RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 GDF2Q9UK05 429 aaPredicted RBP9.6□□□□□ -0.87
CRNDE-201ENST00000501177 TIAM1Q13009 1591 aa9.59□□□□□ -0.87
CRNDE-201ENST00000501177 A0A1W2PNR3 127 aa9.59□□□□□ -0.87
CRNDE-201ENST00000501177 GOLGA6L1Q8N7Z2 621 aa9.59□□□□□ -0.87
CRNDE-201ENST00000501177 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.59□□□□□ -0.87
CRNDE-201ENST00000501177 ZNF358Q9NW07 568 aa9.59□□□□□ -0.87
CRNDE-201ENST00000501177 MBD5Q9P267 1494 aa9.59□□□□□ -0.87
CRNDE-201ENST00000501177 XIRP1Q702N8 1843 aaKnown RBP9.59□□□□□ -0.88
CRNDE-201ENST00000501177 DCDC2BA2VCK2 349 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 SLCO4C1Q6ZQN7 724 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 NLRP8Q86W28 1048 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 NFATC2IPQ8NCF5 419 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 ZDHHC1Q8WTX9 485 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 ZIC5Q96T25 663 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 CABP1Q9NZU7 370 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 KLF15Q9UIH9 416 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 NOD1Q9Y239 953 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 CCDC141Q6ZP82 1450 aa9.58□□□□□ -0.88
CRNDE-201ENST00000501177 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
CRNDE-201ENST00000501177 EHBP1L1Q8N3D4 1523 aa9.57□□□□□ -0.88
CRNDE-201ENST00000501177 UBR1Q8IWV7 1749 aa9.57□□□□□ -0.88
CRNDE-201ENST00000501177 USP17L5A8MUK1 530 aa9.57□□□□□ -0.88
CRNDE-201ENST00000501177 ATXN7O15265 892 aaPredicted RBP9.57□□□□□ -0.88
CRNDE-201ENST00000501177 MAPTP10636 758 aaKnown RBP9.57□□□□□ -0.88
CRNDE-201ENST00000501177 COL8A1P27658 744 aa9.57□□□□□ -0.88
CRNDE-201ENST00000501177 TXLNAP40222 546 aa9.57□□□□□ -0.88
CRNDE-201ENST00000501177 TNP2Q05952 138 aa9.57□□□□□ -0.88
CRNDE-201ENST00000501177 ARSJQ5FYB0 599 aaPredicted RBP9.57□□□□□ -0.88
CRNDE-201ENST00000501177 FIGNL1Q6PIW4 674 aa9.57□□□□□ -0.88
CRNDE-201ENST00000501177 RGS17Q9UGC6 210 aaPredicted RBP9.57□□□□□ -0.88
CRNDE-201ENST00000501177 MTUS2Q5JR59 1369 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 CD33P20138 364 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 EPHA4P54764 986 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 NBPF1Q3BBV0 1214 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 LINC00114Q6XXX2 140 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 SPOCK3Q9BQ16 436 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 RRAGCQ9HB90 399 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 ZDHHC3Q9NYG2 299 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 SCHIP1Q9P0W5 487 aaPredicted RBP9.56□□□□□ -0.88
CRNDE-201ENST00000501177 EIF2AK4Q9P2K8 1649 aaKnown RBP9.56□□□□□ -0.88
CRNDE-201ENST00000501177 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
CRNDE-201ENST00000501177 SCAF11Q99590 1463 aaKnown RBP9.55□□□□□ -0.88
CRNDE-201ENST00000501177 KRBA1A5PL33 1030 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 NEURL1BA8MQ27 555 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 KIF3BO15066 747 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 PROCP04070 461 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 EPXP11678 715 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 PSME1Q06323 249 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 TBCELQ5QJ74 424 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 UCN2Q96RP3 112 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 SUV39H2Q9H5I1 410 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 KIAA1024Q9UPX6 916 aa9.55□□□□□ -0.88
CRNDE-201ENST00000501177 LRRC9Q6ZRR7 1453 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 KHNYNO15037 678 aaKnown RBP9.54□□□□□ -0.88
CRNDE-201ENST00000501177 ARAFP10398 606 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 BTBD6Q96KE9 485 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 STRN4Q9NRL3 753 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 MKL2Q9ULH7 1088 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 ABCC3O15438 1527 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 SLIT1O75093 1534 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 CEP162Q5TB80 1403 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 ARHGEF5Q12774 1597 aa9.54□□□□□ -0.88
CRNDE-201ENST00000501177 SETD1AO15047 1707 aaKnown RBP9.53□□□□□ -0.88
CRNDE-201ENST00000501177 ERVK-7P63135 1459 aa9.53□□□□□ -0.88
CRNDE-201ENST00000501177 ROBO1Q9Y6N7 1651 aa9.53□□□□□ -0.88
CRNDE-201ENST00000501177 MSTNO14793 375 aa9.53□□□□□ -0.88
CRNDE-201ENST00000501177 ZBTB7BO15156 539 aaPredicted RBP9.53□□□□□ -0.88
CRNDE-201ENST00000501177 LZTS3O60299 673 aaPredicted RBP9.53□□□□□ -0.88
CRNDE-201ENST00000501177 TATP17735 454 aaPredicted RBP9.53□□□□□ -0.88
CRNDE-201ENST00000501177 SH3PXD2AQ5TCZ1 1133 aa9.53□□□□□ -0.88
CRNDE-201ENST00000501177 TNS4Q8IZW8 715 aa9.53□□□□□ -0.88
CRNDE-201ENST00000501177 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
CRNDE-201ENST00000501177 KDM5AP29375 1690 aaKnown RBP9.52□□□□□ -0.89
CRNDE-201ENST00000501177 BACH1O14867 736 aa9.52□□□□□ -0.89
CRNDE-201ENST00000501177 AMPD1P23109 780 aa9.52□□□□□ -0.89
CRNDE-201ENST00000501177 CLDN10P78369 228 aa9.52□□□□□ -0.89
CRNDE-201ENST00000501177 FCHSD1Q86WN1 690 aa9.52□□□□□ -0.89
CRNDE-201ENST00000501177 L3MBTL2Q969R5 705 aa9.52□□□□□ -0.89
CRNDE-201ENST00000501177 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.89
CRNDE-201ENST00000501177 CAMSAP2Q08AD1 1489 aa9.52□□□□□ -0.89
CRNDE-201ENST00000501177 RAD21O60216 631 aa9.51□□□□□ -0.89
CRNDE-201ENST00000501177 FAM157BP0CG42 384 aa9.51□□□□□ -0.89
CRNDE-201ENST00000501177 FAM182BQ5T319 152 aa9.51□□□□□ -0.89
CRNDE-201ENST00000501177 SLC9A9Q8IVB4 645 aa9.51□□□□□ -0.89
CRNDE-201ENST00000501177 C7orf43Q8WVR3 580 aa9.51□□□□□ -0.89
CRNDE-201ENST00000501177 CEP152O94986 1710 aa9.51□□□□□ -0.89
CRNDE-201ENST00000501177 MAST1Q9Y2H9 1570 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 USP17L3A6NCW0 530 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 USP17L4A6NCW7 530 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 EFSO43281 561 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 NOS2P35228 1153 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 DGKGP49619 791 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 GRIN2CQ14957 1233 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 TEAD4Q15561 434 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 HDGFL1Q5TGJ6 251 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 USP17L2Q6R6M4 530 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 POTEAQ6S8J7 498 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 USP17L1Q7RTZ2 530 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
CRNDE-201ENST00000501177 ZNF644Q9H582 1327 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms