RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 SLC4A3P48751 1232 aa21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 RBM6P78332 1123 aaKnown RBP21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 IFIT5Q13325 482 aaKnown RBP21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 PARP10Q53GL7 1025 aa21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 TAF7LQ5H9L4 462 aa21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 CNTROBQ8N137 903 aa21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 UTP14AQ9BVJ6 771 aaKnown RBP21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 PUS3Q9BZE2 481 aaKnown RBP21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 PDE8AO60658 829 aa21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 RPS6KA4O75676 772 aa21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 IL15P40933 162 aaPredicted RBP21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 DBNLQ9UJU6 430 aaKnown RBP21.73■■□□□ 1.07
CHRNA4-206ENST00000498043 CIAO1O76071 339 aa21.72■■□□□ 1.07
CHRNA4-206ENST00000498043 TRIM37O94972 964 aa21.72■■□□□ 1.07
CHRNA4-206ENST00000498043 CHMLP26374 656 aa21.72■■□□□ 1.07
CHRNA4-206ENST00000498043 ERICH6Q7L0X2 663 aa21.72■■□□□ 1.07
CHRNA4-206ENST00000498043 AMIGO3Q86WK7 504 aa21.72■■□□□ 1.07
CHRNA4-206ENST00000498043 EIF5BO60841 1220 aaKnown RBP21.71■■□□□ 1.07
CHRNA4-206ENST00000498043 HCLS1P14317 486 aaPredicted RBP21.71■■□□□ 1.07
CHRNA4-206ENST00000498043 ITGA6P23229 1130 aa21.71■■□□□ 1.07
CHRNA4-206ENST00000498043 ZNF609O15014 1411 aa21.71■■□□□ 1.07
CHRNA4-206ENST00000498043 NTSR2O95665 410 aa21.71■■□□□ 1.07
CHRNA4-206ENST00000498043 CLEC4GQ6UXB4 293 aa21.71■■□□□ 1.07
CHRNA4-206ENST00000498043 DAXXQ9UER7 740 aaPredicted RBP21.71■■□□□ 1.07
CHRNA4-206ENST00000498043 RTCBQ9Y3I0 505 aaKnown RBP21.71■■□□□ 1.07
CHRNA4-206ENST00000498043 ESYT1Q9BSJ8 1104 aa21.7■■□□□ 1.06
CHRNA4-206ENST00000498043 LRRC4BQ9NT99 713 aa21.7■■□□□ 1.06
CHRNA4-206ENST00000498043 SRP68Q9UHB9 627 aaKnown RBP21.7■■□□□ 1.06
CHRNA4-206ENST00000498043 USPL1Q5W0Q7 1092 aa21.7■■□□□ 1.06
CHRNA4-206ENST00000498043 DBNDD2Q9BQY9 259 aa21.7■■□□□ 1.06
CHRNA4-206ENST00000498043 REC8O95072 547 aa21.69■■□□□ 1.06
CHRNA4-206ENST00000498043 LRP5O75197 1615 aa21.69■■□□□ 1.06
CHRNA4-206ENST00000498043 ANKRD18BA2A2Z9 1011 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 PHF14O94880 888 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 BICDL1Q6ZP65 573 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 AK7Q96M32 723 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 BOLA2Q9H3K6 86 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 BCL2L12Q9HB09 334 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 NARFQ9UHQ1 456 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 RIC1Q4ADV7 1423 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 CASZ1Q86V15 1759 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 USP26Q9BXU7 913 aa21.68■■□□□ 1.06
CHRNA4-206ENST00000498043 COL24A1Q17RW2 1714 aa21.67■■□□□ 1.06
CHRNA4-206ENST00000498043 TBC1D9BQ66K14 1250 aa21.67■■□□□ 1.06
CHRNA4-206ENST00000498043 ZPR1O75312 459 aa21.67■■□□□ 1.06
CHRNA4-206ENST00000498043 NEUROD6Q96NK8 337 aa21.67■■□□□ 1.06
CHRNA4-206ENST00000498043 FBXO3Q9UK99 471 aa21.67■■□□□ 1.06
CHRNA4-206ENST00000498043 SPEF2Q9C093 1822 aa21.67■■□□□ 1.06
CHRNA4-206ENST00000498043 IL25Q9H293 177 aa21.66■■□□□ 1.06
CHRNA4-206ENST00000498043 GPR108Q9NPR9 543 aa21.66■■□□□ 1.06
CHRNA4-206ENST00000498043 CEP126Q9P2H0 1117 aa21.66■■□□□ 1.06
CHRNA4-206ENST00000498043 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
CHRNA4-206ENST00000498043 TIMM10P62072 90 aa21.65■■□□□ 1.06
CHRNA4-206ENST00000498043 BECN1Q14457 450 aa21.65■■□□□ 1.06
CHRNA4-206ENST00000498043 ARHGEF1Q92888 912 aaKnown RBP21.65■■□□□ 1.06
CHRNA4-206ENST00000498043 EVI5LQ96CN4 794 aa21.65■■□□□ 1.06
CHRNA4-206ENST00000498043 KIF2CQ99661 725 aa21.65■■□□□ 1.06
CHRNA4-206ENST00000498043 A0A1B0GUL7 405 aa21.65■■□□□ 1.06
CHRNA4-206ENST00000498043 LDHAL6AQ6ZMR3 332 aa21.65■■□□□ 1.06
CHRNA4-206ENST00000498043 ATP5JP18859 108 aa21.64■■□□□ 1.05
CHRNA4-206ENST00000498043 RGL2O15211 777 aa21.64■■□□□ 1.05
CHRNA4-206ENST00000498043 ANO2Q9NQ90 1003 aa21.64■■□□□ 1.05
CHRNA4-206ENST00000498043 CNNM1Q9NRU3 951 aa21.64■■□□□ 1.05
CHRNA4-206ENST00000498043 ERFEQ4G0M1 354 aa21.63■■□□□ 1.05
CHRNA4-206ENST00000498043 METTL24Q5JXM2 366 aa21.63■■□□□ 1.05
CHRNA4-206ENST00000498043 TBC1D2Q9BYX2 928 aa21.63■■□□□ 1.05
CHRNA4-206ENST00000498043 DIAPH3Q9NSV4 1193 aa21.63■■□□□ 1.05
CHRNA4-206ENST00000498043 NDUFB9Q9Y6M9 179 aa21.63■■□□□ 1.05
CHRNA4-206ENST00000498043 RXRBP28702 533 aa21.62■■□□□ 1.05
CHRNA4-206ENST00000498043 CWC27Q6UX04 472 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-206ENST00000498043 EDC3Q96F86 508 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-206ENST00000498043 HSP90B1P14625 803 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-206ENST00000498043 RFC4P35249 363 aa21.62■■□□□ 1.05
CHRNA4-206ENST00000498043 SLC27A3Q5K4L6 730 aa21.62■■□□□ 1.05
CHRNA4-206ENST00000498043 TRAPPC3LQ5T215 181 aa21.62■■□□□ 1.05
CHRNA4-206ENST00000498043 RIPOR2Q9Y4F9 1068 aa21.62■■□□□ 1.05
CHRNA4-206ENST00000498043 ABCC12Q96J65 1359 aa21.61■■□□□ 1.05
CHRNA4-206ENST00000498043 CCDC152Q4G0S7 254 aa21.61■■□□□ 1.05
CHRNA4-206ENST00000498043 DNAJC2Q99543 621 aaKnown RBP21.61■■□□□ 1.05
CHRNA4-206ENST00000498043 FSD1Q9BTV5 496 aa21.61■■□□□ 1.05
CHRNA4-206ENST00000498043 SEC31BQ9NQW1 1179 aa21.61■■□□□ 1.05
CHRNA4-206ENST00000498043 SETDB2Q96T68 719 aa21.6■■□□□ 1.05
CHRNA4-206ENST00000498043 AKAP2Q9Y2D5 859 aa21.6■■□□□ 1.05
CHRNA4-206ENST00000498043 COL4A1P02462 1669 aa21.6■■□□□ 1.05
CHRNA4-206ENST00000498043 SGSM2O43147 1006 aa21.6■■□□□ 1.05
CHRNA4-206ENST00000498043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.59■■□□□ 1.05
CHRNA4-206ENST00000498043 GTF2E1P29083 439 aaPredicted RBP21.59■■□□□ 1.05
CHRNA4-206ENST00000498043 ADORA1P30542 326 aa21.59■■□□□ 1.05
CHRNA4-206ENST00000498043 C3orf67Q6ZVT6 689 aa21.59■■□□□ 1.05
CHRNA4-206ENST00000498043 HAUS7Q99871 368 aa21.59■■□□□ 1.05
CHRNA4-206ENST00000498043 RTL9Q8NET4 1388 aa21.58■■□□□ 1.05
CHRNA4-206ENST00000498043 ATP2B3Q16720 1220 aa21.58■■□□□ 1.05
CHRNA4-206ENST00000498043 NBPF5PQ86XG9 351 aaPredicted RBP21.58■■□□□ 1.05
CHRNA4-206ENST00000498043 TXNRD1Q16881 649 aa21.57■■□□□ 1.04
CHRNA4-206ENST00000498043 VGLL2Q8N8G2 317 aa21.57■■□□□ 1.04
CHRNA4-206ENST00000498043 XAGE2Q96GT9 111 aa21.57■■□□□ 1.04
CHRNA4-206ENST00000498043 NYXQ9GZU5 481 aa21.57■■□□□ 1.04
CHRNA4-206ENST00000498043 MPHOSPH8Q99549 860 aa21.57■■□□□ 1.04
CHRNA4-206ENST00000498043 ARAP2Q8WZ64 1704 aa21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 ADRA2BP18089 450 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms