RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 EIF6P56537 245 aaKnown RBP29.28■■■□□ 2.28
CDC42SE2-207ENST00000504701 GRIPAP1Q4V328 841 aa29.28■■■□□ 2.28
CDC42SE2-207ENST00000504701 LDHDQ86WU2 507 aa29.28■■■□□ 2.28
CDC42SE2-207ENST00000504701 PCNTO95613 3336 aa29.27■■■□□ 2.28
CDC42SE2-207ENST00000504701 IRS4O14654 1257 aaPredicted RBP29.27■■■□□ 2.28
CDC42SE2-207ENST00000504701 TRIM28Q13263 835 aaKnown RBP29.27■■■□□ 2.28
CDC42SE2-207ENST00000504701 CCDC27Q2M243 656 aa29.27■■■□□ 2.28
CDC42SE2-207ENST00000504701 NIM1KQ8IY84 436 aa29.27■■■□□ 2.28
CDC42SE2-207ENST00000504701 RTFDC1Q9BY42 306 aaPredicted RBP29.27■■■□□ 2.28
CDC42SE2-207ENST00000504701 CCDC30Q5VVM6 783 aa29.26■■■□□ 2.27
CDC42SE2-207ENST00000504701 DPP8Q6V1X1 898 aaPredicted RBP29.26■■■□□ 2.27
CDC42SE2-207ENST00000504701 MPNDQ8N594 471 aa29.26■■■□□ 2.27
CDC42SE2-207ENST00000504701 JMYQ8N9B5 988 aa29.26■■■□□ 2.27
CDC42SE2-207ENST00000504701 SCNN1DP51172 638 aa29.25■■■□□ 2.27
CDC42SE2-207ENST00000504701 SF3B3Q15393 1217 aaKnown RBP29.25■■■□□ 2.27
CDC42SE2-207ENST00000504701 EPS15P42566 896 aa29.24■■■□□ 2.27
CDC42SE2-207ENST00000504701 G2E3Q7L622 706 aa29.24■■■□□ 2.27
CDC42SE2-207ENST00000504701 TMX4Q9H1E5 349 aaPredicted RBP29.24■■■□□ 2.27
CDC42SE2-207ENST00000504701 CLEC11AQ9Y240 323 aa29.24■■■□□ 2.27
CDC42SE2-207ENST00000504701 PASKQ96RG2 1323 aa29.23■■■□□ 2.27
CDC42SE2-207ENST00000504701 ITGBL1O95965 494 aaPredicted RBP29.22■■■□□ 2.27
CDC42SE2-207ENST00000504701 MAP1SQ66K74 1059 aaPredicted RBP29.22■■■□□ 2.27
CDC42SE2-207ENST00000504701 ZBTB38Q8NAP3 1195 aaPredicted RBP29.22■■■□□ 2.27
CDC42SE2-207ENST00000504701 METTL22Q9BUU2 404 aaPredicted RBP29.22■■■□□ 2.27
CDC42SE2-207ENST00000504701 MAP3K2Q9Y2U5 619 aa29.22■■■□□ 2.27
CDC42SE2-207ENST00000504701 CXCL9Q07325 125 aa29.21■■■□□ 2.27
CDC42SE2-207ENST00000504701 TWISTNBQ3B726 338 aaPredicted RBP29.21■■■□□ 2.27
CDC42SE2-207ENST00000504701 SEC31BQ9NQW1 1179 aa29.21■■■□□ 2.27
CDC42SE2-207ENST00000504701 KIAA2012Q0VF49 1180 aa29.2■■■□□ 2.26
CDC42SE2-207ENST00000504701 SUPT20HQ8NEM7 779 aa29.2■■■□□ 2.26
CDC42SE2-207ENST00000504701 CCDC85AQ96PX6 553 aaPredicted RBP29.2■■■□□ 2.26
CDC42SE2-207ENST00000504701 FANCIQ9NVI1 1328 aa29.2■■■□□ 2.26
CDC42SE2-207ENST00000504701 GPR101Q96P66 508 aaPredicted RBP29.19■■■□□ 2.26
CDC42SE2-207ENST00000504701 MKRN1Q9UHC7 482 aaKnown RBP29.19■■■□□ 2.26
CDC42SE2-207ENST00000504701 ZNRF3Q9ULT6 936 aa29.19■■■□□ 2.26
CDC42SE2-207ENST00000504701 PI4KAP2A4QPH2 592 aa29.18■■■□□ 2.26
CDC42SE2-207ENST00000504701 YDJCA8MPS7 323 aa29.18■■■□□ 2.26
CDC42SE2-207ENST00000504701 IGKV5-2P06315 115 aa29.18■■■□□ 2.26
CDC42SE2-207ENST00000504701 GPSM2P81274 684 aa29.18■■■□□ 2.26
CDC42SE2-207ENST00000504701 PI4KAP1Q8N8J0 262 aa29.18■■■□□ 2.26
CDC42SE2-207ENST00000504701 CCDC191Q8NCU4 936 aa29.18■■■□□ 2.26
CDC42SE2-207ENST00000504701 CREBZFQ9NS37 354 aa29.18■■■□□ 2.26
CDC42SE2-207ENST00000504701 CWC25Q9NXE8 425 aaPredicted RBP29.18■■■□□ 2.26
CDC42SE2-207ENST00000504701 RAD17O75943 681 aa29.17■■■□□ 2.26
CDC42SE2-207ENST00000504701 PCCAP05165 728 aaPredicted RBP29.17■■■□□ 2.26
CDC42SE2-207ENST00000504701 FMR1Q06787 632 aaKnown RBP eCLIP29.17■■■□□ 2.26
CDC42SE2-207ENST00000504701 SPINK5Q9NQ38 1064 aaPredicted RBP29.17■■■□□ 2.26
CDC42SE2-207ENST00000504701 IL16Q14005 1332 aa29.17■■■□□ 2.26
CDC42SE2-207ENST00000504701 DDX58O95786 925 aaKnown RBP29.16■■■□□ 2.26
CDC42SE2-207ENST00000504701 LMOD1P29536 600 aaPredicted RBP29.16■■■□□ 2.26
CDC42SE2-207ENST00000504701 PNMA8AQ86V59 439 aaPredicted RBP29.16■■■□□ 2.26
CDC42SE2-207ENST00000504701 VPS33BQ9H267 617 aa29.16■■■□□ 2.26
CDC42SE2-207ENST00000504701 POLLQ9UGP5 575 aa29.16■■■□□ 2.26
CDC42SE2-207ENST00000504701 NSFL1CQ9UNZ2 370 aaKnown RBP29.16■■■□□ 2.26
CDC42SE2-207ENST00000504701 CWF19L2Q2TBE0 894 aaKnown RBP29.15■■■□□ 2.26
CDC42SE2-207ENST00000504701 KSR2Q6VAB6 950 aa29.15■■■□□ 2.26
CDC42SE2-207ENST00000504701 CNTROBQ8N137 903 aa29.15■■■□□ 2.26
CDC42SE2-207ENST00000504701 SHTN1A0MZ66 631 aa29.14■■■□□ 2.26
CDC42SE2-207ENST00000504701 GMPSP49915 693 aaPredicted RBP29.14■■■□□ 2.26
CDC42SE2-207ENST00000504701 TMC4Q7Z404 712 aa29.14■■■□□ 2.26
CDC42SE2-207ENST00000504701 FAM9BQ8IZU0 186 aa29.14■■■□□ 2.26
CDC42SE2-207ENST00000504701 STK31Q9BXU1 1019 aa29.14■■■□□ 2.26
CDC42SE2-207ENST00000504701 SPEF2Q9C093 1822 aa29.13■■■□□ 2.25
CDC42SE2-207ENST00000504701 RIMBP2O15034 1052 aa29.13■■■□□ 2.25
CDC42SE2-207ENST00000504701 SLC4A2P04920 1241 aa29.13■■■□□ 2.25
CDC42SE2-207ENST00000504701 RPS8P62241 208 aaKnown RBP29.13■■■□□ 2.25
CDC42SE2-207ENST00000504701 DBNDD1Q9H9R9 158 aa29.13■■■□□ 2.25
CDC42SE2-207ENST00000504701 GPRC5DQ9NZD1 345 aa29.13■■■□□ 2.25
CDC42SE2-207ENST00000504701 CIAPIN1Q6FI81 312 aa29.12■■■□□ 2.25
CDC42SE2-207ENST00000504701 PDE8AO60658 829 aa29.11■■■□□ 2.25
CDC42SE2-207ENST00000504701 EXOSC9Q06265 439 aaKnown RBP29.11■■■□□ 2.25
CDC42SE2-207ENST00000504701 NCBP3Q53F19 620 aaKnown RBP29.11■■■□□ 2.25
CDC42SE2-207ENST00000504701 MYH3P11055 1940 aa29.11■■■□□ 2.25
CDC42SE2-207ENST00000504701 C6orf229H3BNL8 230 aa29.1■■■□□ 2.25
CDC42SE2-207ENST00000504701 WASHC4Q2M389 1173 aa29.1■■■□□ 2.25
CDC42SE2-207ENST00000504701 KCNQ5Q9NR82 932 aa29.1■■■□□ 2.25
CDC42SE2-207ENST00000504701 DOK7Q18PE1 504 aa29.09■■■□□ 2.25
CDC42SE2-207ENST00000504701 IFFO2Q5TF58 517 aa29.09■■■□□ 2.25
CDC42SE2-207ENST00000504701 TBC1D16Q8TBP0 767 aa29.09■■■□□ 2.25
CDC42SE2-207ENST00000504701 SCN9AQ15858 1988 aa29.09■■■□□ 2.25
CDC42SE2-207ENST00000504701 CNTNAP1P78357 1384 aa29.09■■■□□ 2.25
CDC42SE2-207ENST00000504701 TMEM88BA6NKF7 163 aa29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 NEURL1BA8MQ27 555 aa29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 VAMP4O75379 141 aa29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 HSPA1AP0DMV8 641 aaKnown RBP29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 HSPA1BP0DMV9 641 aaKnown RBP29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 CCDC152Q4G0S7 254 aa29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 WDR63Q8IWG1 891 aa29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 ZBTB12Q9Y330 459 aaPredicted RBP29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 CDHR2Q9BYE9 1310 aa29.08■■■□□ 2.25
CDC42SE2-207ENST00000504701 TRAF5O00463 557 aa29.07■■■□□ 2.24
CDC42SE2-207ENST00000504701 FLIIQ13045 1269 aa29.07■■■□□ 2.24
CDC42SE2-207ENST00000504701 USP50Q70EL3 339 aaPredicted RBP29.07■■■□□ 2.24
CDC42SE2-207ENST00000504701 CHMP4AQ9BY43 222 aa29.07■■■□□ 2.24
CDC42SE2-207ENST00000504701 ADARB2Q9NS39 739 aaKnown RBP29.07■■■□□ 2.24
CDC42SE2-207ENST00000504701 TRPM4Q8TD43 1214 aa29.06■■■□□ 2.24
CDC42SE2-207ENST00000504701 WTIPA6NIX2 430 aaPredicted RBP29.05■■■□□ 2.24
CDC42SE2-207ENST00000504701 PSMD14O00487 310 aa29.05■■■□□ 2.24
CDC42SE2-207ENST00000504701 CTSWP56202 376 aa29.05■■■□□ 2.24
CDC42SE2-207ENST00000504701 COL13A1Q5TAT6 717 aaPredicted RBP29.05■■■□□ 2.24
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