RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 LDHDQ86WU2 507 aa21■□□□□ 0.95
SCLT1-204ENST00000503215 MPNDQ8N594 471 aa21■□□□□ 0.95
SCLT1-204ENST00000503215 RTFDC1Q9BY42 306 aaPredicted RBP21■□□□□ 0.95
SCLT1-204ENST00000503215 DDX60Q8IY21 1712 aaKnown RBP21■□□□□ 0.95
SCLT1-204ENST00000503215 CCDC30Q5VVM6 783 aa20.99■□□□□ 0.95
SCLT1-204ENST00000503215 DPP8Q6V1X1 898 aaPredicted RBP20.99■□□□□ 0.95
SCLT1-204ENST00000503215 NIM1KQ8IY84 436 aa20.99■□□□□ 0.95
SCLT1-204ENST00000503215 JMYQ8N9B5 988 aa20.99■□□□□ 0.95
SCLT1-204ENST00000503215 TMX4Q9H1E5 349 aaPredicted RBP20.99■□□□□ 0.95
SCLT1-204ENST00000503215 SCN4AP35499 1836 aa20.99■□□□□ 0.95
SCLT1-204ENST00000503215 ITGBL1O95965 494 aaPredicted RBP20.97■□□□□ 0.95
SCLT1-204ENST00000503215 EPS15P42566 896 aa20.97■□□□□ 0.95
SCLT1-204ENST00000503215 SCNN1DP51172 638 aa20.97■□□□□ 0.95
SCLT1-204ENST00000503215 G2E3Q7L622 706 aa20.97■□□□□ 0.95
SCLT1-204ENST00000503215 ZBTB38Q8NAP3 1195 aaPredicted RBP20.97■□□□□ 0.95
SCLT1-204ENST00000503215 CLEC11AQ9Y240 323 aa20.97■□□□□ 0.95
SCLT1-204ENST00000503215 CXCL9Q07325 125 aa20.97■□□□□ 0.95
SCLT1-204ENST00000503215 LTBP1Q14766 1721 aa20.97■□□□□ 0.95
SCLT1-204ENST00000503215 METTL22Q9BUU2 404 aaPredicted RBP20.97■□□□□ 0.95
SCLT1-204ENST00000503215 MAP3K2Q9Y2U5 619 aa20.97■□□□□ 0.95
SCLT1-204ENST00000503215 PASKQ96RG2 1323 aa20.96■□□□□ 0.95
SCLT1-204ENST00000503215 MAP1SQ66K74 1059 aaPredicted RBP20.96■□□□□ 0.95
SCLT1-204ENST00000503215 SEC31BQ9NQW1 1179 aa20.96■□□□□ 0.95
SCLT1-204ENST00000503215 PCNTO95613 3336 aa20.95■□□□□ 0.94
SCLT1-204ENST00000503215 KIAA2012Q0VF49 1180 aa20.95■□□□□ 0.94
SCLT1-204ENST00000503215 TWISTNBQ3B726 338 aaPredicted RBP20.95■□□□□ 0.94
SCLT1-204ENST00000503215 CCDC191Q8NCU4 936 aa20.95■□□□□ 0.94
SCLT1-204ENST00000503215 SUPT20HQ8NEM7 779 aa20.95■□□□□ 0.94
SCLT1-204ENST00000503215 ZNRF3Q9ULT6 936 aa20.95■□□□□ 0.94
SCLT1-204ENST00000503215 PI4KAP2A4QPH2 592 aa20.94■□□□□ 0.94
SCLT1-204ENST00000503215 IGKV5-2P06315 115 aa20.94■□□□□ 0.94
SCLT1-204ENST00000503215 GPSM2P81274 684 aa20.94■□□□□ 0.94
SCLT1-204ENST00000503215 PI4KAP1Q8N8J0 262 aa20.94■□□□□ 0.94
SCLT1-204ENST00000503215 CCDC85AQ96PX6 553 aaPredicted RBP20.94■□□□□ 0.94
SCLT1-204ENST00000503215 VPS33BQ9H267 617 aa20.94■□□□□ 0.94
SCLT1-204ENST00000503215 CWC25Q9NXE8 425 aaPredicted RBP20.94■□□□□ 0.94
SCLT1-204ENST00000503215 DUOX1Q9NRD9 1551 aa20.94■□□□□ 0.94
SCLT1-204ENST00000503215 IL16Q14005 1332 aa20.93■□□□□ 0.94
SCLT1-204ENST00000503215 YDJCA8MPS7 323 aa20.93■□□□□ 0.94
SCLT1-204ENST00000503215 PCCAP05165 728 aaPredicted RBP20.93■□□□□ 0.94
SCLT1-204ENST00000503215 KSR2Q6VAB6 950 aa20.93■□□□□ 0.94
SCLT1-204ENST00000503215 PNMA8AQ86V59 439 aaPredicted RBP20.93■□□□□ 0.94
SCLT1-204ENST00000503215 CNTROBQ8N137 903 aa20.93■□□□□ 0.94
SCLT1-204ENST00000503215 GPR101Q96P66 508 aaPredicted RBP20.93■□□□□ 0.94
SCLT1-204ENST00000503215 SPINK5Q9NQ38 1064 aaPredicted RBP20.93■□□□□ 0.94
SCLT1-204ENST00000503215 CREBZFQ9NS37 354 aa20.93■□□□□ 0.94
SCLT1-204ENST00000503215 POLLQ9UGP5 575 aa20.93■□□□□ 0.94
SCLT1-204ENST00000503215 MKRN1Q9UHC7 482 aaKnown RBP20.93■□□□□ 0.94
SCLT1-204ENST00000503215 NSFL1CQ9UNZ2 370 aaKnown RBP20.93■□□□□ 0.94
SCLT1-204ENST00000503215 ADAMTSL1Q8N6G6 1762 aa20.93■□□□□ 0.94
SCLT1-204ENST00000503215 FANCIQ9NVI1 1328 aa20.92■□□□□ 0.94
SCLT1-204ENST00000503215 RAD17O75943 681 aa20.92■□□□□ 0.94
SCLT1-204ENST00000503215 DDX58O95786 925 aaKnown RBP20.92■□□□□ 0.94
SCLT1-204ENST00000503215 SLC4A2P04920 1241 aa20.92■□□□□ 0.94
SCLT1-204ENST00000503215 RPS8P62241 208 aaKnown RBP20.92■□□□□ 0.94
SCLT1-204ENST00000503215 FMR1Q06787 632 aaKnown RBP eCLIP20.92■□□□□ 0.943e-7■■■■□ 25.7
SCLT1-204ENST00000503215 TMC4Q7Z404 712 aa20.92■□□□□ 0.94
SCLT1-204ENST00000503215 LMOD1P29536 600 aaPredicted RBP20.91■□□□□ 0.94
SCLT1-204ENST00000503215 NCBP3Q53F19 620 aaKnown RBP20.91■□□□□ 0.94
SCLT1-204ENST00000503215 FAM9BQ8IZU0 186 aa20.91■□□□□ 0.94
SCLT1-204ENST00000503215 STK31Q9BXU1 1019 aa20.91■□□□□ 0.94
SCLT1-204ENST00000503215 RIMBP2O15034 1052 aa20.9■□□□□ 0.94
SCLT1-204ENST00000503215 GMPSP49915 693 aaPredicted RBP20.9■□□□□ 0.94
SCLT1-204ENST00000503215 CWF19L2Q2TBE0 894 aaKnown RBP20.9■□□□□ 0.94
SCLT1-204ENST00000503215 GPRC5DQ9NZD1 345 aa20.9■□□□□ 0.94
SCLT1-204ENST00000503215 SHTN1A0MZ66 631 aa20.89■□□□□ 0.93
SCLT1-204ENST00000503215 PDE8AO60658 829 aa20.89■□□□□ 0.93
SCLT1-204ENST00000503215 CHMP4AQ9BY43 222 aa20.89■□□□□ 0.93
SCLT1-204ENST00000503215 LRRC37AA6NMS7 1700 aa20.89■□□□□ 0.93
SCLT1-204ENST00000503215 C6orf229H3BNL8 230 aa20.88■□□□□ 0.93
SCLT1-204ENST00000503215 VAMP4O75379 141 aa20.88■□□□□ 0.93
SCLT1-204ENST00000503215 EXOSC9Q06265 439 aaKnown RBP20.88■□□□□ 0.93
SCLT1-204ENST00000503215 CIAPIN1Q6FI81 312 aa20.88■□□□□ 0.93
SCLT1-204ENST00000503215 WDR63Q8IWG1 891 aa20.88■□□□□ 0.93
SCLT1-204ENST00000503215 DBNDD1Q9H9R9 158 aa20.88■□□□□ 0.93
SCLT1-204ENST00000503215 KCNQ5Q9NR82 932 aa20.88■□□□□ 0.93
SCLT1-204ENST00000503215 DOK7Q18PE1 504 aa20.87■□□□□ 0.93
SCLT1-204ENST00000503215 WASHC4Q2M389 1173 aa20.87■□□□□ 0.93
SCLT1-204ENST00000503215 TMEM88BA6NKF7 163 aa20.86■□□□□ 0.93
SCLT1-204ENST00000503215 NEURL1BA8MQ27 555 aa20.86■□□□□ 0.93
SCLT1-204ENST00000503215 CCDC152Q4G0S7 254 aa20.86■□□□□ 0.93
SCLT1-204ENST00000503215 IFFO2Q5TF58 517 aa20.86■□□□□ 0.93
SCLT1-204ENST00000503215 TBC1D16Q8TBP0 767 aa20.86■□□□□ 0.93
SCLT1-204ENST00000503215 TRAF5O00463 557 aa20.85■□□□□ 0.93
SCLT1-204ENST00000503215 FLIIQ13045 1269 aa20.85■□□□□ 0.93
SCLT1-204ENST00000503215 USP50Q70EL3 339 aaPredicted RBP20.85■□□□□ 0.93
SCLT1-204ENST00000503215 ZBTB12Q9Y330 459 aaPredicted RBP20.85■□□□□ 0.93
SCLT1-204ENST00000503215 CDHR2Q9BYE9 1310 aa20.85■□□□□ 0.93
SCLT1-204ENST00000503215 WTIPA6NIX2 430 aaPredicted RBP20.85■□□□□ 0.93
SCLT1-204ENST00000503215 HIRAP54198 1017 aaPredicted RBP20.85■□□□□ 0.93
SCLT1-204ENST00000503215 BCL2L13Q9BXK5 485 aa20.85■□□□□ 0.93
SCLT1-204ENST00000503215 ADARB2Q9NS39 739 aaKnown RBP20.85■□□□□ 0.93
SCLT1-204ENST00000503215 CNTNAP1P78357 1384 aa20.84■□□□□ 0.93
SCLT1-204ENST00000503215 H7C1W4 665 aa20.84■□□□□ 0.93
SCLT1-204ENST00000503215 PSMD14O00487 310 aa20.84■□□□□ 0.93
SCLT1-204ENST00000503215 HSPA1AP0DMV8 641 aaKnown RBP20.84■□□□□ 0.93
SCLT1-204ENST00000503215 HSPA1BP0DMV9 641 aaKnown RBP20.84■□□□□ 0.93
SCLT1-204ENST00000503215 HSP90B1P14625 803 aaKnown RBP20.84■□□□□ 0.93
SCLT1-204ENST00000503215 CTSWP56202 376 aa20.84■□□□□ 0.93
SCLT1-204ENST00000503215 NEXNQ0ZGT2 675 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms