RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 HYPKQ9NX55 129 aa14.32□□□□□ -0.12
LSAMP-206ENST00000498645 CNTNAP1P78357 1384 aa14.32□□□□□ -0.12
LSAMP-206ENST00000498645 SP8Q8IXZ3 490 aa14.31□□□□□ -0.12
LSAMP-206ENST00000498645 LRRC37AA6NMS7 1700 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 CAPN15O75808 1086 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 GNAI1P63096 354 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
LSAMP-206ENST00000498645 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 RIC3Q7Z5B4 369 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 TNS4Q8IZW8 715 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 ISCA1Q9BUE6 129 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 RTFDC1Q9BY42 306 aaPredicted RBP14.3□□□□□ -0.12
LSAMP-206ENST00000498645 IFT57Q9NWB7 429 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 ZNRF3Q9ULT6 936 aa14.3□□□□□ -0.12
LSAMP-206ENST00000498645 RAD17O75943 681 aa14.29□□□□□ -0.12
LSAMP-206ENST00000498645 ZNF853P0CG23 659 aa14.29□□□□□ -0.12
LSAMP-206ENST00000498645 CXCL9Q07325 125 aa14.29□□□□□ -0.12
LSAMP-206ENST00000498645 VPS33BQ9H267 617 aa14.29□□□□□ -0.12
LSAMP-206ENST00000498645 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
LSAMP-206ENST00000498645 ABT1Q9ULW3 272 aaKnown RBP14.29□□□□□ -0.12
LSAMP-206ENST00000498645 DUOX1Q9NRD9 1551 aa14.29□□□□□ -0.12
LSAMP-206ENST00000498645 COL4A1P02462 1669 aa14.29□□□□□ -0.12
LSAMP-206ENST00000498645 TRPM7Q96QT4 1865 aa14.29□□□□□ -0.12
LSAMP-206ENST00000498645 IRS4O14654 1257 aaPredicted RBP14.28□□□□□ -0.12
LSAMP-206ENST00000498645 VEGFBP49765 207 aa14.28□□□□□ -0.12
LSAMP-206ENST00000498645 GMPSP49915 693 aaPredicted RBP14.28□□□□□ -0.12
LSAMP-206ENST00000498645 KIAA2012Q0VF49 1180 aa14.28□□□□□ -0.12
LSAMP-206ENST00000498645 CELF1Q92879 486 aaKnown RBP14.28□□□□□ -0.12
LSAMP-206ENST00000498645 GPRC5DQ9NZD1 345 aa14.28□□□□□ -0.12
LSAMP-206ENST00000498645 FMR1Q06787 632 aaKnown RBP eCLIP14.27□□□□□ -0.13
LSAMP-206ENST00000498645 CIAPIN1Q6FI81 312 aa14.27□□□□□ -0.13
LSAMP-206ENST00000498645 USP50Q70EL3 339 aaPredicted RBP14.27□□□□□ -0.13
LSAMP-206ENST00000498645 TMC4Q7Z404 712 aa14.27□□□□□ -0.13
LSAMP-206ENST00000498645 C8orf58Q8NAV2 365 aa14.27□□□□□ -0.13
LSAMP-206ENST00000498645 MYD88Q99836 296 aa14.27□□□□□ -0.13
LSAMP-206ENST00000498645 BCL2L13Q9BXK5 485 aa14.27□□□□□ -0.13
LSAMP-206ENST00000498645 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.13
LSAMP-206ENST00000498645 C6orf229H3BNL8 230 aa14.26□□□□□ -0.13
LSAMP-206ENST00000498645 TRAF5O00463 557 aa14.26□□□□□ -0.13
LSAMP-206ENST00000498645 TNIP1Q15025 636 aa14.26□□□□□ -0.13
LSAMP-206ENST00000498645 DEFB115Q30KQ5 88 aa14.26□□□□□ -0.13
LSAMP-206ENST00000498645 PAXIP1Q6ZW49 1069 aaPredicted RBP14.26□□□□□ -0.13
LSAMP-206ENST00000498645 ADARB2Q9NS39 739 aaKnown RBP14.26□□□□□ -0.13
LSAMP-206ENST00000498645 RIMBP2O15034 1052 aa14.25□□□□□ -0.13
LSAMP-206ENST00000498645 FOXN1O15353 648 aa14.25□□□□□ -0.13
LSAMP-206ENST00000498645 GRM1Q13255 1194 aa14.25□□□□□ -0.13
LSAMP-206ENST00000498645 SF3B3Q15393 1217 aaKnown RBP14.25□□□□□ -0.13
LSAMP-206ENST00000498645 WASHC4Q2M389 1173 aa14.25□□□□□ -0.13
LSAMP-206ENST00000498645 CCDC184Q52MB2 194 aa14.25□□□□□ -0.13
LSAMP-206ENST00000498645 JARID2Q92833 1246 aaPredicted RBP14.25□□□□□ -0.13
LSAMP-206ENST00000498645 TSR2Q969E8 191 aaKnown RBP14.25□□□□□ -0.13
LSAMP-206ENST00000498645 AIDAQ96BJ3 306 aa14.25□□□□□ -0.13
LSAMP-206ENST00000498645 YDJCA8MPS7 323 aa14.24□□□□□ -0.13
LSAMP-206ENST00000498645 GPSM2P81274 684 aa14.24□□□□□ -0.13
LSAMP-206ENST00000498645 CCDC30Q5VVM6 783 aa14.24□□□□□ -0.13
LSAMP-206ENST00000498645 TSPYL6Q8N831 410 aa14.24□□□□□ -0.13
LSAMP-206ENST00000498645 ZBTB38Q8NAP3 1195 aaPredicted RBP14.24□□□□□ -0.13
LSAMP-206ENST00000498645 GPR101Q96P66 508 aaPredicted RBP14.24□□□□□ -0.13
LSAMP-206ENST00000498645 CCDC85AQ96PX6 553 aaPredicted RBP14.24□□□□□ -0.13
LSAMP-206ENST00000498645 DBNDD1Q9H9R9 158 aa14.24□□□□□ -0.13
LSAMP-206ENST00000498645 SPEF2Q9C093 1822 aa14.23□□□□□ -0.13
LSAMP-206ENST00000498645 SHTN1A0MZ66 631 aa14.23□□□□□ -0.13
LSAMP-206ENST00000498645 RASSF10A6NK89 507 aa14.23□□□□□ -0.13
LSAMP-206ENST00000498645 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
LSAMP-206ENST00000498645 TRIM28Q13263 835 aaKnown RBP14.23□□□□□ -0.13
LSAMP-206ENST00000498645 SEC31BQ9NQW1 1179 aa14.23□□□□□ -0.13
LSAMP-206ENST00000498645 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
LSAMP-206ENST00000498645 HSP90B1P14625 803 aaKnown RBP14.22□□□□□ -0.13
LSAMP-206ENST00000498645 RPS8P62241 208 aaKnown RBP14.22□□□□□ -0.13
LSAMP-206ENST00000498645 DOK7Q18PE1 504 aa14.22□□□□□ -0.13
LSAMP-206ENST00000498645 TRPM4Q8TD43 1214 aa14.22□□□□□ -0.13
LSAMP-206ENST00000498645 GLIS2Q9BZE0 524 aaPredicted RBP14.22□□□□□ -0.13
LSAMP-206ENST00000498645 ZNF408Q9H9D4 720 aa14.22□□□□□ -0.13
LSAMP-206ENST00000498645 CWC25Q9NXE8 425 aaPredicted RBP14.22□□□□□ -0.13
LSAMP-206ENST00000498645 POLLQ9UGP5 575 aa14.22□□□□□ -0.13
LSAMP-206ENST00000498645 CNOT7Q9UIV1 285 aaKnown RBP14.22□□□□□ -0.13
LSAMP-206ENST00000498645 MAP3K2Q9Y2U5 619 aa14.22□□□□□ -0.13
LSAMP-206ENST00000498645 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
LSAMP-206ENST00000498645 MYH3P11055 1940 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 CDHR2Q9BYE9 1310 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 PSMD14O00487 310 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 ECE2O60344 883 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 PCCAP05165 728 aaPredicted RBP14.21□□□□□ -0.13
LSAMP-206ENST00000498645 CCDC152Q4G0S7 254 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 MICALL2Q8IY33 904 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 CCDC191Q8NCU4 936 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 EYA3Q99504 573 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 METTL22Q9BUU2 404 aaPredicted RBP14.21□□□□□ -0.13
LSAMP-206ENST00000498645 STK31Q9BXU1 1019 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 ANKIB1Q9P2G1 1089 aa14.21□□□□□ -0.13
LSAMP-206ENST00000498645 G3V3G9 751 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 H7C1D1 291 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 PDE8AO60658 829 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 UFL1O94874 794 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 CELF2O95319 508 aaKnown RBP14.2□□□□□ -0.14
LSAMP-206ENST00000498645 CTCFP49711 727 aaPredicted RBP14.2□□□□□ -0.14
LSAMP-206ENST00000498645 DCAF8Q5TAQ9 597 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 CST9Q5W186 159 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 CYP4F22Q6NT55 531 aa14.2□□□□□ -0.14
LSAMP-206ENST00000498645 TBC1D16Q8TBP0 767 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms