RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 MKRN1Q9UHC7 482 aaKnown RBP29.25■■■□□ 2.27
CDKN2A-208ENST00000498124 CLEC11AQ9Y240 323 aa29.25■■■□□ 2.27
CDKN2A-208ENST00000498124 MAP1SQ66K74 1059 aaPredicted RBP29.24■■■□□ 2.27
CDKN2A-208ENST00000498124 DPP8Q6V1X1 898 aaPredicted RBP29.24■■■□□ 2.27
CDKN2A-208ENST00000498124 CNTNAP1P78357 1384 aa29.24■■■□□ 2.27
CDKN2A-208ENST00000498124 HSPA1AP0DMV8 641 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 HSPA1BP0DMV9 641 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 EPS15P42566 896 aa29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 CALD1Q05682 793 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 TRIM28Q13263 835 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 COL13A1Q5TAT6 717 aaPredicted RBP29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 C8orf58Q8NAV2 365 aa29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 TMX4Q9H1E5 349 aaPredicted RBP29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 PHAXQ9H814 394 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 MRS2Q9HD23 443 aa29.23■■■□□ 2.27
CDKN2A-208ENST00000498124 ELL2O00472 640 aaPredicted RBP29.22■■■□□ 2.27
CDKN2A-208ENST00000498124 SF3B3Q15393 1217 aaKnown RBP29.22■■■□□ 2.27
CDKN2A-208ENST00000498124 MPNDQ8N594 471 aa29.22■■■□□ 2.27
CDKN2A-208ENST00000498124 SUPT20HQ8NEM7 779 aa29.22■■■□□ 2.27
CDKN2A-208ENST00000498124 KIAA2012Q0VF49 1180 aa29.21■■■□□ 2.27
CDKN2A-208ENST00000498124 CNTROBQ8N137 903 aa29.21■■■□□ 2.27
CDKN2A-208ENST00000498124 ZNRF3Q9ULT6 936 aa29.21■■■□□ 2.27
CDKN2A-208ENST00000498124 LMOD1P29536 600 aaPredicted RBP29.2■■■□□ 2.26
CDKN2A-208ENST00000498124 CXCL9Q07325 125 aa29.2■■■□□ 2.26
CDKN2A-208ENST00000498124 CELF1Q92879 486 aaKnown RBP29.2■■■□□ 2.26
CDKN2A-208ENST00000498124 TMEM88BA6NKF7 163 aa29.19■■■□□ 2.26
CDKN2A-208ENST00000498124 GOLGA2Q08379 1002 aa29.18■■■□□ 2.26
CDKN2A-208ENST00000498124 RTL5Q5HYW3 569 aaPredicted RBP29.18■■■□□ 2.26
CDKN2A-208ENST00000498124 TMC4Q7Z404 712 aa29.18■■■□□ 2.26
CDKN2A-208ENST00000498124 RIC3Q7Z5B4 369 aa29.17■■■□□ 2.26
CDKN2A-208ENST00000498124 IRS4O14654 1257 aaPredicted RBP29.16■■■□□ 2.26
CDKN2A-208ENST00000498124 TSPYL6Q8N831 410 aa29.16■■■□□ 2.26
CDKN2A-208ENST00000498124 GPRC5DQ9NZD1 345 aa29.16■■■□□ 2.26
CDKN2A-208ENST00000498124 USP50Q70EL3 339 aaPredicted RBP29.15■■■□□ 2.26
CDKN2A-208ENST00000498124 YDJCA8MPS7 323 aa29.14■■■□□ 2.26
CDKN2A-208ENST00000498124 ZBTB38Q8NAP3 1195 aaPredicted RBP29.14■■■□□ 2.26
CDKN2A-208ENST00000498124 MYD88Q99836 296 aa29.14■■■□□ 2.26
CDKN2A-208ENST00000498124 GMPSP49915 693 aaPredicted RBP29.13■■■□□ 2.25
CDKN2A-208ENST00000498124 TSR2Q969E8 191 aaKnown RBP29.13■■■□□ 2.25
CDKN2A-208ENST00000498124 VEGFBP49765 207 aa29.12■■■□□ 2.25
CDKN2A-208ENST00000498124 FMR1Q06787 632 aaKnown RBP eCLIP29.12■■■□□ 2.25
CDKN2A-208ENST00000498124 CCDC27Q2M243 656 aa29.12■■■□□ 2.25
CDKN2A-208ENST00000498124 CIAPIN1Q6FI81 312 aa29.12■■■□□ 2.25
CDKN2A-208ENST00000498124 ADARB2Q9NS39 739 aaKnown RBP29.12■■■□□ 2.25
CDKN2A-208ENST00000498124 RAD17O75943 681 aa29.11■■■□□ 2.25
CDKN2A-208ENST00000498124 RASSF10A6NK89 507 aa29.1■■■□□ 2.25
CDKN2A-208ENST00000498124 CCER2I3L3R5 266 aa29.1■■■□□ 2.25
CDKN2A-208ENST00000498124 GPSM2P81274 684 aa29.1■■■□□ 2.25
CDKN2A-208ENST00000498124 CCDC30Q5VVM6 783 aa29.1■■■□□ 2.25
CDKN2A-208ENST00000498124 CCDC191Q8NCU4 936 aa29.1■■■□□ 2.25
CDKN2A-208ENST00000498124 CDHR2Q9BYE9 1310 aa29.1■■■□□ 2.25
CDKN2A-208ENST00000498124 WWC1Q8IX03 1113 aa29.09■■■□□ 2.25
CDKN2A-208ENST00000498124 METTL22Q9BUU2 404 aaPredicted RBP29.09■■■□□ 2.25
CDKN2A-208ENST00000498124 POLLQ9UGP5 575 aa29.09■■■□□ 2.25
CDKN2A-208ENST00000498124 NSFL1CQ9UNZ2 370 aaKnown RBP29.09■■■□□ 2.25
CDKN2A-208ENST00000498124 PCCAP05165 728 aaPredicted RBP29.08■■■□□ 2.25
CDKN2A-208ENST00000498124 SEC31BQ9NQW1 1179 aa29.08■■■□□ 2.25
CDKN2A-208ENST00000498124 TRPM7Q96QT4 1865 aa29.08■■■□□ 2.25
CDKN2A-208ENST00000498124 TRAF5O00463 557 aa29.07■■■□□ 2.24
CDKN2A-208ENST00000498124 RPS8P62241 208 aaKnown RBP29.07■■■□□ 2.24
CDKN2A-208ENST00000498124 JARID2Q92833 1246 aaPredicted RBP29.07■■■□□ 2.24
CDKN2A-208ENST00000498124 CWC25Q9NXE8 425 aaPredicted RBP29.07■■■□□ 2.24
CDKN2A-208ENST00000498124 THSD7BQ9C0I4 1608 aa29.06■■■□□ 2.24
CDKN2A-208ENST00000498124 SHTN1A0MZ66 631 aa29.06■■■□□ 2.24
CDKN2A-208ENST00000498124 TNIP1Q15025 636 aa29.06■■■□□ 2.24
CDKN2A-208ENST00000498124 WASHC4Q2M389 1173 aa29.06■■■□□ 2.24
CDKN2A-208ENST00000498124 MAP3K2Q9Y2U5 619 aa29.06■■■□□ 2.24
CDKN2A-208ENST00000498124 GPR101Q96P66 508 aaPredicted RBP29.05■■■□□ 2.24
CDKN2A-208ENST00000498124 DBNDD1Q9H9R9 158 aa29.05■■■□□ 2.24
CDKN2A-208ENST00000498124 DDX58O95786 925 aaKnown RBP29.04■■■□□ 2.24
CDKN2A-208ENST00000498124 IGKV5-2P06315 115 aa29.04■■■□□ 2.24
CDKN2A-208ENST00000498124 HIRAP54198 1017 aaPredicted RBP29.04■■■□□ 2.24
CDKN2A-208ENST00000498124 CST9Q5W186 159 aa29.04■■■□□ 2.24
CDKN2A-208ENST00000498124 TBC1D16Q8TBP0 767 aa29.04■■■□□ 2.24
CDKN2A-208ENST00000498124 TRPM4Q8TD43 1214 aa29.04■■■□□ 2.24
CDKN2A-208ENST00000498124 FOXN1O15353 648 aa29.03■■■□□ 2.24
CDKN2A-208ENST00000498124 DEFB115Q30KQ5 88 aa29.03■■■□□ 2.24
CDKN2A-208ENST00000498124 TNS4Q8IZW8 715 aa29.03■■■□□ 2.24
CDKN2A-208ENST00000498124 BCL2L13Q9BXK5 485 aa29.03■■■□□ 2.24
CDKN2A-208ENST00000498124 CHMP4AQ9BY43 222 aa29.03■■■□□ 2.24
CDKN2A-208ENST00000498124 PGAP2Q9UHJ9 254 aa29.03■■■□□ 2.24
CDKN2A-208ENST00000498124 ABT1Q9ULW3 272 aaKnown RBP29.03■■■□□ 2.24
CDKN2A-208ENST00000498124 SCN9AQ15858 1988 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 RTL9Q8NET4 1388 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 IL16Q14005 1332 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 PI4KAP2A4QPH2 592 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 C6orf229H3BNL8 230 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 RIMBP2O15034 1052 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 PDE8AO60658 829 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 NCBP3Q53F19 620 aaKnown RBP29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 KSR2Q6VAB6 950 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 MIER1Q8N108 512 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 PI4KAP1Q8N8J0 262 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 PODXL2Q9NZ53 605 aa29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 ZBTB12Q9Y330 459 aaPredicted RBP29.02■■■□□ 2.24
CDKN2A-208ENST00000498124 PSMD14O00487 310 aa29.01■■■□□ 2.23
CDKN2A-208ENST00000498124 HSP90B1P14625 803 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-208ENST00000498124 TWISTNBQ3B726 338 aaPredicted RBP29.01■■■□□ 2.23
CDKN2A-208ENST00000498124 G2E3Q7L622 706 aa29.01■■■□□ 2.23
CDKN2A-208ENST00000498124 CCDC152Q4G0S7 254 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms