RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 CCER2I3L3R5 266 aa23.13■■□□□ 1.29
SH3TC1-208ENST00000504223 DDX58O95786 925 aaKnown RBP23.13■■□□□ 1.29
SH3TC1-208ENST00000504223 IGKV5-2P06315 115 aa23.13■■□□□ 1.29
SH3TC1-208ENST00000504223 SP8Q8IXZ3 490 aa23.13■■□□□ 1.29
SH3TC1-208ENST00000504223 ZBTB38Q8NAP3 1195 aaPredicted RBP23.13■■□□□ 1.29
SH3TC1-208ENST00000504223 JARID2Q92833 1246 aaPredicted RBP23.13■■□□□ 1.29
SH3TC1-208ENST00000504223 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
SH3TC1-208ENST00000504223 JDP2Q8WYK2 163 aa23.12■■□□□ 1.29
SH3TC1-208ENST00000504223 RTFDC1Q9BY42 306 aaPredicted RBP23.12■■□□□ 1.29
SH3TC1-208ENST00000504223 IRS4O14654 1257 aaPredicted RBP23.11■■□□□ 1.29
SH3TC1-208ENST00000504223 FLIIQ13045 1269 aa23.11■■□□□ 1.29
SH3TC1-208ENST00000504223 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
SH3TC1-208ENST00000504223 MYH16Q9H6N6 1097 aa23.11■■□□□ 1.29
SH3TC1-208ENST00000504223 LRRC37AA6NMS7 1700 aa23.11■■□□□ 1.29
SH3TC1-208ENST00000504223 LARGE2Q8N3Y3 721 aa23.1■■□□□ 1.29
SH3TC1-208ENST00000504223 IQCA1LA6NCM1 817 aa23.09■■□□□ 1.29
SH3TC1-208ENST00000504223 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
SH3TC1-208ENST00000504223 TMC4Q7Z404 712 aa23.09■■□□□ 1.29
SH3TC1-208ENST00000504223 GPC2Q8N158 579 aa23.09■■□□□ 1.29
SH3TC1-208ENST00000504223 DNAJC5GQ8N7S2 189 aa23.09■■□□□ 1.29
SH3TC1-208ENST00000504223 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
SH3TC1-208ENST00000504223 VPS33BQ9H267 617 aa23.09■■□□□ 1.29
SH3TC1-208ENST00000504223 CWC25Q9NXE8 425 aaPredicted RBP23.09■■□□□ 1.29
SH3TC1-208ENST00000504223 POTEIP0CG38 1075 aa23.08■■□□□ 1.29
SH3TC1-208ENST00000504223 POTEJP0CG39 1038 aa23.08■■□□□ 1.29
SH3TC1-208ENST00000504223 CWF19L2Q2TBE0 894 aaKnown RBP23.08■■□□□ 1.29
SH3TC1-208ENST00000504223 DPP8Q6V1X1 898 aaPredicted RBP23.08■■□□□ 1.29
SH3TC1-208ENST00000504223 TAF1DQ9H5J8 278 aaPredicted RBP23.08■■□□□ 1.29
SH3TC1-208ENST00000504223 DUOX1Q9NRD9 1551 aa23.08■■□□□ 1.29
SH3TC1-208ENST00000504223 SCN4AP35499 1836 aa23.08■■□□□ 1.28
SH3TC1-208ENST00000504223 PPIP5K2O43314 1243 aa23.07■■□□□ 1.28
SH3TC1-208ENST00000504223 AOC3Q16853 763 aa23.07■■□□□ 1.28
SH3TC1-208ENST00000504223 MPNDQ8N594 471 aa23.07■■□□□ 1.28
SH3TC1-208ENST00000504223 MYH3P11055 1940 aa23.06■■□□□ 1.28
SH3TC1-208ENST00000504223 NEURL1BA8MQ27 555 aa23.06■■□□□ 1.28
SH3TC1-208ENST00000504223 HTRA3P83110 453 aa23.06■■□□□ 1.28
SH3TC1-208ENST00000504223 SUPT20HQ8NEM7 779 aa23.06■■□□□ 1.28
SH3TC1-208ENST00000504223 EIF6P56537 245 aaKnown RBP23.05■■□□□ 1.28
SH3TC1-208ENST00000504223 CHADLQ6NUI6 762 aa23.05■■□□□ 1.28
SH3TC1-208ENST00000504223 HACL1Q9UJ83 578 aa23.05■■□□□ 1.28
SH3TC1-208ENST00000504223 HSP90B1P14625 803 aaKnown RBP23.04■■□□□ 1.28
SH3TC1-208ENST00000504223 FKBP5Q13451 457 aaPredicted RBP23.04■■□□□ 1.28
SH3TC1-208ENST00000504223 NIM1KQ8IY84 436 aa23.04■■□□□ 1.28
SH3TC1-208ENST00000504223 CDCA7LQ96GN5 454 aa23.04■■□□□ 1.28
SH3TC1-208ENST00000504223 SEC31BQ9NQW1 1179 aa23.04■■□□□ 1.28
SH3TC1-208ENST00000504223 LTBP1Q14766 1721 aa23.04■■□□□ 1.28
SH3TC1-208ENST00000504223 CDHR2Q9BYE9 1310 aa23.04■■□□□ 1.28
SH3TC1-208ENST00000504223 KIAA2012Q0VF49 1180 aa23.03■■□□□ 1.28
SH3TC1-208ENST00000504223 DNAAF4Q8WXU2 420 aa23.03■■□□□ 1.28
SH3TC1-208ENST00000504223 ADAMTSL1Q8N6G6 1762 aa23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 F6X3S4 739 aa23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 PDE8AO60658 829 aa23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 EPHX2P34913 555 aa23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 SLFN5Q08AF3 891 aa23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 NEXNQ0ZGT2 675 aa23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 LDHDQ86WU2 507 aa23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 CCDC85AQ96PX6 553 aaPredicted RBP23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 GJA3Q9Y6H8 435 aa23.02■■□□□ 1.28
SH3TC1-208ENST00000504223 RPS8P62241 208 aaKnown RBP23.01■■□□□ 1.27
SH3TC1-208ENST00000504223 MIER1Q8N108 512 aa23.01■■□□□ 1.27
SH3TC1-208ENST00000504223 ZNRF3Q9ULT6 936 aa23.01■■□□□ 1.27
SH3TC1-208ENST00000504223 E9PSI1 815 aa23■■□□□ 1.27
SH3TC1-208ENST00000504223 H7C1W4 665 aa23■■□□□ 1.27
SH3TC1-208ENST00000504223 SCNN1DP51172 638 aa23■■□□□ 1.27
SH3TC1-208ENST00000504223 CASP7P55210 303 aa23■■□□□ 1.27
SH3TC1-208ENST00000504223 CCDC152Q4G0S7 254 aa23■■□□□ 1.27
SH3TC1-208ENST00000504223 GPSM2P81274 684 aa22.99■■□□□ 1.27
SH3TC1-208ENST00000504223 GCKRQ14397 625 aa22.99■■□□□ 1.27
SH3TC1-208ENST00000504223 DIEXFQ68CQ4 756 aaKnown RBP22.99■■□□□ 1.27
SH3TC1-208ENST00000504223 UBE3BQ7Z3V4 1068 aa22.99■■□□□ 1.27
SH3TC1-208ENST00000504223 NSFL1CQ9UNZ2 370 aaKnown RBP22.99■■□□□ 1.27
SH3TC1-208ENST00000504223 SPEF2Q9C093 1822 aa22.98■■□□□ 1.27
SH3TC1-208ENST00000504223 CTSWP56202 376 aa22.98■■□□□ 1.27
SH3TC1-208ENST00000504223 CXCL9Q07325 125 aa22.98■■□□□ 1.27
SH3TC1-208ENST00000504223 EAPPQ56P03 285 aaPredicted RBP22.98■■□□□ 1.27
SH3TC1-208ENST00000504223 PNMA8AQ86V59 439 aaPredicted RBP22.98■■□□□ 1.27
SH3TC1-208ENST00000504223 KLRG1Q96E93 195 aa22.98■■□□□ 1.27
SH3TC1-208ENST00000504223 BEND3Q5T5X7 828 aa22.97■■□□□ 1.27
SH3TC1-208ENST00000504223 TRMT2AQ8IZ69 625 aaKnown RBP22.97■■□□□ 1.27
SH3TC1-208ENST00000504223 LINS1Q8NG48 757 aa22.97■■□□□ 1.27
SH3TC1-208ENST00000504223 POLLQ9UGP5 575 aa22.97■■□□□ 1.27
SH3TC1-208ENST00000504223 PASKQ96RG2 1323 aa22.97■■□□□ 1.27
SH3TC1-208ENST00000504223 TTLL11Q8NHH1 800 aa22.96■■□□□ 1.27
SH3TC1-208ENST00000504223 PCNTO95613 3336 aa22.95■■□□□ 1.27
SH3TC1-208ENST00000504223 LMOD1P29536 600 aaPredicted RBP22.95■■□□□ 1.26
SH3TC1-208ENST00000504223 EPS15P42566 896 aa22.95■■□□□ 1.26
SH3TC1-208ENST00000504223 WASHC4Q2M389 1173 aa22.95■■□□□ 1.26
SH3TC1-208ENST00000504223 MRPL50Q8N5N7 158 aaKnown RBP22.95■■□□□ 1.26
SH3TC1-208ENST00000504223 TBC1D16Q8TBP0 767 aa22.95■■□□□ 1.26
SH3TC1-208ENST00000504223 PODXL2Q9NZ53 605 aa22.95■■□□□ 1.26
SH3TC1-208ENST00000504223 RTL9Q8NET4 1388 aa22.94■■□□□ 1.26
SH3TC1-208ENST00000504223 YDJCA8MPS7 323 aa22.94■■□□□ 1.26
SH3TC1-208ENST00000504223 ITGBL1O95965 494 aaPredicted RBP22.94■■□□□ 1.26
SH3TC1-208ENST00000504223 GREM2Q9H772 168 aa22.94■■□□□ 1.26
SH3TC1-208ENST00000504223 RAD17O75943 681 aa22.93■■□□□ 1.26
SH3TC1-208ENST00000504223 CIAPIN1Q6FI81 312 aa22.93■■□□□ 1.26
SH3TC1-208ENST00000504223 SSH1Q8WYL5 1049 aa22.93■■□□□ 1.26
SH3TC1-208ENST00000504223 GPR101Q96P66 508 aaPredicted RBP22.93■■□□□ 1.26
SH3TC1-208ENST00000504223 PLA2G12BQ9BX93 195 aa22.93■■□□□ 1.26
SH3TC1-208ENST00000504223 GPRC5DQ9NZD1 345 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms