RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 EPHX2P34913 555 aa25.06■■□□□ 1.6
UBE2D3-215ENST00000503418 TRIM28Q13263 835 aaKnown RBP25.06■■□□□ 1.6
UBE2D3-215ENST00000503418 MPNDQ8N594 471 aa25.06■■□□□ 1.6
UBE2D3-215ENST00000503418 SUPT20HQ8NEM7 779 aa25.06■■□□□ 1.6
UBE2D3-215ENST00000503418 IRS4O14654 1257 aaPredicted RBP25.05■■□□□ 1.6
UBE2D3-215ENST00000503418 DDX58O95786 925 aaKnown RBP25.05■■□□□ 1.6
UBE2D3-215ENST00000503418 SALL2Q9Y467 1007 aaPredicted RBP25.05■■□□□ 1.6
UBE2D3-215ENST00000503418 CLEC11AQ9Y240 323 aa25.04■■□□□ 1.6
UBE2D3-215ENST00000503418 SF3B3Q15393 1217 aaKnown RBP25.03■■□□□ 1.6
UBE2D3-215ENST00000503418 TWISTNBQ3B726 338 aaPredicted RBP25.03■■□□□ 1.6
UBE2D3-215ENST00000503418 ZBTB38Q8NAP3 1195 aaPredicted RBP25.03■■□□□ 1.6
UBE2D3-215ENST00000503418 STK31Q9BXU1 1019 aa25.03■■□□□ 1.6
UBE2D3-215ENST00000503418 RTFDC1Q9BY42 306 aaPredicted RBP25.03■■□□□ 1.6
UBE2D3-215ENST00000503418 VPS33BQ9H267 617 aa25.03■■□□□ 1.6
UBE2D3-215ENST00000503418 LRRC37AA6NMS7 1700 aa25.03■■□□□ 1.6
UBE2D3-215ENST00000503418 LMOD1P29536 600 aaPredicted RBP25.02■■□□□ 1.6
UBE2D3-215ENST00000503418 TMC4Q7Z404 712 aa25.02■■□□□ 1.6
UBE2D3-215ENST00000503418 IL16Q14005 1332 aa25.02■■□□□ 1.6
UBE2D3-215ENST00000503418 PNMA8AQ86V59 439 aaPredicted RBP25.01■■□□□ 1.59
UBE2D3-215ENST00000503418 CCDC191Q8NCU4 936 aa25.01■■□□□ 1.59
UBE2D3-215ENST00000503418 CELF1Q92879 486 aaKnown RBP25.01■■□□□ 1.59
UBE2D3-215ENST00000503418 METTL22Q9BUU2 404 aaPredicted RBP25.01■■□□□ 1.59
UBE2D3-215ENST00000503418 MAP3K2Q9Y2U5 619 aa25.01■■□□□ 1.59
UBE2D3-215ENST00000503418 LTBP1Q14766 1721 aa25■■□□□ 1.59
UBE2D3-215ENST00000503418 ADAMTSL1Q8N6G6 1762 aa25■■□□□ 1.59
UBE2D3-215ENST00000503418 CWC25Q9NXE8 425 aaPredicted RBP25■■□□□ 1.59
UBE2D3-215ENST00000503418 COL4A1P02462 1669 aa24.99■■□□□ 1.59
UBE2D3-215ENST00000503418 NCBP3Q53F19 620 aaKnown RBP24.99■■□□□ 1.59
UBE2D3-215ENST00000503418 JMYQ8N9B5 988 aa24.99■■□□□ 1.59
UBE2D3-215ENST00000503418 ZNRF3Q9ULT6 936 aa24.99■■□□□ 1.59
UBE2D3-215ENST00000503418 DUOX1Q9NRD9 1551 aa24.98■■□□□ 1.59
UBE2D3-215ENST00000503418 PCCAP05165 728 aaPredicted RBP24.98■■□□□ 1.59
UBE2D3-215ENST00000503418 HSP90B1P14625 803 aaKnown RBP24.98■■□□□ 1.59
UBE2D3-215ENST00000503418 SCNN1DP51172 638 aa24.98■■□□□ 1.59
UBE2D3-215ENST00000503418 KIAA2012Q0VF49 1180 aa24.98■■□□□ 1.59
UBE2D3-215ENST00000503418 JARID2Q92833 1246 aaPredicted RBP24.98■■□□□ 1.59
UBE2D3-215ENST00000503418 FANCIQ9NVI1 1328 aa24.97■■□□□ 1.59
UBE2D3-215ENST00000503418 PI4KAP2A4QPH2 592 aa24.97■■□□□ 1.59
UBE2D3-215ENST00000503418 EPS15P42566 896 aa24.97■■□□□ 1.59
UBE2D3-215ENST00000503418 KSR2Q6VAB6 950 aa24.97■■□□□ 1.59
UBE2D3-215ENST00000503418 FAM9BQ8IZU0 186 aa24.97■■□□□ 1.59
UBE2D3-215ENST00000503418 PI4KAP1Q8N8J0 262 aa24.97■■□□□ 1.59
UBE2D3-215ENST00000503418 CREBZFQ9NS37 354 aa24.97■■□□□ 1.59
UBE2D3-215ENST00000503418 NSFL1CQ9UNZ2 370 aaKnown RBP24.97■■□□□ 1.59
UBE2D3-215ENST00000503418 CXCL9Q07325 125 aa24.96■■□□□ 1.59
UBE2D3-215ENST00000503418 MAP1SQ66K74 1059 aaPredicted RBP24.96■■□□□ 1.59
UBE2D3-215ENST00000503418 PASKQ96RG2 1323 aa24.95■■□□□ 1.58
UBE2D3-215ENST00000503418 PDE8AO60658 829 aa24.95■■□□□ 1.58
UBE2D3-215ENST00000503418 SLC4A2P04920 1241 aa24.95■■□□□ 1.58
UBE2D3-215ENST00000503418 WDR63Q8IWG1 891 aa24.95■■□□□ 1.58
UBE2D3-215ENST00000503418 ITGBL1O95965 494 aaPredicted RBP24.94■■□□□ 1.58
UBE2D3-215ENST00000503418 RPS8P62241 208 aaKnown RBP24.94■■□□□ 1.58
UBE2D3-215ENST00000503418 NEXNQ0ZGT2 675 aa24.94■■□□□ 1.58
UBE2D3-215ENST00000503418 CCDC152Q4G0S7 254 aa24.94■■□□□ 1.58
UBE2D3-215ENST00000503418 G2E3Q7L622 706 aa24.94■■□□□ 1.58
UBE2D3-215ENST00000503418 CCDC85AQ96PX6 553 aaPredicted RBP24.94■■□□□ 1.58
UBE2D3-215ENST00000503418 SEC31BQ9NQW1 1179 aa24.94■■□□□ 1.58
UBE2D3-215ENST00000503418 C6orf229H3BNL8 230 aa24.93■■□□□ 1.58
UBE2D3-215ENST00000503418 RAD17O75943 681 aa24.93■■□□□ 1.58
UBE2D3-215ENST00000503418 GPSM2P81274 684 aa24.93■■□□□ 1.58
UBE2D3-215ENST00000503418 CIAPIN1Q6FI81 312 aa24.93■■□□□ 1.58
UBE2D3-215ENST00000503418 CNTROBQ8N137 903 aa24.93■■□□□ 1.58
UBE2D3-215ENST00000503418 IGKV5-2P06315 115 aa24.92■■□□□ 1.58
UBE2D3-215ENST00000503418 WASHC4Q2M389 1173 aa24.92■■□□□ 1.58
UBE2D3-215ENST00000503418 MKRN1Q9UHC7 482 aaKnown RBP24.92■■□□□ 1.58
UBE2D3-215ENST00000503418 CACNA1FO60840 1977 aa24.91■■□□□ 1.58
UBE2D3-215ENST00000503418 MYH3P11055 1940 aa24.91■■□□□ 1.58
UBE2D3-215ENST00000503418 RIMBP2O15034 1052 aa24.91■■□□□ 1.58
UBE2D3-215ENST00000503418 GMPSP49915 693 aaPredicted RBP24.91■■□□□ 1.58
UBE2D3-215ENST00000503418 CWF19L2Q2TBE0 894 aaKnown RBP24.91■■□□□ 1.58
UBE2D3-215ENST00000503418 GPRC5DQ9NZD1 345 aa24.91■■□□□ 1.58
UBE2D3-215ENST00000503418 POLLQ9UGP5 575 aa24.91■■□□□ 1.58
UBE2D3-215ENST00000503418 CDHR2Q9BYE9 1310 aa24.9■■□□□ 1.58
UBE2D3-215ENST00000503418 TMEM88BA6NKF7 163 aa24.9■■□□□ 1.58
UBE2D3-215ENST00000503418 YDJCA8MPS7 323 aa24.9■■□□□ 1.58
UBE2D3-215ENST00000503418 EXOSC9Q06265 439 aaKnown RBP24.9■■□□□ 1.58
UBE2D3-215ENST00000503418 FLIIQ13045 1269 aa24.9■■□□□ 1.58
UBE2D3-215ENST00000503418 TNIP1Q15025 636 aa24.9■■□□□ 1.58
UBE2D3-215ENST00000503418 USP50Q70EL3 339 aaPredicted RBP24.9■■□□□ 1.58
UBE2D3-215ENST00000503418 BCL2L13Q9BXK5 485 aa24.9■■□□□ 1.58
UBE2D3-215ENST00000503418 EYA3Q99504 573 aa24.89■■□□□ 1.58
UBE2D3-215ENST00000503418 DBNDD1Q9H9R9 158 aa24.89■■□□□ 1.58
UBE2D3-215ENST00000503418 ADARB2Q9NS39 739 aaKnown RBP24.89■■□□□ 1.58
UBE2D3-215ENST00000503418 NEURL1BA8MQ27 555 aa24.88■■□□□ 1.57
UBE2D3-215ENST00000503418 CTSWP56202 376 aa24.88■■□□□ 1.57
UBE2D3-215ENST00000503418 FKBP5Q13451 457 aaPredicted RBP24.88■■□□□ 1.57
UBE2D3-215ENST00000503418 GPR101Q96P66 508 aaPredicted RBP24.88■■□□□ 1.57
UBE2D3-215ENST00000503418 ANKIB1Q9P2G1 1089 aa24.88■■□□□ 1.57
UBE2D3-215ENST00000503418 VAMP4O75379 141 aa24.87■■□□□ 1.57
UBE2D3-215ENST00000503418 TBC1D16Q8TBP0 767 aa24.87■■□□□ 1.57
UBE2D3-215ENST00000503418 SPINK5Q9NQ38 1064 aaPredicted RBP24.87■■□□□ 1.57
UBE2D3-215ENST00000503418 PCNTO95613 3336 aa24.87■■□□□ 1.57
UBE2D3-215ENST00000503418 SPEF2Q9C093 1822 aa24.86■■□□□ 1.57
UBE2D3-215ENST00000503418 ANKRD18AQ8IVF6 992 aa24.86■■□□□ 1.57
UBE2D3-215ENST00000503418 CNTNAP1P78357 1384 aa24.85■■□□□ 1.57
UBE2D3-215ENST00000503418 ECE2O60344 883 aa24.85■■□□□ 1.57
UBE2D3-215ENST00000503418 UFL1O94874 794 aa24.85■■□□□ 1.57
UBE2D3-215ENST00000503418 DOK7Q18PE1 504 aa24.85■■□□□ 1.57
UBE2D3-215ENST00000503418 UBE3BQ7Z3V4 1068 aa24.85■■□□□ 1.57
UBE2D3-215ENST00000503418 MYH16Q9H6N6 1097 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms