RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 IDH3AP50213 366 aa8.23□□□□□ -1.09
PROM1-203ENST00000502943 TRPM4Q8TD43 1214 aa8.23□□□□□ -1.09
PROM1-203ENST00000502943 IFT43Q96FT9 208 aa8.23□□□□□ -1.09
PROM1-203ENST00000502943 KLK14Q9P0G3 267 aa8.23□□□□□ -1.09
PROM1-203ENST00000502943 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
PROM1-203ENST00000502943 DLL1O00548 723 aa8.22□□□□□ -1.09
PROM1-203ENST00000502943 EPB42P16452 691 aa8.22□□□□□ -1.09
PROM1-203ENST00000502943 FSTP19883 344 aa8.22□□□□□ -1.09
PROM1-203ENST00000502943 INPP5BP32019 993 aa8.22□□□□□ -1.09
PROM1-203ENST00000502943 HFE2Q6ZVN8 426 aa8.22□□□□□ -1.09
PROM1-203ENST00000502943 SMG9Q9H0W8 520 aaKnown RBP8.22□□□□□ -1.09
PROM1-203ENST00000502943 SASH3O75995 380 aa8.21□□□□□ -1.1
PROM1-203ENST00000502943 SEC13P55735 322 aa8.21□□□□□ -1.1
PROM1-203ENST00000502943 GPLD1P80108 840 aa8.21□□□□□ -1.1
PROM1-203ENST00000502943 TPRNQ4KMQ1 711 aa8.21□□□□□ -1.1
PROM1-203ENST00000502943 DZIP1LQ8IYY4 767 aaKnown RBP8.21□□□□□ -1.1
PROM1-203ENST00000502943 TTC9Q92623 222 aa8.21□□□□□ -1.1
PROM1-203ENST00000502943 AKTIPQ9H8T0 292 aa8.21□□□□□ -1.1
PROM1-203ENST00000502943 RAD21O60216 631 aa8.2□□□□□ -1.1
PROM1-203ENST00000502943 RARAP10276 462 aa8.2□□□□□ -1.1
PROM1-203ENST00000502943 HINFPQ9BQA5 517 aa8.2□□□□□ -1.1
PROM1-203ENST00000502943 COL17A1Q9UMD9 1497 aaPredicted RBP8.19□□□□□ -1.1
PROM1-203ENST00000502943 EIF2AK2P19525 551 aaKnown RBP8.19□□□□□ -1.1
PROM1-203ENST00000502943 ARSDP51689 593 aa8.18□□□□□ -1.1
PROM1-203ENST00000502943 DGKZQ13574 1117 aa8.18□□□□□ -1.1
PROM1-203ENST00000502943 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
PROM1-203ENST00000502943 CD97P48960 835 aa8.17□□□□□ -1.1
PROM1-203ENST00000502943 USP20Q9Y2K6 914 aa8.17□□□□□ -1.1
PROM1-203ENST00000502943 PAX4O43316 350 aa8.16□□□□□ -1.1
PROM1-203ENST00000502943 IGFBP4P22692 258 aa8.16□□□□□ -1.1
PROM1-203ENST00000502943 MRPL18Q9H0U6 180 aaKnown RBP8.16□□□□□ -1.1
PROM1-203ENST00000502943 J3QW42 95 aa8.15□□□□□ -1.1
PROM1-203ENST00000502943 MICAL2O94851 1124 aa8.15□□□□□ -1.1
PROM1-203ENST00000502943 MED26O95402 600 aa8.15□□□□□ -1.1
PROM1-203ENST00000502943 NRLP54845 237 aa8.15□□□□□ -1.1
PROM1-203ENST00000502943 DPYDQ12882 1025 aa8.15□□□□□ -1.1
PROM1-203ENST00000502943 GDF6Q6KF10 455 aaPredicted RBP8.15□□□□□ -1.1
PROM1-203ENST00000502943 AGGF1Q8N302 714 aaeCLIP8.15□□□□□ -1.1
PROM1-203ENST00000502943 PLD4Q96BZ4 506 aa8.15□□□□□ -1.1
PROM1-203ENST00000502943 QTRT2Q9H974 415 aaKnown RBP8.15□□□□□ -1.1
PROM1-203ENST00000502943 UBTFP17480 764 aaKnown RBP8.14□□□□□ -1.11
PROM1-203ENST00000502943 CRTC2Q53ET0 693 aaPredicted RBP8.14□□□□□ -1.11
PROM1-203ENST00000502943 TMEM130Q8N3G9 435 aa8.14□□□□□ -1.11
PROM1-203ENST00000502943 TLR7Q9NYK1 1049 aaKnown RBP8.14□□□□□ -1.11
PROM1-203ENST00000502943 TFIP11Q9UBB9 837 aaKnown RBP8.14□□□□□ -1.11
PROM1-203ENST00000502943 MAFBQ9Y5Q3 323 aaPredicted RBP8.14□□□□□ -1.11
PROM1-203ENST00000502943 TGFB1P01137 390 aa8.13□□□□□ -1.11
PROM1-203ENST00000502943 GLB1P16278 677 aa8.13□□□□□ -1.11
PROM1-203ENST00000502943 IRAK1P51617 712 aa8.13□□□□□ -1.11
PROM1-203ENST00000502943 SETDB1Q15047 1291 aa8.13□□□□□ -1.11
PROM1-203ENST00000502943 LARP1Q6PKG0 1096 aaKnown RBP8.13□□□□□ -1.11
PROM1-203ENST00000502943 Q6ZS46 218 aa8.13□□□□□ -1.11
PROM1-203ENST00000502943 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
PROM1-203ENST00000502943 IL22RA1Q8N6P7 574 aa8.13□□□□□ -1.11
PROM1-203ENST00000502943 C11orf16Q9NQ32 467 aa8.13□□□□□ -1.11
PROM1-203ENST00000502943 OAS3Q9Y6K5 1087 aaKnown RBP8.13□□□□□ -1.11
PROM1-203ENST00000502943 OPLAHO14841 1288 aa8.12□□□□□ -1.11
PROM1-203ENST00000502943 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
PROM1-203ENST00000502943 PTK7Q13308 1070 aa8.12□□□□□ -1.11
PROM1-203ENST00000502943 NSUN5Q96P11 429 aaKnown RBP8.12□□□□□ -1.11
PROM1-203ENST00000502943 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
PROM1-203ENST00000502943 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
PROM1-203ENST00000502943 LOC102724428A0A0B4J2F2 783 aa8.11□□□□□ -1.11
PROM1-203ENST00000502943 TXKP42681 527 aa8.11□□□□□ -1.11
PROM1-203ENST00000502943 SIK1P57059 783 aa8.11□□□□□ -1.11
PROM1-203ENST00000502943 RAXQ9Y2V3 346 aa8.11□□□□□ -1.11
PROM1-203ENST00000502943 PTCD1O75127 700 aaKnown RBP8.1□□□□□ -1.11
PROM1-203ENST00000502943 XYLBO75191 536 aa8.1□□□□□ -1.11
PROM1-203ENST00000502943 IGLV1-40P01703 118 aa8.1□□□□□ -1.11
PROM1-203ENST00000502943 C11orf91Q3C1V1 193 aa8.1□□□□□ -1.11
PROM1-203ENST00000502943 RGL4Q8IZJ4 473 aa8.1□□□□□ -1.11
PROM1-203ENST00000502943 TRIM33Q9UPN9 1127 aa8.1□□□□□ -1.11
PROM1-203ENST00000502943 KIAA1324LA8MWY0 1029 aaPredicted RBP8.09□□□□□ -1.11
PROM1-203ENST00000502943 MMP20O60882 483 aa8.09□□□□□ -1.11
PROM1-203ENST00000502943 EGFRP00533 1210 aa8.09□□□□□ -1.11
PROM1-203ENST00000502943 GHRHP01286 108 aa8.09□□□□□ -1.11
PROM1-203ENST00000502943 PSAPP07602 524 aa8.09□□□□□ -1.11
PROM1-203ENST00000502943 TAL1P17542 331 aaPredicted RBP8.09□□□□□ -1.11
PROM1-203ENST00000502943 GP2P55259 537 aaKnown RBP8.09□□□□□ -1.11
PROM1-203ENST00000502943 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.09□□□□□ -1.11
PROM1-203ENST00000502943 CMTR1Q8N1G2 835 aaKnown RBP8.09□□□□□ -1.11
PROM1-203ENST00000502943 GLMNQ92990 594 aa8.09□□□□□ -1.11
PROM1-203ENST00000502943 UBL7Q96S82 380 aaPredicted RBP8.09□□□□□ -1.11
PROM1-203ENST00000502943 USP17L15C9J2P7 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L10C9JJH3 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L13C9JLJ4 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L12C9JPN9 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L11C9JVI0 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L21D6R901 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L18D6R9N7 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L22D6RA61 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L17D6RBQ6 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L19D6RCP7 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L20D6RJB6 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 SLC24A1O60721 1099 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 COBLO75128 1261 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 USP17L24Q0WX57 530 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 MYO19Q96H55 970 aa8.08□□□□□ -1.12
PROM1-203ENST00000502943 SRA1Q9HD15 236 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms