504758	TRPM7	Q96QT4	1865 aa		13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	RIMBP2	O15034	1052 aa		13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	CCDC152	Q4G0S7	254 aa		13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	CIAPIN1	Q6FI81	312 aa		13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	CNTROB	Q8N137	903 aa		13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	TBC1D16	Q8TBP0	767 aa		13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	KCNQ5	Q9NR82	932 aa		13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	MKRN1	Q9UHC7	482 aa	Known RBP	13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	PSME4	Q14997	1843 aa		13.35	□□□□□ -0.27
TCP11-219	ENST00000504758	C6orf229	H3BNL8	230 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	CTSW	P56202	376 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	FKBP5	Q13451	457 aa	Predicted RBP	13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	WASHC4	Q2M389	1173 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	UBE3B	Q7Z3V4	1068 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	ZNF521	Q96K83	1311 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	WTIP	A6NIX2	430 aa	Predicted RBP	13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	NEXN	Q0ZGT2	675 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	TTLL11	Q8NHH1	800 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	GREM2	Q9H772	168 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	RTL9	Q8NET4	1388 aa		13.34	□□□□□ -0.27
TCP11-219	ENST00000504758	POLR2A	P24928	1970 aa	Known RBP	13.33	□□□□□ -0.28
TCP11-219	ENST00000504758	CASP7	P55210	303 aa		13.33	□□□□□ -0.28
TCP11-219	ENST00000504758	DOK7	Q18PE1	504 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms